Agelaius tricolor (tricolored blackbird): 139592136
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Entry
139592136 CDS
T10815
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139592136 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139592136 (HERC3)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139592136 (HERC3)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
HECT type E3
139592136 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
139592136
NCBI-ProteinID:
XP_071287726
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLE
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYISLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKILVQKDNREEFVEAYVNYIFNV
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTPSGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggctactcgtcttatggacagcctgggataggtagcaacctccaggtc
atcattcctgaaccacaggtgtatggcttcatccatgacagaaatgtcaaggaggtggca
tgtggaggaaaccactctgtgttcctgttggaagatggggaggtgtatacctgtggcctg
aacaccaaaggtcaactggggcatgactgtgaaggaagcaagccagagccgatcggggcg
ctggccgggcagcacatcgtgcacgtggcctgtggggagtcgcacagcgtggccctcagc
gaccagggccagctcttctcctggggcgccggcagcgatgggcagctggggctcaccacc
atagaggatgcagtgacagtgccaaggttgataaagaaattgaaccaacagacgatactg
caggtttcctgtggaaattggcattgcctggctctggcagcagatggccagttcttcacg
tgggggcagaacagctatggtcagctgggcttgggcaaagaatgtccctcccaagccagt
ccacagcgagtcaagtctctagatgggatccctttggctcaggttgctgcaggtggagcc
cacagttttgccctttctctctcaggagctgtgtttggctgggggaagaacagctcagga
cagctgggactaagtgatgaacgagaccgagagtccccgtgtcacgtgaagctgctgcgc
tctcagaaggttgtttacatcagctgtggagaggagcacactgcagtcctgacaaagagt
ggaggggtgttcaccttcggtgcaggttcctgcgggcagctgggccacgactccatgaat
gatgaggtgaacccccgaagagttctcgagctcatgggcagtgaagtgtcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacttgcaatgtgaagtgtccctctcct
gtcaagggtcactgggcagctcacaatgggcaactctcagggaaacctgatgcctgtaaa
taccacattgttaaacatatcttctctggaggagaccaaacttttgtgctttgctccaaa
tacgagaattccttgcctgctgatgatttccggaccataaatgaaactcgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaatcgatgaacattttaaaaccagtccaaagatcccagggattgacctg
aactccacgagagtgctgtttgagaagctgatgaactcccagcactctattctcctagag
cagatactgaagagctttgaaagctttttgattcctcagctgtccagctctccaccagat
gttgaggcaatgagaatctatctgattctcccagaattcccaccattccaagactccaag
tattacatctctctgacccttcctctagcaatggctattttgcgcctggacaccaacccc
agcaaagtgcttgataactggtggtctcaggtgtgcccacgatacttcctcaggcttgtg
gacctctacaaaggtgcagtggtttacctcctcagtggaaggaagacactgctgatccca
gtcctgttcagcagctacattacagctgctctcaggcttctggagaaactccacaaggtg
aatcagaaggttaaacacgtggaatatgataagttttatatccctgagatttccagcttg
gtggacattcaggaggattatctcatgtggtttttgcaccaggctggaatgaaagtaagg
ccgtccatcatgcaggacgctgtgactctctgctcttaccctttcatctttgatgctcaa
gctaagaccaagatgttacagacagatgcagaattacagatgcaggttgcaataaatggt
gcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
tttctggtacttcatgttcgcaggagtaacttagttggtgatgctttaagggagttgagc
atccattcagacattgacttgaaaaaacctctcaaagtcatctttgatggtgaggaagct
gttgatgctggaggagtgacaaaggaatttttcctcctgttgttgaaagaactgctcaac
cccatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgcaatctac
aatttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaacgtg
aagccctgcctagaggatttgaaggagctgtcccctacagaaggaaggagtctccagcaa
cttttagattaccctggggaagatgtggaggagacattctgtttgaattttacaatctgc
agggaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaattctg
gtgcagaaggacaacagggaagaatttgtcgaagcgtatgtcaattacatcttcaatgtc
tccatccacgagtggtacacagccttttctactggcttcctgaaagtgtgtggagggaag
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagtgctgtctataagggagactacactgccacacaccca
actgtgagaatgttctgggagaccttccatgaatttcccttggaaaaaaagaagaaattt
ctcttgttcctgacgggcagcgaccgcatccccatctacggcatgtccagcctgcgcatc
atcatccagtcgacgcccagcggggagcagtacctgcccgtggcccacacctgctacaac
ctgctggacctgcccaagtacagcagcaaggagatcctcagcgcccgcctcgtgcaggcc
atcgaccactacgagggcttcagcttggcctga
DBGET
integrated database retrieval system
