Agelaius tricolor (tricolored blackbird): 139592336
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Entry
139592336 CDS
T10815
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Enzymes [BR:
atrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
139592336 (TARBP1)
Transfer RNA biogenesis [BR:
atrc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
139592336 (TARBP1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139592336 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139592336
NCBI-ProteinID:
XP_071288135
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MEVVLADTLLSRCGDRAALLRALSAPLSAERAEALRLLLQRLAASGPAAAGEAEALRRAA
WEVALERCRPLLRGGEGAAGGSAERLRAARAARGALRYCVQLCGAPLAARLARDALGELA
AGGGAAAQEAAVEALVAAAPRLEEPELLSRCAAAALALVREEGEGEAAAALVAGRLLPAL
GANGAALPRVWEGLLGSGGAARAGRALLALSALADSLLPRGPAAPGLDARLCPRFWRLVQ
EGLTERDGLCRKRARYLLKRALDLSGGQRAELRCAPDGGHEPSLFWWSAEKNEQLLQFWE
TYILIMETLEGNQIHVIKPVLPKLNSLYELAISGDKGCWLFHPSWHVCIYRRMFESENKT
LTKEGILHFLELYETKHLPNSFVFSEFVIGPLMDALSESSLYSSRTNVSSAGSCIQLSIS
LLSLQYLSMDIHGWDFRRMPGQSIGACPPLGMKLQKFLATYLTLLPEEEKGSFLLKFIQR
MTSRHWCAVPILFLSMALASIPACKVLGAEGLHALRDVLQCTMITHQILLRGAAQCYLLQ
TTMHLTDVEKVSFSEVSSFLLSLRPEESLRRDTLLWTELCSWLEVNDRCFRKSVTSDFGC
QETSSLCQYVRSLVGEYLKTPASERENCFMPDWFEAKLVSTMILLAADVEQMKNKCSGKS
NIEWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQLLLKLLQTRWLKCSNAQDDEVLF
FIWKSLVTPVESILEFVLRRLITNELSTVGDLDRCDLYLALIPEIMNLCLKVNLKKMSSI
KNFLSSLISASIRNLQERSSEKELKLKDQIRKVASMASLAAVCEIMDGELQVHLESLPSV
DALKKLISFSQFNEVLKKPSYIEEKNSLCEEKTSQGWGKIVARYVHDQWICLRFVLNSFA
TLAQGCEETSVMSLSMAERSKEIIQSALEALSILPSDQVSPVFDCMKVLVPKLLDSSEAL
CIEAFDLAWKIISSLSNTQLIFWANLKAFVQFIFDTEVLAVAASAKGQAYTKIKEIIFKL
IDLSTTKTGVFNVILSHCCQSWIFPTVDERSALTNAFLNAGNYSELITEACVFGTVFRKD
QRHIQDVHAFIENLGEKCAANVVTESTNRDDHFVRICAVKFLCLLDGTNILHKRFMEDIF
IKLLDKDELVSRSRTRYYANSLQHRIKNRVWQTLLVLLPKLNQNFLSGTLDRVFQAGFSN
NQASVKYFIEWIVILTLHKYPQFLDKFWDCFCYDEDKLKKSICTFLSVLAHFDIILQNTP
EKKPALKKALIVVLQWCFSHNFSVRLYALIALKKIWAMCRMLHVEEFEALTPVIESSLQQ
VENMHGTGNARRNWQRIQDHFFFATFHPVEDYSLETIFYILPRLSELAEDEWISLSRFGR
FTDIPLPAAFQWCHSRTELRELKPSDWAQQDMGSHLAEADSQTEWTDVQKKIIPWKNSTP
SLDLEMAFQDRAAKLGKSNSRLIVVASLIDKPTNLGGLCRTSEIFGASALVVGSLHYVQD
KQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYTIIGVEQTAKSFDLTEYCFPEKSL
LLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQVIKQKQQQ
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggcggacacgctgctgtcccgctgcggggaccgcgccgcgctgctg
cgggcgctcagcgcgccgctctcggccgagcgggcggaggcgctgcgcctgctgctgcag
cgcctggcggcgagcgggccggcggcggcgggcgaggcggaggcgctgcggcgggcggcc
tgggaggtggcgctggagcggtgccggccgctgctgcggggcggggagggcgctgctggg
gggagcgcggagcggctgcgggcggcgcgggcggcgcggggcgcgctgcggtactgcgtg
cagctctgcggggcgccgctggcggcgcgcctggcccgcgacgcgctgggcgagctggcg
gcgggcggcggggcggccgcgcaggaggcggcggtggaggcgctggtggcggcggcgccg
cggctggaggagccggagctgctgtcgcggtgcgcggcggcggcgctggcgctggtgcgg
gaggagggcgagggcgaggcggcggcggcgctggtggccgggcggctgctgccggcgctg
ggcgcgaacggggcggcgctgccgcgcgtctgggaggggctcctgggctcgggcggcgcg
gcgcgggccgggcgggctctgctggcgctgagcgccctggcggactcgctgctgccgcgg
ggcccggccgcgccggggctggacgcgcggctgtgcccgcggttctggcggctggtgcag
gagggcctgacggagcgggacgggctgtgccgcaagcgggcccgctacctgctgaagcga
gcgctggacctgagcggcgggcagcgcgccgagctgcgctgcgccccggacggcggacac
gaaccgagtctgttctggtggtctgctgagaagaacgagcaactcctacagttttgggaa
acttacattttgataatggaaactttggaaggaaaccagatccacgtcataaagccagta
ttaccaaaactaaacagtttatatgagcttgccatatcaggggataaaggttgttggctg
tttcacccatcgtggcatgtgtgcatttacagacgaatgtttgagagtgagaataaaaca
ctgacaaaggaaggaattcttcattttctggagctttatgaaacaaagcatcttccaaat
tcatttgttttttcagagtttgttattggaccactaatggatgccctctcagaaagttcc
ctgtacagcagcaggacaaatgtgagctctgcaggctcctgcatccagttaagcatttct
cttctcagtctgcagtatctttccatggacatacatggatgggatttcagaaggatgcca
ggtcaatcaataggagcctgtcctcctttgggaatgaagttacagaagtttttggctact
tatctcactcttcttccagaagaagaaaaaggcagcttcctgttaaaatttattcagagg
atgacaagtaggcattggtgtgctgttcctattttgtttctttctatggctttggcatct
attcctgcgtgtaaagtacttggtgctgaaggacttcatgctttaagagatgtcctccag
tgtactatgattacacatcagattttattgcgtggagctgctcagtgctatcttcttcaa
acaactatgcatttgacagatgtggagaaagtgtccttctcagaagtttcaagctttctt
ctgtcccttagaccagaggagtccctaaggagagatactttgttatggacagagctttgc
agttggttggaagtgaatgacaggtgcttcaggaagtctgtaacctctgattttggatgt
caggagacatcatcattatgtcagtatgtgcgcagtcttgtgggagagtaccttaagaca
cctgcatctgaaagagaaaattgctttatgcctgactggtttgaagctaagcttgtctca
acaatgattctgttggctgctgatgtggagcagatgaagaataaatgcagtggaaaaagc
aacatagagtggattgaactagaggctttcttgaaccctcttctggatgtcttgatgaaa
cttggcagtaatgcttacataccaacactgaaaacagataaaagccttcagcttctcttg
aagttattgcagacccgttggttaaaatgttccaatgcacaagatgatgaagtactgttc
tttatctggaaatctcttgtgacacctgtggagagtattcttgaatttgttctccggcgg
cttattaccaatgagttaagcactgttggcgacctggatcgttgtgatctgtacttggct
ttaattccagagataatgaatttgtgcttgaaagtcaacttgaagaaaatgtcatctatc
aagaatttcctttcatccctgataagtgcatctattcgtaatcttcaggagagaagttct
gagaaggagctgaagcttaaggatcaaattagaaaagtagctagcatggcttcactggca
gctgtatgtgagataatggatggggagctgcaagtgcacctggaatctctgccttctgtg
gatgccctgaagaaattaatttccttttctcaattcaatgaagtattaaagaagccatct
tatattgaagaaaaaaatagcttatgtgaagaaaagacatctcaaggatgggggaaaatt
gttgcgcgctatgttcatgaccagtggatttgcctccgttttgttttaaattcatttgca
actctggctcaagggtgtgaagaaacttcagtaatgtcactgtccatggctgaaaggtca
aaagaaattatacagtctgcattggaagccctgtctattcttccttcagaccaagtttca
cctgtgtttgactgcatgaaagtccttgttcccaagcttctggactcatcagaggctctc
tgcatagaagcatttgatttggcttggaaaattatatcctctttgagcaacacacagcta
atattttgggccaatctaaaagcttttgttcagttcatctttgatactgaggttctagct
gttgctgcaagtgcaaaaggtcaagcatataccaaaataaaagagataattttcaagctc
atagatctgtccactacaaagactggagtcttcaatgtaatccttagtcattgttgtcag
tcttggatatttcccactgttgatgagagaagtgccttgacaaatgctttcttaaatgct
ggaaattatagtgaacttatcactgaggcttgtgtctttggaactgtatttaggaaagat
caaagacacattcaggatgtgcatgccttcatagaaaaccttggagaaaaatgtgcagca
aatgttgttacagaaagtacaaatcgagatgatcactttgttcgcatttgtgctgttaaa
tttctgtgcttgttggatggaacaaatatcttgcataagaggtttatggaagacattttc
atcaaactacttgataaggatgagctggtgtctaggtctagaacacgctattatgcaaac
tctttgcagcatagaattaaaaaccgggtatggcagacactcctcgttcttctcccaaag
cttaaccagaattttttgagtggaactcttgacagagtttttcaggctggattcagtaat
aatcaggcatctgtgaaatacttcatagaatggattgttatcttgactctacataaatat
ccccaattccttgataaattctgggattgcttttgctatgatgaagacaagcttaaaaaa
agcatctgcacatttttatcagtgttggcccactttgacatcattcttcaaaatacccca
gagaagaagccagctttgaagaaagccctcatagttgttctgcagtggtgtttcagccat
aatttcagcgttcgactttatgcattaattgcccttaaaaaaatctgggctatgtgcaga
atgctgcatgtggaagaatttgaagctctgacaccagttattgaatctagccttcaacaa
gtggaaaacatgcacggcacagggaatgccagaaggaactggcagcgaatccaagatcac
ttcttctttgcaacatttcatccagttgaggattatagtctagagacaatattttacatt
cttccccgcctttcggaactggctgaggatgaatggatctccctctctagatttggcaga
ttcactgacattcctttgccagcagcgtttcagtggtgccactcccgaacagagcttcgt
gagctgaaaccaagtgactgggctcagcaagacatgggttcacatttggctgaagcagac
agccagacagagtggactgatgttcagaagaagattataccctggaagaacagtactcct
agtttagacttggaaatggcatttcaggatcgtgctgctaaacttggcaaatcaaacagc
agattgattgtggtggcttcacttattgataaacctaccaatttaggaggtttatgtcgt
acaagtgaaatatttggggcatctgcactagttgttggcagtcttcattatgtacaggat
aagcagtttcagcatctgagtgtttctgcagagcagtggctcccccttgtcgaggtgaaa
ccatctcagcttgttgattatttacagcagaaaaaaacagaaggctacactattattggt
gtggagcaaacagctaaaagttttgatcttacagaatattgcttcccagagaaatcacta
ttattgctgggaaacgaacatgagggaatcccagccaacctgattcaccacctggatgtc
tgtgtggaaattcctcagcagggcattatccggtccctcaatgtccatgtgagcggggct
ctgctgatctgggagtacacaagacaacaagtgatcaagcaaaaacagcagcaatga
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integrated database retrieval system
