Agelaius tricolor (tricolored blackbird): 139591838
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Entry
139591838 CDS
T10815
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
atrc00535
]
139591838 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
atrc00537
]
139591838 (GPC6)
Proteoglycans [BR:
atrc00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
139591838 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
atrc00537
]
Others
139591838 (GPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
PAF-AH_p_II
Motif
Other DBs
NCBI-GeneID:
139591838
NCBI-ProteinID:
XP_071287081
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MCVCARPSPPRLAKVCLGGRGAPGPPPPQPGGAAEARRSGGGGGAGLARRAGVALRAMPA
ARGAARRCALAGPLVPVPPPPLLLLLLLLLLLPVLPAAGTEGKARSCGEVRQAYSAKGFS
LASVPYQEIAGEHLRICPQEYTCCTSEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHK
KFDEFFRELLENAERSLNDMFVRTYGMLYMQNSEVFQDLFAELKRYYTGGNVNLEEMLND
FWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQ
GLTVGREVANRVSKVSPTPGCIRALMKMLYCPYCRGLPTVKPCNNYCLNVMKGCLANQAD
LDTEWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQ
PKPAPALRSSRSVPENFNTRFRPYIPEERPTTAAGTSLDRLRTIWRTMQHGVTDIKEKLK
LSKKFWSTLPYTICKDERVTAGPSVEEDCWNGHTKARYLPEIMNDGLTNQINNPEVDVDI
TRPDTFIRQQIMALRVMTNKLKNAYNGNDVNFQDTSDETSGSGSGSGCTDDICPTEFDFV
TTEAPPVDSDRREVEASATQPGCSLQTLLLIFLSLLLQGQWR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtgcgcgcccatctcccccccgcctcgcaaaagtttgcctgggcggccgg
ggggctcccgggccgccgcccccgcagccggggggcgcggcggaggcgcggcggagcggc
ggaggcggcggcgcgggacttgcgcgccgcgcgggagttgcgctccgcgccatgccggcg
gcgcggggggctgcgcggcgctgcgccctggcggggccgctagtgccggtgccgccgccg
ccgctcctgctgctgctgctgctgctgctgctgctgccggtgctgccggccgcggggacc
gagggcaaggcgcggagctgcggcgaggtgcggcaggcgtacagcgccaagggcttcagc
ctggccagcgtgccctaccaggagatcgcaggggaacatttgagaatctgccctcaggaa
tatacatgctgcacctcagaaatggaggacaagttaagccaacagagcaaactggagttt
gaaaacttggtggaggagacaagtcactttgtacgcacgactttcgtatcccggcacaag
aagtttgatgagtttttccgagaacttctggagaacgcggagcgctccttgaacgacatg
tttgtccggacgtacggcatgctgtacatgcagaactctgaggtgttccaggacctcttc
gccgagctgaagcgctattacacgggaggcaacgtcaacctggaggaaatgctgaacgac
ttctgggctcggctgctggagcggatgttccagcttataaacccccagtaccatttcagt
gaggactacctggagtgtgtgagcaagtacacagaccagctgaagccctttggagacgtg
cccaggaagctgaaggttcaagtgactcgagcgttcattgctgcccgcacctttgttcag
gggctgacagtaggcagagaggttgccaacagagtgtccaaggtcagtcccaccccaggg
tgcatccgggcgttaatgaagatgttgtactgcccttactgcagaggacttcccactgtg
aaaccttgcaacaactattgcctcaatgtaatgaagggctgcctagcaaatcaggctgat
ttggatactgagtggaatctgttcatagatgctatgcttctggtagcggagagattagag
ggaccattcaacattgaatcagtcatggatcctattgatgtcaagatttctgaagccatc
atgaacatgcaagagaacagcatgcaggtgtcagcaaaggttttccaaggatgtggccaa
cctaaaccagcacctgccctgagatcttcccgttctgtccctgaaaacttcaatacccgg
tttagaccatacatcccagaggagagacctacaactgctgctggcacaagtttggatagg
ctgaggactatctggaggacaatgcaacatggtgtaacagacattaaagaaaagctaaag
ctctctaaaaagttctggtcaacactgccctacacaatctgcaaggatgagcgggtgaca
gcgggtccgtccgtcgaggaggactgctggaatggccacaccaaggcgagatacttgcct
gagattatgaacgatggcttgaccaaccagatcaacaatccagaagtagatgtggacatc
acaaggccagacaccttcattcgacagcaaatcatggccttacgtgtcatgactaacaaa
ctgaagaacgcctacaatgggaatgatgtcaacttccaggacacgagtgacgaaaccagt
ggctcaggcagcgggagtggctgcacagatgacatctgccccaccgagtttgactttgtc
accactgaagcgccgcctgttgactcagacaggagggaggtggaggcttcagccacacag
cctggctgctcactgcagacattgctcctcatcttcctcagcctcctactgcagggacag
tggagataa
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