Agelaius tricolor (tricolored blackbird): 139591866
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Entry
139591866 CDS
T10815
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04517
IgSF CAM signaling
atrc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139591866 (LMO7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139591866 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139591866 (LMO7)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139591866 (LMO7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139591866
NCBI-ProteinID:
XP_071287150
LinkDB
All DBs
Position
Unknown
AA seq
1833 aa
AA seq
DB search
MTAAAAAPPPRRAPAAPRSLLLAMDGREDAEYDFQAAFAEARRWLEAVTRQCFGTEDFRA
ALENGVLLCDLINKIKPGIIKKINRLPTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQ
DLSNRVTVKPEETNRRVKNVLITLYWLGRKAQSDPDYNGPYLNLKAFEKLLGQALSKALE
ESSQPSRSGRDSGYGDIWYVDRGEPFPSSVTHKRDDSFDSLDSLGSRSCTSFSSDITLKG
GSEGCDSDTDSELPSKMHDSHKDDRSYRRISVIEPKPTTDFNRFLPNKNKQTAYVPAPLR
KKRTEKNEDNRRSWASPVFTESDGAFSSGRETNPVASCQNSRAECGLTNPASLQIIYEYD
SGSDSEDERRLPDVVLDDLANRRFLVKKSPVSSAAPGHHFMLHNDSPKSCSRESCPAGPL
AAMLEPLSNQRRQRQLDTKGENKPRVNNPSQLSGYCDEDEEEVGIPNIEKDDLYFRKLSS
SVPNTVVAFDKFLPKFWTPEEELLWKKVKKSSFKPWYKEIQGFSRKRSDSEDEDFAYKQS
YTIVANQPRPSFDWNSSCRRDQNYKPTAEYLGSSLSQIAEGKILESSDQPSQFSLLQALQ
KYTDYVSSEMETRIDPTSGPRLVKCRKNVSFIPGGKQGDEENGYLYPDLENDDLFVRKTG
AFHVNQVVLQDPRYLKKFSEQEPPLEGEIILQPREGQTVIPDLEKDDMIFRKVLSQKKEV
PLSGAPDKYHPALFPDPWSLPEEIRSKFLCLLEKNAIPEERKSNGRVLSPSLHHKKDDML
TRKIESWKVGSNVQPVNFIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQG
SKSLNDVSAEELQTLRKIRYEELQKIKEQLQEQDLKWQEDLAKWKSRRKSYTSELQKKKE
EREEIERRASEVSGRSTKSLKEMQQEREEREQDSYEEQKQEHNWAYSLNDDVFSEDKAPS
TAAKDWSAAKDHRLEEDASYSTKDSKSVYTTQPPKENLLESSAAREAPAPPESLEREQSP
ALLSTRYSVNAQTGSAQVSASLPRTYQKTDTSRLTSVVTPRPFGVHSRGISSLPRSFTMD
DAQKYNGEVEKAKRTQTLFTSISFSQPDSAHPVSTGAFRSRETATLTDPKDSKSMEQYSE
MRISINQRPGHSRSFGFTTNWSSSGAIVQTVEEGSPAALCQLHVDDEIIAVNGTKVSHMD
HSQWEEAINRALETGNLVMDVRRYGKNDWGKDLPSLPHVRHKILNLTSVATNIIGTSENK
WIDATSGEKVSNASTTSTKRDFSSSLQSSDTETKLINGMQGDLGSNEQRGSSGYSYNSWV
YLCGGPEPAMPDLPVPSISAPSRRVWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREE
WLRAKQEAEKESSKYFDEEQTVLTLNTTSVTSQAPPVSSWRASPEANAPEEPEQDGENEL
AASSLHEEEGRRRLQEERRVQEEATRHFEQEQELQELELERQRKEREQQQAEEQRRQAEL
EEQRRQAEKQREVSVEVPQYQRHYERYEVSKIKEDRAGHPLIDRHYERYEVSKTIEEQPG
QSFVDRNKSKSTTELNEFNTVRNGTQSKYSERSWNMGESQKKSQKEQNLSAAELERQQIL
QEMRKKTSLHTDSSWIRQRSASIHKEPISLYSSSMRRGESLDNLDSSGMRSWRHHSWLNQ
SASSSSLSSSQDFSRPVSTSNRAYMCTPSSSKTPPVATSARAPSTSQTAPRAQSPLSASQ
SGSQTRSSVLPVDATSVDPALELKSGSETTNSSATTAISDLKVQVQEELIYLQILIKRCS
IIFFLLMVCRILIYWSMMLRLCVVVFRSFFLLS
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggccgccgccgcgcccccgccccgccgagcgccggccgccccccgctcgctg
ctgctggccatggacgggagagaggacgcggagtacgacttccaggcggcgttcgccgaa
gcccggcggtggctggaggcagttaccaggcaatgctttggaactgaagactttcgagca
gctctagaaaatggagtcctgttgtgcgatttgattaacaagatcaaacctggcatcatt
aagaagatcaatcgtctgccaactccaatagctggcttggataatataaatgttttcctg
aaagcgtgcgaaaacattggactgaaagaagctcagctatttcacccaggagaccttcag
gatttgtccaatcgagttacagtcaaaccagaggagaccaacagaagagtgaaaaatgtt
ttgattacattatactggcttgggaggaaagctcaaagtgaccctgattataatggtcca
tacctcaatcttaaagcatttgagaagttattagggcaagcattgagtaaggcacttgaa
gagtccagccagccaagcagaagtggcagagatagtgggtacggcgatatttggtacgtt
gaccggggagagcctttcccgtcttcagttactcataaaagagacgattcctttgatagc
ttggactctcttggttcaagatcctgcacaagcttttcatcagatataaccttgaaaggt
ggcagtgaaggttgtgacagtgacacagactcggaactgccttccaaaatgcatgactcc
cataaagatgacaggtcttaccgcaggatttcggtgattgaaccaaaacctaccactgac
ttcaatcgtttcttacccaacaaaaacaagcagacagcatatgtgccagcacctttaagg
aagaagaggacagagaagaatgaggacaacaggaggagctgggcaagtcctgttttcact
gagtcagatggagcattttcaagtggacgtgaaacgaatcctgtagcttcctgccaaaat
agcagagcagagtgtgggctcacaaatccagcttccctccagatcatctatgagtatgac
agtggctctgattcagaagatgaaagaaggctgcccgacgttgttttggatgacttagca
aatcgtagatttctagtcaaaaagagccctgtaagctctgctgcacctggacatcatttc
atgttgcacaatgactctcctaaatcttgctcgcgagaaagttgtccagctggtccacta
gctgcaatgcttgaaccactgagtaaccagaggaggcagaggcaattggatactaaaggc
gaaaacaaaccaagagttaacaatccttcacaattatctgggtattgtgatgaggacgag
gaagaagtaggcatcccaaacattgaaaaagatgatctctattttcgcaagctaagttct
tcagtgccaaatacagttgttgcttttgacaaatttcttcctaagttttggactccagag
gaggaattgctatggaaaaaagtcaagaaatcttctttcaaaccctggtataaagagatt
caagggttcagtagaaagagatcagattctgaggatgaggactttgcttacaaacaaagc
tatactattgttgctaatcaaccaagaccaagttttgactggaacagtagctgcagaagg
gatcagaattataagccaactgctgaatatctgggaagctcattgtcacagattgcagaa
ggaaaaatcttggagtcttctgatcagcccagtcagttttcgttacttcaggccctgcaa
aaatacactgactacgtgtcttctgaaatggagaccagaattgatcccacttctggccct
aggctcgtaaaatgtagaaagaatgtttcctttataccaggaggcaagcaaggagatgag
gagaatggatatctatatccagatttggaaaatgatgatttgtttgttcggaaaactggg
gctttccatgtgaatcaagttgttcttcaagacccccggtatttaaagaaattctctgag
caggagcctcctctagagggtgagataattctgcaacccagagagggccaaactgtgatt
ccagatttggaaaaggatgacatgatttttcgtaaagtcctctctcaaaaaaaagaggtg
cctttatcaggtgctcctgacaagtatcacccagcactgtttcctgatccgtggagtctt
ccagaagagatccggtccaaatttctttgtttacttgaaaaaaatgcgataccagaggaa
aggaagagcaatggcagagtgctgtcaccatctttacaccataagaaggacgatatgctg
acccgcaagattgaatcttggaaagtgggaagcaacgtccagccagtaaattttatccca
ggtccatgcagtgaagaagactggaagaagtgggaagcaatcagggaggccagcaaagtt
agacacaagaaacggcagatggtggagagactgtttcaaaagctttctgatgagcaaggg
agtaaatctttgaatgatgtcagtgcagaggagctgcagacactgcgcaaaatccgttat
gaagagctgcagaagataaaagaacagttacaagagcaagatctaaagtggcaagaagat
ctagcaaaatggaagagtcgtagaaagagttacacttcagaattgcaaaagaaaaaggaa
gagagagaagaaattgaaaggagagcctctgaggtgtctggaaggagtaccaagtcactg
aaggaaatgcagcaggagagggaagagagagagcaggactcctatgaggagcagaaacaa
gaacacaactgggcatattcactgaacgatgatgtgttcagtgaagacaaagcaccttcc
acagcagcaaaagattggtcagcagccaaagatcaccgtttggaagaagatgcttcctac
agcactaaggacagtaaaagtgtgtacaccacccagcctcccaaggagaacctgctggag
agctcggctgctcgagaagctcctgctcctcctgagagcctggagcgggagcagagcccg
gcgcttttgtccactcgttactcagtgaatgctcaaactgggtcagctcaggtttcagct
tctctcccgagaacttaccagaaaactgatacctccaggttaacatctgtggttacgcca
agaccttttggtgtccactcaagaggaatctcgtcacttccacggtcgttcacgatggat
gatgctcagaaatacaacggagaagtagaaaaagctaaaagaactcaaactttgttcacc
agcatttccttttcacaaccagactctgcacaccctgtctccactggtgcattcagaagc
agagaaactgcgactctgacagaccctaaggattcaaaatccatggaacagtacagtgaa
atgagaatcagtataaaccagagacccggccacagtcgcagctttgggtttacaacaaat
tggagttcttcaggagccattgtacagacagttgaagaaggcagccctgcagcactttgt
cagctgcatgtagatgatgagatcattgctgtcaacggcacaaaggtttcccatatggac
cacagtcagtgggaagaagccatcaacagagcattagaaactggaaacctggtcatggat
gtcagacgatatggaaagaatgactggggcaaagacctgccttccctgccacatgtaagg
cataaaatcctcaatctcaccagtgtggctaccaacattataggtacatctgaaaataaa
tggattgatgcaacttcgggagaaaaagtttcaaatgcttccaccacatccacaaaaaga
gatttctccagcagccttcaaagttctgatacagaaacaaaattaataaatggaatgcaa
ggagatcttggctctaatgaacaaagagggtcatcaggttattcttacaattcatgggtc
tacctttgtggaggcccagagcctgcaatgcctgatctcccagtcccatccatcagcgct
cctagccgtcgggtttgggatcaagaggaagagcgaaaacgacaggaaaaatggcaaaaa
gagcaggaccgtttgttgcaggagaaataccaacgagaacaagagaaactgagggaagaa
tggctacgagctaagcaagaagcagaaaaagagagttccaagtattttgatgaggagcag
accgttctaaccctaaatacaacatccgtcacttctcaggctccacctgtgtccagctgg
agagcaagccctgaagcaaatgctcccgaggagccagaacaagatggagaaaatgagctg
gctgcgagctcgctgcatgaggaagaagggaggaggaggcttcaggaggaacggagggtc
caggaagaagcaaccaggcattttgagcaagaacaggaactccaagagctggagctcgag
agacagcgtaaagagagggagcagcagcaggctgaggagcagaggcggcaggcagagctg
gaagagcagaggcggcaggcggaaaagcagagggaggtgtcagtggaggtgcctcagtac
caaagacattatgagcgctatgaagtatctaaaataaaagaggatcgagctggccatcct
ctcattgacaggcattatgagcgttatgaagtttctaaaaccattgaggagcagcctggc
cagtcatttgttgacaggaataagtcaaagtcaactacagaactgaatgaattcaacaca
gtcagaaatggtacccagagcaagtattcagagaggtcctggaacatgggtgagtcgcag
aagaagtctcagaaggagcaaaatctgtctgcagcagagttggagagacagcaaatcctt
caggaaatgagaaagaaaacatctctacacacggacagcagctggattaggcagcgcagt
gccagtatacataaggagcccattagtctgtacagcagtagtatgaggagaggggagtct
ttggacaatcttgattcttcaggaatgaggtcatggaggcaccactcatggctgaaccag
tctgcatcctcttcatctctgtcttctagccaagattttagtcgcccggtgtccacttca
aaccgagcctacatgtgcactccttcctccagcaaaacacctcctgtggccacctctgca
agagccccctccacgtcccagacagctcccagggctcagtctcccctctctgcttcccag
tcagggtcccagacacgcagcagtgtgttgcctgtggatgcgacctcggtggatcccgct
ctggagctgaagtcaggatccgaaacaacaaactcttctgcaacgactgctatatcagat
ttaaaagtacaagttcaggaggaattgatttacttacagatcttaattaaaaggtgcagt
ataatttttttccttcttatggtttgcagaattctgatttactggagcatgatgttaagg
ctttgtgtagtggtatttaggtctttttttctgctgtcatag
DBGET
integrated database retrieval system
