Agelaius tricolor (tricolored blackbird): 139591749
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Entry
139591749 CDS
T10815
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139591749 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139591749 (TGFBRAP1)
Membrane trafficking [BR:
atrc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139591749 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
VPS3_N
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
139591749
NCBI-ProteinID:
XP_071286860
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEKVSTAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMINLEPVPTGARIKGAVT
FTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYDYIVDFLTFCSDQEL
VWKYSEWILQKNEEVGVQIFTKRPLEEQEKNNINPDDIISCLNKYPKARVKYLEHLVLER
KIQKEKYHTHLAVLYLEAILQLKSVTTDNCTETTELLLKLRSLLQKSDLYRIRFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCMWNSESRDSQYRRRLFHLLLS
VYLTPGTSDCALVMAAVDLLNNHAAEFDAGLVLQVVPDSWSVQLLSPFLAGAVRQSIHTK
RMTQVALGLAQAENLIYKHEKVKQKGAPILLSDKKVCQVCQNPFCEPVFVRYPNGTMAHT
HCAANRHLNSNVTHHSPSSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttaaagctttcaagctcgtttctgctgttgagcgggagatgttaatgggagac
aaaaattacatcaacattgagtgcattgagtgttgtgggaagaacctctatattggaacc
aatgactgctttatctatcactttctgttggatgaaaaggtatccacagctggaaaaata
acttttgctgccaccaagcaactacacaaatacctgggtttgaagaagcctgtgagcgag
ttgaaagcagcctctgccctcacaagactgcttgtgctttgtgacaacacgataacacta
gtgaacatgatcaacttggaacctgtccccactggtgctaggatcaaaggagctgtgaca
ttcaccctgaatgaaaaccctgtgagtggggatcctttctgcgttgaagtttgcattatc
tcggtcaagcgccggaccattcaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactcctgaacaaccctgtgctgtggctgtagatggttactacttatgc
cttgcccttactacacagtatataattttgaattacaatactggcgtctcccaggaccta
tttccttattgcagtgatgagaaacggccaattgtgaaaagaataggcagacaagagttt
ctgttggctggccctggaggcctaggcatgtttgctactgtagatgggatttcacagcgc
gccccagtgcactggtcagagaatgtgattggggcagctttgtgctttccttacgtggtt
gccctcgatgatgaattcattacagtgcacagcatgctggaccagcagcaaaagcaaacc
ctgccctttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctact
aacaagggtgtgtatatcttggtgccactacctttggaaaagcagattcaggatctttta
gctagccacagagtagaagaagcccttgttctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgatgtccgg
gagctgatctctctgtaccccttcctgttgcctacttcctcttcatttatccggtctcat
ccccctctgcacgagtacgccgacctgaaccagctgacccaaggggaccaggagaagatg
acaaaatgcaaacgattcctcatgagttacttgaatgaagtccgcagcactgaggttgca
aatggctacaaggaggatattgacactgctttgctcaaactgtatgcagaggcaaatcat
gagagcctgctggatctcctagtttcagagaacttctgtcttttaacagatagtgctgcc
tggctggaaaaacacaaaaagtattttgcacttggtctcctgtatcactacaatggtcag
gatgctgcagcacttcagttatgggtgaaaatagttgatggagacattcaagattctaca
cggtcagatctctatgactacatagtagacttccttacattctgctcagaccaagagcta
gtgtggaagtactctgaatggattttacaaaaaaatgaagaggttggtgtacagattttc
actaaaaggcctttggaagaacaggagaaaaacaacattaatccagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtgtcaaatatctagaacatctagtactggaaaga
aaaatacagaaagagaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctaaaatctgtgaccacagataattgtacagaaacaaccgagctgctgttgaaactt
cgcagtctgcttcagaaatctgatctttatagaattcgctttattttagacaagatccag
ggcacagaccttcatatggagagtgcaattttatatgggaaactagaagaacacgagaag
gctttgcatatccttgtccatgagctgaaggacttccatgctgctgaggagtactgcatg
tggaactctgagagcagagactcgcagtacaggcggaggctgttccacctgctgctgtca
gtgtatttaaccccgggcacctcggactgcgcgctcgtcatggccgccgtggatctcctc
aataaccacgctgcggaattcgatgcgggtctggttttgcaggtggtgcctgacagctgg
tcagtgcagctcctctccccattcctggctggagcagtgagacaaagcattcacacaaaa
agaatgactcaggtggcacttgggttagcacaagctgaaaacttaatctacaagcacgag
aaggttaaacaaaaaggagccccgattcttctttcagacaaaaaggtttgtcaggtgtgc
caaaatcctttctgtgagcctgtgtttgtcagatatcccaatgggactatggcccacacg
cactgtgctgcaaacagacatctcaattccaatgtgactcatcactctcccagctccagc
aatcagacttga
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