Agelaius tricolor (tricolored blackbird): 139591835
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Entry
139591835 CDS
T10815
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139591835 (SOX21)
Transcription factors [BR:
atrc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139591835 (SOX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
139591835
NCBI-ProteinID:
XP_071287076
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHAG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcgacgaaagatggcccaggaaaaccccaagatgcacaactcggagatcagcaag
cgcttgggcgccgagtggaagctgctgactgaatcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcaccccgactacaagtaccgaccgcgg
cggaagcccaagacgctgctcaagaaggacaagttcgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcatgccggc
gcggccggcgggctggtgcccgagtcgctcctggccaaccccgagaaagcggcagccgcc
gccgccgctgccgccgctcgcgtcttcttcccccagtcggccgccgccgctgccgccgcc
gccgccgcggccgccgccagcagcccctattccctgctggacttgggctccaaaatggcc
gagatctcatcctcctcctcttcctcgggctccgggttgccctacgcctcctcgctgggc
taccccggcgccggcggggcgggcgccttccatggggccgccgctgctgccgccgccgcc
gccgccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcc
ctatga
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