Agelaius tricolor (tricolored blackbird): 139592216
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Entry
139592216 CDS
T10815
Symbol
RRH
Name
(RefSeq) visual pigment-like receptor peropsin
KO
K04253
visual pigment-like receptor peropsin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
atrc04030
]
139592216 (RRH)
G protein-coupled receptors [BR:
atrc04030
]
Rhodopsin family
Vision
Opsin
139592216 (RRH)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
FtsK_4TM
7TM_GPCR_Srt
Motif
Other DBs
NCBI-GeneID:
139592216
NCBI-ProteinID:
XP_071287872
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MHWNDSSNSSESDNEAHSAFTQTEHNIVAAYLITAGVISIFSNIVVLGIFVKYKELRTAT
NAIIINLAFTDIGVSGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASIGLLTVVA
VDRYLTICRPDIGRRMTTRSYATLILAAWINAVFWSSMPTAGWASYAPDPTGATCTVNWR
KNDASFISYTMSVIAVNFVVPLTVMFYCYYNVSRTMKQYASSNCLESINIDWSDQVDVTK
MSVVMIIMFLVAWSPYSIVCLWSSFGDPKKISPAMAIIAPLFAKSSTFYNPCIYVIANKK
FRRAILAMVRCQTRQEITINNALPMSVSQSALTSQNSSHLPA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcattggaatgactcatccaattcctcagaaagtgacaatgaagctcattcagccttc
acacagactgagcacaacatagttgcagcttacttaataacagcaggagtgataagcatt
ttcagtaacattgttgtgttaggcatctttgttaagtacaaagagcttcggacagcaacc
aacgcaattattatcaacttggcttttactgatattggtgttagtggcattggttacccc
atgtctgctgcctcagacctgcatggaagctggaaatttggatatactggatgccagatc
tatgctgccttaaatatcttttttgggatggcgagtattggtttgctgactgtcgttgct
gttgatcgttacctgaccatttgcaggcctgatataggaagaagaatgactacccgtagc
tatgccactctcatccttgctgcttggataaatgcagtcttctggtcttccatgcctact
gcaggctgggccagctacgctcccgatcccaccggagcaacatgcacagtaaattggagg
aaaaatgatgcgtcctttatttcctacacaatgagtgtaattgctgttaattttgttgtg
cccttaacagtcatgttttactgttattacaatgtttcccggacaatgaaacaatatgcc
agcagtaactgcctggagagcattaacatagattggtctgaccaagtagatgtgacaaag
atgtctgttgtgatgattatcatgttcttggtggcatggtctccatattctattgtgtgt
ttgtggtcttcctttggagacccaaagaaaatttctcctgcaatggccatcatagctcct
ctctttgcaaaatcttccacattctataatccctgcatttatgtcattgcaaacaaaaag
tttcggagggcgatcctggcaatggtgcgatgtcagacaaggcaagagataaccataaac
aatgctttgcccatgagtgtgtctcaaagtgcactgacgtcgcagaactccagtcatttg
cctgcataa
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