Agelaius tricolor (tricolored blackbird): 139591803
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Entry
139591803 CDS
T10815
Symbol
NALCN
Name
(RefSeq) sodium leak channel NALCN isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139591803 (NALCN)
Ion channels [BR:
atrc04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
139591803 (NALCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
139591803
NCBI-ProteinID:
XP_071286995
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPKT
FEHYPPLQYVTFALDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAEIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTDDTQPGNVTWNNLAIPDTHCSRELEEGYQCP
PGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVAVDVIVAASNYYKGENFKRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHIYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTSCLLRRLPSASSSSCDHSKRSAIEENRYIDQKGNQSTFLPCNEEMN
KDLKVVSAAQLRKSVFSIRARNLLEKETAINKILRACTRQRMLSGSFEGQPAKERSILSV
QHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAE
MKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYH
QLYDLLGLVTYLDWVMIIVTICSCISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLK
IMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAKSGAQLLMVLRCLRPLRI
FKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPHIISRED
CHGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKG
WVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWE
DLKSRLKIAQPLHLPPRPDNDGFRAKMYDITQHPFFKRTIAVLVLAQSVLLSVKWDAADP
VTVPLATMSVVFTFIFVLEVTMKIIAMSPSGFWQSRRNRYDLLVTSLGVIWVILHFALLN
AYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVL
FGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDNSTYWKTD
CGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNM
VDDKREGVIPTFRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSM
LSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHS
LRESQQQELSRFLNPPSIETTQPSEDMNALNQDNSAQPETSSQQQLLSPTLSDRGGYRQD
TGDAGKPQRKFGQWRLPSAPKPISHSVSSVNLRFGGRSTMKSVACKMNPMSDAASCGSEV
KKWWTRQLTVESDESGEDLLDI
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaggaaacagagttcaagggtggaagcccagccagttacagattttggtcct
gatgaatctttgtcagacaatgcagatattctatggattaacaaaccatgggtgcactct
ttactacgaatttgtgccatcatcagtgttatttctgtgtgcatgaacactccaaaaacc
ttcgagcattatccgcctctccagtatgtgacatttgctcttgatactctgttgatgttt
ctttacactgcagagatgatagcaaaaatgcatatccgtgggatagttaagggtgatagc
tcctatgtaaaggatcgttggtgtgtgtttgatggattcatggtcttttgtctttgggtg
tcactggttttacaggtgtttgaaatagctgaaatagttgaccaaatgtcaccttggggc
atgttacggattccacgaccactcattatgattcgagcattccgaatatattttcgtttt
gagctgcccagaactaggataacaaatatcttgaagcgttctggagagcaaatatggagc
gtttcaattttccttctgttctttcttctcctgtatgggatcctgggtgtgcagatgttt
ggaacttttacataccattgtgtgactgacgacacacagccaggaaacgtaacctggaat
aatttagctatcccagacacccactgttccagagagctagaagaaggttaccaatgccca
cctggatttaaatgcatggaccttgaagatctgggacttagcaggcaagagctgggctac
agtggctttaatgagataggcacaagcatatttacggtttacgaagctgcttctcaggaa
ggctgggtgttccttatgtaccgagcaattgacagttttccccgatggcgttcctatttc
tatttcatcaccttaattttctttctggcctggcttgttaagaatgtttttattgcagtc
atcattgagacatttgcagaaattagagtgcagttccagcagatgtgggggtccaggagc
agtactacttcaactgccaccacccagatgtttcatgaagatgctgctggaggttggcag
cttgtggctgttgatgtgaataaaccccaaggcagagctcctgcatgtctacagaaaatg
atgaggtcatctgtgtttcatatgttcatactaagcatggttgctgtcgatgtgattgtt
gctgctagcaactactataaaggagaaaatttcaagagacaatatgatgaattttacctt
gctgaggttgcttttacagttctgtttgatttagaagctcttctgaagatctggtgtttg
ggcttcacaggatacatcagctcatctctccacaagtttgagttgctgcttgtaattgga
accactctccatatttatccagacctctatcactctcaatttacatattttcaggttctt
agagtagttcggcttataaagatttctcccgctttggaggattttgtgtataagatcttt
ggaccaggaaaaaaacttggaagtttggtagtatttactgccagccttttaattgtaatg
tcagcaatcagtttacagatgttttgctttgtggaagaactggatagatttacaaccttt
ccaagggcattcatgtcaatgtttcagattctcacacaggaaggatgggtagatgtcatg
gatcagacactgaatgctgtaggacatatgtgggcaccagtagttgctatttattttata
ctatatcatctttttgctaccctgattctactcagcttgtttgttgctgttattttggac
aacttggaacttgatgaagatctaaagaaacttaaacaactaaagcaaagtgaagctaat
gcagatacaaaggagaagcttcccttgcgtctacgcatctttgaaaaatttccaaacagg
ccacaaatggtgaaaatctcaaagcttccttcagatttcacagttccaaaaataagggaa
agttttatgaagcagtttattgatcgccagcagcaagataccagctgtttgctgcgaaga
cttccttcagcatcttcttcctcatgtgaccactctaaaagatcagccattgaagaaaac
agatatattgatcaaaagggtaatcagagtacatttctaccatgtaatgaagagatgaac
aaagaccttaaagttgtctcagccgcacagctccgtaagtctgttttcagcatcagagca
agaaaccttctggaaaaagagacagcaatcaataaaattctaagggcctgcaccagacaa
cgcatgctgagcggatcatttgaggggcagccagcaaaggaaaggtcaatacttagtgtc
cagcatcatatacgacaagaacgcaggtcactgagacatggttcgaacagccagcgaatc
agcagaggaaaatctcttgaaacattgactcaagatcactccaacacagtgagatacaga
aatgcacagagagaagacagtgagataaagatgatccaagaaaaaaaggaacaagctgaa
atgaaaaggaaagtccaggaggaggagctgcgagagaatcacccatattttgataaaccc
ctgttcatagttggccgtgagcacagattcaggaacttctgccgagtggtggtacgggct
cgctttaatgcttctaaaacagatcctgttactggagctgtgaaaaataccaaataccat
cagctttatgacttgctgggtttggttacttacctggactgggtcatgatcattgttaca
atatgctcctgcatttccatgatgttcgaatccccttttagaagagttatgcatgctcca
acactccagattgctgaatatgtttttgtaatattcatgagcattgagcttaatctgaag
attatggcagatggcttgttctttacaccaacagctgtcattagggactttggaggagtt
atggacatatttatatatcttgtgagtttgatattcttgtgctggatgcctcagaatgtc
cctgccaaatctggagctcagctcttaatggtgctccgctgcctccgacctcttcgaatt
tttaaactggtccctcagatgaggaaagtggtccgagagctgtttagtggcttcaaggaa
atttttttggtttctattcttttgctgactttaatgcttgtttttgcaagctttggagtg
cagctgtttgctggaaaactggcaaaatgcaatgaccctcacatcatctctagggaggat
tgtcatggcatcttcagaataaatgtaagtgtttccaaaaatctcaatttaaagttaaga
cctggagagaaaaagcctggattttgggtgccacgagtctgggcaaatcctcggaatttt
aattttgataacgtgggcaatgcaatgctggcactatttgaagttctgtcattaaaaggc
tgggtggaagtcagagatgttataattcatcgtgttgggccgatccatggaatctacatc
catgtttttgtattccttggctgcatgattggactgaccctttttgttggagttgtcatc
gctaattttaatgaaaacaaggggacagctttgctgactgtagatcagagacgatgggaa
gatctgaaaagcagactgaagatagcacaacctcttcatctcccacctcgtccggataat
gatggctttagagcaaagatgtatgatataactcagcatccattttttaagagaactatt
gctgtacttgtcctggcccagtctgtgttgttatcagttaagtgggatgctgcagatcca
gtaactgtgcctttagcaacaatgtctgttgttttcaccttcatttttgtccttgaggtc
acaatgaagattattgccatgtcaccttctggtttctggcaaagcagaagaaatcggtat
gatctcttggtgacatctcttggagttatatgggtcatacttcactttgctttactgaat
gcatacacatacatgatgggggcatgtgtaattgtcttcaggtttttctccatttgtggg
aagcatgtaacactgaaaatgcttctcctgactgtggttgtcagcatgtacaagagtttc
ttcatcatagtgggcatgttcttactgcttctttgttatgcttttgctggagtggtgtta
tttggtacagtgaaatacggagagaacattaacagacatgcaaatttttcatcagctggc
aaggctattactgtactcttcagaatagttactggagaagactggaacaaaattatgcat
gactgcatggttcagcctccattttgtacaccagataacagcacctactggaaaacagac
tgtggaaattacgctggtgctctcatgtatttctgttctttctatgtcatcattgcatac
atcatgctaaatttgcttgttgctatcattgtggagaatttctcattgttttactcaact
gaagaagatcagcttttaagttataatgacctaaggcattttcaaataatatggaacatg
gttgatgacaaaagagagggtgtaatccctaccttccgagtgaaattcctgctgaggctc
ctgcgaggcaggctggaggtggatctcgacaaggacaagctgctgttcaagcacatgtgc
tatgaaatggagcggctccacaacggtggcgatgtcacttttcatgacgtgctcagcatg
ctttcatataggtctgttgatatcagaaaaagtcttcaactggaagagctgcttgccagg
gagcaactggaatataccatagaagaggaggtggccaaacagaccatacgaatgtggctg
aaaaagtgcttaaagcgaatcagagcaaaacagcagcagtcatgcagcattatccacagc
ctgcgagagagccagcagcaggagctgagtcggtttctgaatcctcccagcattgagaca
acacagccaagtgaagatatgaatgctcttaatcaagataacagtgcacagccagagaca
agtagccaacagcagctccttagcccaacgctttctgacagaggtggctatagacaagac
actggagatgctgggaaacctcagcggaaatttggacaatggcgcttgccatcagccccc
aaaccaataagccattcagtgtcttcagtcaaccttcgttttggtggacgttcaactatg
aaatctgttgcatgcaaaatgaatcccatgtctgatgctgcttcctgtggatcagaagtc
aagaaatggtggacaagacaattaactgtggagagtgatgagagtggagaggaccttctt
gatatctga
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integrated database retrieval system
