Agelaius tricolor (tricolored blackbird): 139592104
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Entry
139592104 CDS
T10815
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139592104 (AFF1)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
139592104 (AFF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
DUF484
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
139592104
NCBI-ProteinID:
XP_071287624
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MAAQSSLCNEDRNLLRIREKERRSQEVLEDKKQFSEKTPLFAEPYKTNKGDELSSRIQNM
LGNYEEVKEFMSNKSCQNLIGIPKSVAPQFPPGPPEKAIRTLPSSFQHLTRRPPVGPMVV
PPRPPSHSSHYQKAQPGTEPALGLHSKSRSSASARSHGPEHSRGGRDAQAGFPHSHHGKP
GSGEGRAHGLQASPLALSPFLPCLLSSPVAPLSPLHSSQHINSRSQNSSKSHGSTYSQTK
SLQDLVTGSQEKESRDSPAVTLTSTTQPSSQTFPPSLTSKASAMQQKPTAYVRPMDGQDQ
APFESLELKPLLEEYHEGPNDDVSDLKAKVKAELSKLETLSEPKEETDEDLSDLKAKAKV
ELSKFETPSEPIEQTNPIDVQSIEEILREMTRSWPPPLTALNTPTKAEPSKFPFPTKELQ
PEGSVAKDQKQYGAPSETLPGSQPRTSMLQDDLQLSDSEESGDDQVVEKSPSSVAPPRYS
SLQSQPKSVASAHSSSSESGSTSDSESSSDSETESPSSDSDTSDPPGAPAPEPEPPTSNK
WQLDNWLTKVNPAAVPAESPSDTARGDGREEGKGQQQGSSSNSCQQHTELREPPHKSPVA
RAPQEAPLPTKGSCQKAPARAQEPSPRQTVGIKGPSKPLVHEGPRRGLKVESEPAPLELT
DQSFRDKPKVKKTAKTKSNDRKDPKPGLQEPSEKKKDKGSHQAKAKPFLEPRLMGDAQAC
DALSPLPQGTAPIRTGRHRPQDLHQEKLPLPLGEKLLSPVRDPPSREHLVVKIDLCHLEK
VPQPSRKNGHQRKAETKDLPDVRKQDLKRKATDTPEESLAKKRGEKEETDRKKMKSEKKP
KLLQSSANKDSSKLKASKASCESQKKDVLPPLPSMSAAQPAPKSAKMTQKRPRNETDELP
AIDNPAKNKSNHKDPSFAKRRKVEGNHTELSKGIKGSVGDVTKPFPVPSMPNGTSKPRRP
LIKFEKQQSKEYYIEQAQRLKHKADAMTDKTGKAFQYLEAALLFIEYGIALESDVLEPKS
AYSILSDTIVLIKFIMTLKPFADSSVSSHGKIFAVLRMRCQSILHMAMFGYKKDTAMRYS
RLLNDHFKSNFRVIQAPSPGVARSTGLPSPLSPIPSPAGSVSSQPGSNDSNGVGHSSVGN
STGSTVTVSCHISSVTSSYVNITSYILHAYEIWEKADALARKNKEFFAELSRATSALALT
SSLTDLVHYIRQGLQWLRLEANMP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccagtcgagcttgtgcaatgaggacagaaacttgctgcggattcgagagaaa
gagagacggagtcaggaggttctggaagacaaaaaacagttctctgagaaaactcccctc
tttgcagaaccctacaagactaataaaggagatgagttgtcaagccgaattcagaacatg
ctgggcaattatgaggaggtcaaggagttcatgagcaacaaatcttgtcaaaaccttata
gggattccaaagagcgttgcccctcagtttccccccgggccgcctgagaaggccatccgt
acattgccatcttcattccagcacctgacccgccgtccacccgtgggacccatggttgta
ccccctcgtcctccaagccactccagccactaccaaaaggcacagccagggacagagcca
gctttgggtttgcacagcaagagccgcagctcagccagcgctcgcagccacggcccggag
cacagccggggtggccgggacgcgcaggcgggttttccccacagccaccatggcaagcct
ggcagcggggaaggtcgagctcacggcctgcaggcctcccctctggcgctttcccccttc
ctgccatgtttgttgtcttctcccgtggcacccctgtcacctctacattccagccagcat
atcaattccaggtcacagaacagcagcaaaagtcatgggtcaacctacagtcaaaccaaa
tcattacaggacttggtgacgggatcacaggagaaggaaagtcgggacagcccagccgtt
accttgaccagcaccactcagccttcctctcagacttttcccccttctttgacatcaaaa
gccagtgcaatgcagcagaaaccaactgcctatgtcagacccatggatggccaagatcag
gcaccatttgaatccctggagctcaaacctctcctggaggaataccatgaaggacccaat
gacgatgtctcagatttgaaggcaaaagttaaagctgaactatccaagttggaaaccctc
tctgagcctaaggaagagactgatgaagatctgtcagatttgaaggcaaaagccaaagta
gaactatccaaattcgaaaccccttctgagcccatagagcaaaccaaccccattgatgtg
cagtccattgaagaaattttgagggaaatgacccgctcttggccacctcccctgacagct
cttaatacacctactaaagcagagccttccaaatttccattcccaacaaaggaattgcaa
cctgaaggatctgtagcaaaggatcagaagcagtatggagcaccttcagaaacgttgcca
ggttctcagccaagaacatcaatgctccaggacgacctgcagctcagtgatagtgaagag
agtggtgacgatcaagttgttgaaaagtcaccttcttcagttgctcctccaaggtacagt
tccttacagtcccagcccaagagtgtggcatcagcacattccagcagctcggagtcaggg
agcaccagtgactcagagagctcctcagactcggagacagagagcccctcgagtgacagt
gacacgagcgaccccccgggagcaccggcgcctgagcccgagccaccaacttctaataag
tggcagctggacaactggctgaccaaggtgaacccagcagcagtgccagcagagagcccc
agtgacactgcccgaggggatgggcgtgaggagggcaaggggcagcagcagggcagcagc
agcaattcctgccagcagcacactgagctgagggagcctcctcacaagagcccagtggcc
agagctcctcaggaggctcctcttccgaccaaaggcagctgccagaaggctcctgcacgc
gcccaggagccctcgcccaggcagaccgtggggatcaaagggcccagcaagcccctggtg
cacgaggggcccaggaggggcctgaaggtggagagtgagcctgctcctttggagctcaca
gaccagtctttcagggacaagccaaaagtcaaaaaaacagcgaagacaaaatccaatgac
agaaaagacccgaaaccaggacttcaagagccctctgagaaaaaaaaggacaagggctcc
caccaggccaaggccaaacctttcttggagcccaggctcatgggagatgcccaggcatgt
gatgctctcagtccccttcctcagggcacagcccccatcaggaccggcaggcacaggcct
caggatttgcaccaggagaaattgcccttgcctctcggggagaagttgctctcaccagtg
agggatcccccaagccgtgagcacctggtggtgaaaatagatctctgtcacctggaaaaa
gtccctcagccctccaggaaaaatgggcaccagaggaaagcagagaccaaggaccttcct
gatgtgaggaagcaggacttgaagaggaaagccacggacactcctgaggagtcccttgca
aagaagaggggagagaaggaggagactgataggaagaaaatgaaatctgaaaaaaaaccc
aaattattgcagtcttcagctaacaaagactccagtaaattgaaagcatcaaaagcttca
tgtgaaagccagaagaaagatgtgcttccaccactgccatccatgtctgctgcacaacct
gccccaaagtcagccaagatgacccaaaagagacccagaaatgagactgatgagctgcct
gccattgataaccctgccaagaacaagagcaaccacaaggatccctcgtttgccaagcgc
aggaaagtggagggaaatcatacagaactgtccaagggcatcaaaggatctgtaggtgat
gtcacaaagcctttcccagtgccttctatgccaaatggtacctctaagccaaggagacct
ctgatcaagtttgaaaagcaacagtcaaaggaatactacattgaacaggcccagaggctg
aagcacaaagctgatgcaatgactgacaagactggaaaggcctttcagtacttggaggct
gcccttttattcattgaatatgggattgccttggaatcggatgtgctggaaccaaaatca
gcttacagcatactcagtgacaccatagttctcatcaaattcatcatgactttgaaacca
tttgcagactcctcagtctcttcacacggaaaaatctttgctgtgttacgcatgcgctgc
cagtccattctgcacatggcaatgtttggttacaaaaaggacactgcgatgaggtattcc
agactcctgaatgaccacttcaagagtaatttcagagtaatacaagcaccttctccaggt
gttgcaagaagcacaggcttgccttctcctctttctccaataccctctcctgctggatct
gtgagttctcagccaggatcaaatgatagcaacggcgttggccacagcagcgttggcaac
agcactggctctactgtcactgtctcctgtcacatctccagtgtcacctcctcctatgtc
aacatcacctcctatatcctccatgcatatgaaatttgggaaaaggctgatgcactggcc
aggaagaataaagagttttttgctgaactcagcagagcgacgagtgctctggcactgacc
agcagcctgacagacctggtacactacatcagacagggattacagtggctgagactggaa
gcaaatatgccttaa
DBGET
integrated database retrieval system
