Agelaius tricolor (tricolored blackbird): 139591796
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Entry
139591796 CDS
T10815
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04517
IgSF CAM signaling
atrc04519
Cadherin signaling
atrc04520
Adherens junction
atrc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139591796 (AFDN)
04519 Cadherin signaling
139591796 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139591796 (AFDN)
04530 Tight junction
139591796 (AFDN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
139591796
NCBI-ProteinID:
XP_071286983
LinkDB
All DBs
Position
Unknown
AA seq
1924 aa
AA seq
DB search
MSGGGGSREEERRKLADIINHWNANRLDLFEISDPTEDLEFHGVMRFYFQDKAAGNFATK
CIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNW
NKDDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEAL
RQASDKDDRLLHGDDIENFRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEF
RSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYCI
ARVMLPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKTRK
IADGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPK
LYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRI
SETTMLQSGMKVQFGSSHVFKFVDPTQDHIISKRSTDASLMVKGPRHKTGAVQETTFDLE
GDIHSGTALPASKSTSRLDGDRASSASSTAERGMVKPMIRIDQQDYRRQDSRSQDTHGPE
LILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPAE
RTHKVIAIVNKMVNMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRI
TVDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAMS
LLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIMRQQLGHIEAWAE
KQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPDE
PLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPSG
LQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITVT
LKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQ
ERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFEL
YNNSTQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYAS
GTTTKITSVSTGNLCTEEEILPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWPS
YEEKPQLQAESNHSINTTMQRVARSQEELRDKVFQPERNRLEVVIRKDVEYIDRKSDSDQ
WMNSSVDSSTSSQEHLNHSSKPVSPGSCLTKSGPGRWKTPATSQPTPVAISQPIRTDLPP
PPPPPPVHYAAEFDELQMDLPLPPPPPPNQIGAQASSQVAAAERKKREEHQRWYEKEKAR
LEEERERKRREQERKLGQMRSQPLIPAQPVVPPVSLQQVKSEKPSTLQRPQETVIRELQP
QQQPRTIERRDLQYITISKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQDL
QNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDEVDTMLIMQRLEAERRA
RQTAVPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKRR
QEEEYYSRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQRN
TSYLKTQVLSPDTIYTAKFVAYNDDDDEEEDSNLAGQDKYSSTRKSYGDFPPATLKPQQP
SRQPRPVSDGIFLSNSFQSSSVNANSTTVKKSQPPPPSNKPSFIHASSSKGINSYTGSTG
AAAGDVYRDPRDKRSKSQDADLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELENE
LNTK
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcggcagccgggaggaggagcggcgcaaactcgccgacatcatcaac
cactggaacgcgaaccggctggacctgttcgagatcagcgaccccaccgaggatcttgag
tttcatggagtaatgagattctactttcaagacaaagcagctggaaattttgcaacaaaa
tgtatccgtgtctctagtactgccacaactcaagatgtcatagaaactcttgcagagaag
tttcgaccagacatgcgaatgttgtcatcccctaagtactcactttatgaagtgcatgtc
agtggagaagaaagaagattagatgtggatgagaagcctcttgttgtacagttaaactgg
aacaaagatgatcgcgagggaaggtttgtcctcaagaatgaaaatgatacacttcctcca
aagaaagctcagagtaatgggcctgaaaaacaagaaaaagagggagtaattcagaatttc
aagcgaactctctcaaaaaaagaaaaaaaggaaaaaaagaggcgtgaaaaagaggcattg
cgacaagcgtcagataaagatgatagacttcttcatggggatgatattgagaattttcgc
cttgcagctgaggtttacaaagatatgcctgagaccagcttcactcgcacaatatccaat
cctgaggtggttatgaaacggcggcgacagcaaaaactagagaagagaatgcaggagttt
cgcagttctgatggcaggccagactcaggtgggacgctgagaatttatgcagacagttta
aaaccaaatataccgtacaagacaatcctgctgtccactacagatactgcagactttgca
gttattgaagcactggaaaaatatggcctggaaaaagaaaatcccaaggattattgtatt
gctcgtgtcatgctgcctcctggtgctcagcactctgacgataaaggtgctaaagaaact
attcttgatgatgatgagtgtccactgcagatattcagggagtggcctagtgataaagga
atactggtctttcagttgaaaaggcggcctcctgattatgtcccaaagaaaaccaggaag
atagctgatggaaagccattgaaggggaaggaaagagttgacgggtctggctatggctct
tgccttcctcctgagaaactaccatacctggtagaattaagcccagggagaaggaatcac
tttgcctactacaactatcacacttacgaagatggttctgactccagagataagccaaag
ctctatcgtctacaattaagtgtcactgaagttggaactgaaaaatttgacgacaattcc
attcagttatttggtccaggaattcagcctcatcactgtgacctcactaatatggatgga
gttgttactgtaaccccaagaagcattgatgctgaaacctatgtggaaggtcagcgtatt
tcagaaaccaccatgctgcaaagtggaatgaaggttcagtttgggtcttctcatgtattt
aagtttgtggatcctactcaggaccatattatttccaaaagatctactgatgcaagtctt
atggtcaaaggtccaagacacaaaactggagctgtccaggaaaccacatttgatctggag
ggagatattcacagtggaacagcattaccagcaagcaagagcaccagcaggctggacggt
gacagggcatcatccgcatccagcacggccgagcgaggaatggtgaagccgatgattagg
atagaccagcaggattaccgccgacaggacagcagatctcaggatacccatggaccagaa
ctgatactgcctgccagtattgaattcagggaaagctctgaagatgccttcttatctgcc
attataaattacacaaatagctcgacagttcattttaagctgtcaccaacatatgtcttg
tatatgacatgtcggtatgtattgtccagccaatacagacctgacatcactcctgctgag
cgtactcacaaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagtgata
caggaggtagaccaggttgatcagaaacagaagaatattgctggggcccttgccttttgg
atggcaaatgcatctgaactactcaatttcataaagcaagacagagatcttagccgaatt
actgtggatgcacaagatgttttggcacacttggttcaaatggcattcaagtacctggtt
cattgtctgcagtcagagcttaataactacatgccagcattcctggatgatccagaggaa
aataatcctcagaggcctaaaatagatgatgtgctgcataccttgactggagccatgtcc
ctgttgcgacgatgcagagtaaatgctgctctgaccatacagctcttctcccagctcttt
cattttatcaacatgtggctttttaacagattagttacagccccagattcagggttatgt
tcacattactggggagctatcatgcgccaacagcttggccacattgaagcctgggcagaa
aaacagggtttggaattggctgctgattgccacctgagcagaatagtacaggcaaccaca
ttgcttaccatggacaaatactcacatgcagatgttccaaatattaacagtacttgcttt
aagctgaattctctgcagttacaagccttgttgcagaattatcactgtgctccagatgaa
ccactcatcccaacagaattgatagagaatgtagtaactgttgcagaaaatacggctgat
gaacttgctcgcagcgatggccgagaagtccagctggaagaggatcctgacttacagctg
ccttttctcttaccagaagatggctattcctgtgatgttgtcagaaatgttccaagtggt
ttgcaagaatttttagatccactctgtcaaagaggtttttgtagactaacacctcatcca
cggtcaccaggcacgtggacaatatactttgagggtgcagattatgaaagtcacctgtcc
catgagaatgctgagctggctcagcctttgagaaaagaacctgaaattatcactgtaaca
ctaaaaaaacaaaatggaatgggactgagcattgttgctgccaagggtgctggtcaagac
aaacttggaatatatgtcaagtctgttgtgaaaggaggtgctgcagatgtggatggtcgt
ctggccgcgggggatcagttgcttagtgtggatggtcgaagtttggtgggcctgtcccag
gagagggcagcagaacttatgactaggacaggttctgtagtaacactagaggtagcaaaa
caaggagcaatttaccatggcctggcaaccctgcttaatcagccatccccaatgatgcaa
agagtttctgaccgccgtggctcaggtaaaccccgaccaaagagtgaaggttttgagctg
tataacaattccacgcaaaatggatcacctgagagtccccagctgccctggacggagtac
agtgaaccaaagaagctgccaggggatgacagattgatgaagaacagggctgatcatcgt
tccagtcccaatgtagcaaatcagcctccaagccctgggggaaagaatgcttatgcatct
ggaactaccaccaaaataacctcagtctctactggaaatctttgtacagaggaagagatt
ctgccaccacgacctgaagcttatcccatcccaacacagacctatactagagaatatttc
acatttccagcttcaaagtcgcaggatcgaatgggtccagctcagagtcagtggccaagt
tatgaagaaaaaccacagcttcaggcagaaagtaatcattctatcaatactaccatgcag
cgtgtagctcgttctcaggaagagctcagagacaaagttttccagccagagaggaatcgt
ttggaagttgtcatacgcaaggatgtggagtacattgatcggaagtcagacagcgatcag
tggatgaattcatctgtggattccagcacatctagccaggaacacctgaaccattcctcc
aaaccagtgtcgcctggttcttgtttaactaaaagtggacctggccgttggaaaactcca
gccactagccagccgactccagtggccatttcccagcccatcagaacagatcttccccct
ccaccgccacctcctccagtgcattatgctgctgaatttgatgaactacaaatggatttg
cctctgcctccacctcctcctccaaatcagataggagcacaagcctcctcccaggtagct
gctgctgagcgtaaaaaaagagaagagcatcagaggtggtatgaaaaggaaaaggcacgt
ttggaagaagaacgagaaaggaaacgtcgtgagcaggagagaaaactgggccaaatgcgt
tctcagccactaattcctgctcagcctgtagttcctcccgtctcccttcaacaagtgaaa
tcagaaaagccctcaactttacagaggcctcaagaaacagttattcgagagctgcagccc
cagcagcagccgcggactattgagcggagagacctgcagtacattaccatcagcaaggaa
gaactgtcctctggtgatagcctctctccagatccatggaaacgggatgcgaaggagaag
ctggaaaagcagcaacagatgcacatcgtggacatgctgagtaaagagattcaggacctt
cagaacaaacctgatcgtacagcagaagaaaacgaccgcctccgcaaactcatgcttgag
tggcagttccaaaagcgactgcaagaatcaaaacaaaaggatgaggatgatgatgaagaa
gaggatgatgaggtggatactatgctcatcatgcagcgactggaggcagaaagaagagca
aggcagactgctgtgccagcaatctctgttctagatttgttacaggatgaagaacgcaga
cggcagcaacaattggaagaaatgcggaaacgagaagcagaagaccgggccaggcaggaa
gaagagcgcagacagcaagaggaggagcggaccaggagagaggctgaagaaaagaggcgc
caggaagaggagtattacagtcgcttagaggctgaaaggcgcaggcagcacgatgaagct
gagcgaagattgctggaacctgacgagcctggtctgtacagacctccgcttccacgggaa
tatgaactcccatccccaaccccttcatctaacgctcctcctcccccacctcagcgaaac
acctcttacctcaaaacacaggtcctctcccctgacacgatttatactgccaagtttgtt
gcttacaatgatgatgatgatgaggaggaggattccaatctagcaggtcaggataagtac
tccagcacaagaaaatcctatggtgactttcctcctgccacccttaagccacagcagccc
tcccgccagcctcgcccagtttcagatggcatctttctttccaactcattccagtcatct
tctgtcaatgccaacagtactactgtcaaaaaaagccagcccccgcccccatcaaacaaa
ccaagtttcatccatgccagcagctctaaaggaataaattcatacactggatctacagga
gcagctgctggggacgtttatcgggatccaagagacaagagatctaaaagtcaagatgca
gatttacctggagcaccagaaaacctgacgttcagggaacgccagcgacttttttcacag
ggtcaggatgtatccaataaagtaaaagcttctaggaaactaatggaactggaaaatgag
ttgaacacaaaataa
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