Agelaius tricolor (tricolored blackbird): 139591572
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Entry
139591572 CDS
T10815
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
atrc00535
]
139591572 (NYX)
Proteoglycans [BR:
atrc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
139591572 (NYX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
DUF5886
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
139591572
NCBI-ProteinID:
XP_071286387
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MTEDETRLYSSCVLLDPLSLLARPEMPVENNQVILWVPQVHGAWACVRSCPPSCVCSPER
SCSVRCDRAGLGQIPSEFPCEASSINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFIT
PGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVRLDLADCNLFNIPDRIFIELPALQ
ELFCFQNNFRRIPGAIRGMENLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNKINVIH
ERAFQGCQRMEYLYLNDNLIAELPENSFDGLRHLKMLNLGGNFLRNISNTWFRDLGELEF
LYLDRNRISYIEEGAFENLTSLVALHLNSNNLTTLPFSVFEPVYFLGRLYLFRNPWECDC
RLEWLKEWMENYRLVRDIPCASPSSVAGVDLTDVLFERSPEGFCLDPEELNVTSERPTPS
EEPWSTTESKFNSLISKLLLQMGLPEEVANATEVYSNSTQPDGQTEGVSSGGGEDRTEAD
SCSLYLPALLAVIVLLCK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggatgaaacccgtctctattcttcctgtgtgcttttagatcccttaagtttg
cttgccagacctgaaatgccagtagagaataatcaagtgatcctttgggtcccacaggtg
cacggggcgtgggcctgcgtgcgctcctgccctcccagctgtgtgtgctccccggagagg
agctgctccgtgcgctgcgaccgcgccgggctgggccagatccccagcgagttcccctgc
gaggcctcctccatcaacctggataaaaacagcatcaagttcctgtccgagagggccttc
gggacgctgccttccctcaagtccctgtccctcaaccacaacaacatctccttcatcacg
ccgggcgccttcaaggggctgcccagcctgacggagctgaagatggcccacaacgagtac
atccgctacctgcacacgcgcaccttcaccgcgctccggcgcctcgtcaggctggacctg
gccgactgcaacctcttcaacatcccagacaggatcttcatcgagctgcctgctctgcag
gagctgttctgcttccagaacaacttccgaaggatcccgggcgccatcaggggcatggag
aacttgacccatgtgtacctggagagaaacaggatcgaagcggtggcctataactccctg
cagggcctgaccaagctgaaatacctgaatctgcaggacaacaagataaatgtcatccac
gagcgagcttttcagggctgtcagaggatggagtacctgtacctgaatgacaacttgatc
gctgagcttccagaaaactcctttgatggcctgaggcacctgaagatgctcaacctgggg
gggaattttctcaggaacatttccaacacctggttccgggacttgggggagctggagttc
ctctacctggaccgcaacaggatcagctacatcgaggaaggggcttttgagaacctcacc
agcctggtggctctgcacttgaatagcaacaacctgacgacgctgcccttctccgtgttc
gagcccgtgtacttcctgggccggctgtacctcttccgcaacccctgggagtgcgactgc
cgcctggagtggctcaaggagtggatggagaactacaggctggtcagggacatcccgtgt
gcctccccctcctcggtggctggcgtcgatctgacggacgtgctcttcgagaggtctcct
gaaggtttctgcctggacccggaggagctgaacgtcacgtccgagcggccgacccccagc
gaggagccttggtccaccacagagagcaagttcaacagccttatctccaaactcctgctc
cagatgggccttcctgaagaggtggcaaacgccactgaagtgtacagtaacagcacgcag
ccggacggacagactgaaggggtttcttccggcgggggggaggacagaaccgaggctgac
tcctgttccttatacctcccagcacttttggcagtgattgttctgctgtgcaaataa
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