Agelaius tricolor (tricolored blackbird): 139592126
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Entry
139592126 CDS
T10815
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03020
RNA polymerase
atrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139592126 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
139592126 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139592126 (POLR2B)
03400 DNA repair and recombination proteins [BR:
atrc03400
]
139592126 (POLR2B)
Enzymes [BR:
atrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139592126 (POLR2B)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
139592126 (POLR2B)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
139592126 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
139592126
NCBI-ProteinID:
XP_071287708
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaagatatgcaatatgatgaagacgacgatgaaatcacgcccgac
ctgtggcaggaggcctgctggattgttatcagctcctattttgatgaaaagggtttagtc
aggcaacagttggattcctttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttgcaagctgaagcccagcatgcctcaggagaagtggaagag
ccaccccggtacctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccagactgagaaacctcacgtat
tctgcccccttgtatgtggatataactaaaacagttattaaagaaggggaggaccaattg
cagacccagcatcagaaaacctttataggaaagattcctatcatgctgcgttccacgtac
tgtttgctgaatggcttaactgaccgtgacctttgtgagctgaacgagtgcccactggat
cctggtggctacttcatcatcaatggctcagaaaaggttctgattgctcaggagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtaggtcttgtctggaaaattcctctcgaccaacaagtaccatatgggtcagcatgctg
gccagaggtggacagggtgcaaagaagagtgccatcggtcagcgcattgtggcaactctg
ccatatatcaaacaagaggtgcccatcatcattgtcttccgtgcactcggctttgtgtcc
gacagggacattctagagcacatcatctatgattttgaagacccagaaatgatggaaatg
gtcaaaccatctctggatgaagcatttgtcattcaggagcaaaacgttgccctaaacttc
attggctcaagaggtgccaagccaggtgtcaccaaagaaaagagaatcaagtatgccaaa
gaggtcttgcagaaagaaatgctcccacatgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagactgttgctggcagcactgggaagaaga
gagctggatgacagagatcattatggcaacaaaagactggatcttgctgggccactcttg
gctttcctgttcagaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacaa
aagttcattgacagagggaaagacttcaacttggagttggcaattaaaacaagaattatt
tcagacggtttgaaatactcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttgaaccgcctgactttcgcatccaccctttcc
cacctgagacgcctgaattctccaattgggagagatggaaaactggccaagccccggcag
ctgcacaacaccctgtggggaatggtttgccctgctgagacccctgagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attctggagttcttggaagagtggagtatggaaaacctagaagaaatatctccagcagca
atagctgatgctaccaagatatttgttaatggctgctgggtaggaatacacaaagatccg
gagcagctgatgaataccctaaggaagcttcgtcgtcagatggacatcattgtctcagag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctacactgatgcaggcaga
atttgtcggccccttttgattgtggagaaacagaagttgctgctgaagaaaaggcacatt
gaccaactgaaggaacgagagtataacaattacagttggcaggatctcgtggccagtggt
gtagtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgttcaacatacacacattgtgagattcaccca
tccatgatcctgggagtgtgtgcatctatcatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaagcaggctatgggagtctacatcaccaacttc
catgttcgtatggatacgctggcacacgtgctgtattatccccagaagcccctggtaaca
acacgctccatggagtacttgaggttcagagagctgccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcattatgaaccgttctgct
gttgacagaggctttttcaggtctgtgttctatcgctcatacaaagagcaggagtctaag
aaagggtatgaccaagaggaagtttttgagaagcctacacgtgaaacttgccaaggtatg
agacacgcaatctatgacaaacttgatgatgatggtttgattgcccctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtcacactgccagaaaatgaagatgagctg
gaaagcaccaacaggcgcttcaccaagagagactgcagcaccttcctgcggaccagtgag
actgggattgtagatcaggtcatggtgaccctgaaccaggaaggatacaaattctgcaag
atcagggtacgttctgtaagaattccacaaattggagataaattcgctagcagacatggt
cagaaaggaacctgtgggatccagtacaggcaagaggatatgcccttcacatgtgaaggc
atcacacctgatatcattatcaacccccacgccatcccttcccgaatgaccattggtcac
ttgattgagtgtcttcagggcaaggtgtctgcaaacaaaggagaaattggtgatgctaca
ccttttaacgatgctgtcaatgtgcaaaagatttccaaccttttatcagattatggctac
catctaagagggaatgaggtcctctacaatggcttcactggtcgaaaaatcacgtcccag
atcttcattggccctacctattaccagcgcttgaagcacatggtggatgacaaaatccat
tctcgtgcacgagggccaatccagatccttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcacggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccctaccaggtccacgtgtgcaac
ctctgtggaatcatggccatcgcaaacacgaggactcacacctacgagtgccgcgggtgc
cgcaataaaactcagatatctttggttcgaatgccctacgcctgcaaactcctcttccag
gaactgatgtccatgagtattgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
