Agelaius tricolor (tricolored blackbird): 139592649
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Entry
139592649 CDS
T10815
Symbol
DCHS2
Name
(RefSeq) protocadherin-23
KO
K16507
protocadherin-16/23
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139592649 (DCHS2)
Cell adhesion molecules [BR:
atrc04515
]
Cadherins
Cadherin related
139592649 (DCHS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
139592649
NCBI-ProteinID:
XP_071288820
LinkDB
All DBs
Position
Unknown
AA seq
3283 aa
AA seq
DB search
MARRLRAGRCRAGQDGAPPTGRALALLLPLWLCAAGGGAAPVYNLSLAVDEGLPAETLVG
DIRAGLPPGSDPLGGFLLSEGSGESAVLADFHVQPETGIIRTARRLDRERRARYSFAAAT
LRGEVVQVEIAVTDVNDHPPRFPKDSLQLNISELSPPGTAFRLPAARDPDAGGFGTQGYA
LLEEGGAAGDPPLFQLRYVRPEPLELVLLRRLDRERADVHRLVVEAWDGGSPRRRGRLRV
SVRVLDENDNAPAFSRGEYRARLREDAPPGTAVCRLRATDPDLGANGEVRYAINRRQSDP
DGYFAVEERSGVLLLRRPLDREARALHRLVVEARDGGAQPEVSSVLVSVAVLDVNDNRPS
IRLLYLTETGGPRVSEGARPGDYVARVSVSDADEEGAEGDGGGIALALLGGDGAFALRTA
GAGVFFLCVAGPLDRESRDLYELRLVATDGGTPPLSAEEPLLLRVADLNDETPAFPQPHY
RAAVSEAASPGTAVLRLSASDADEPGSPNAEVRYALEGDAAALALLRIDARSGAVSTRAR
LDRERQAALELRVVARDGGVPPRAAACRLSVRVEDANDNEPRFERAVYRARMPEHAARGR
RLLQVKATDADADQFGEIEYSLYDGFNFYEKSKAFQIDPHTGQIFVSQDIDREGDPTTYD
LLVKATDGGGLSAQAFVRIEIEDINDNQPVFEQDTYVTSISSHTHPGTEIINVAATDRDS
GIFGIVTYELVPGDFSSFFTVDSSTGIIYLTSALGHIGHSAFFLTVSARDGGGLPSASNA
AVTVNVLQTVLVPAIFERSRYSFSVPEDAPEDSVIGTVKAREPPNSLEVVSYRICSGDPH
GKFSIDPQFGIIRTKKQLDHEAQSVVVLTVQSQLGDSPVYSSTQVNISVTDINDNPPEFL
TKSDKVTISHTQPPGTAVYIAHAEDKDSGLNGAIKYSIASKQSDAFSIDPSLGVVNLTRT
VVAEKQQEYTLHIAAEDCGSPPLTSLLMLTVVIEEQKMGPTLVFQSLVYQIEVSEATSPG
AQILQVQAHSLDPHSVTSNLRYSLEPSTDSIAFGISSDTGWIYLRKHLNYECAQMLCFRA
LVSTSEDKNLRQNASTSIIVNVLDENDNSPMFLRESYFFEIEENPIPSGVVGTITAVDKD
SGRNGQLSYFLLSDGKYFKMNSNTGEIINWAALDREEQAHHELQVLVTDAGQPRRNATAT
VRIAVHDRNDHPPCFPQGALRRQVLEGQPSGTLVATIFAKDFDSGNNGVVLYSIESEEDI
GYFQIDAVSGELRTTRPLSHAERSDYRMMVMAKDQGMPSLQGRAAVYIQVIPLPNGRSGF
FQNFKHFVVPENFKPAQVLDSLKALSNHLALNRKLHFSIAKDDNVHFEVDSLTGDLYLSK
ELDYETDSHFLLQVIIKDYNNPPQNSTVFLSIDVEDKNDHSPHFQDDFVVIGIEENVPVG
TLVYTFNAKDGDGGFLNSKIEYSLEISNTGENPFLIHPLYGTLTTASPLDREITRSVILT
VFAEDQAINLTDRRLDSLAVKIVILDINDNSPSFTSSRLSYVMEDVEVGFFVHHIVAKDP
DEGRNGQVTYHILAGNENKAFVLDKITGLLTTAQFLDREVQERYSLTVMALDDGSPALSA
TQVLTIIVLDVNDEAPGFLKQLYETAVPENRDPGEFVIRVEAVDQDAGLNSLLQYEILPG
AGYEKFKMNSDSGELVTAASLDRETQEVFSIKVLVRDSGTPSLSSTVTVICTVLDENDHS
PTFLLPPSEIFIPENQQLSVVYIIQAVDMDAGNNGALRYKITGGNVGEYFTLNNTSGKLL
VTRSLDREDISNFTLVIECHDLGSPLRSSTAQLYLTVLDENDHSPLFAKTQYQISVTEDL
EEGSAILDLSASDEDAGLNGEVMYSLIDDTYGAFAINSVTGSIVTTKALDRETKSQYTFR
AVASDCSTHFPRSTTVSVVVHVNDVNDNDPGFLQNPIRVFVPAETAVNETVATVRAEDVD
LGSNGAVVFNLMMAETVFQVDVKTGDIILREPLASKDFSTQLLVTASDQGITPRTATAVV
IIFTEEQEEVISFSHSLYEASVPENSAAGTSLLRVEAYEHKFTGEDIKYSIFNDQEIFSI
HPVTGTITVKEPKYLDYEDKRKIHLTVVAENSFNSVFCGVTVLIQDVNDNIPKFEQSYYR
TSIWEGQSPKTDIIQVFATDLDSGLNGETEYSIVSGNENATFLIDSARGILATNTGLDYE
NASSYRLVVQAADKGNPRLSATTIVRIQVLDVNDNAPVVQPLGEEEVPENALPGFIVTQV
SASDADSRPALQFGFIYDKSPEMKFAIDQHTGVIIVVEPLDFEETAVYTLHIIVSDSVHQ
TEAELTILVLDINDNPPVFTQDFYQVNLPELISMDATVLTLSAIDRDSEHNGMVSYKILS
SREGFSIDHKNGSLFFTEPVMQLKNISIIHLLIEATDGGSLPLSAVTSIEVHIEDVNNCA
PRFTKALYNLSVSEDASVGENILLFSAIDCDWMRDNTFVEYSIIGGNAENLFSVETSVMG
SETSYKLVGSLVLSSALDRETAASHQLVLLASDRGTPSLNSTATVLITVLDVNDNPPVFS
NSEYHVHVKESIPIGSHITEVSAKDCDAGTNAEITYAIISGNDRGHFCLDGRTGSVNLTN
ALDYEDTMKFTLVIQATDGGTDVKNMAFAVILVSVLDDNDYAPLFLFPSLSCTVSENLPT
FSFVCAVCALDFDKGSYGYLTYSIQSSCLTHREAARDHDMFFIDPLTGDIHTKQMFDYES
QNRYCLIIQAKDKGDSLATTTVQVDIEGRDEFDPVFTQEHYFFNLPEKNEAGQLIGRVTA
SDSDGGLDGVVHYSLLKPSPFFSVNQTSGNIYLTQTVHRRKNGIKRNDDTLKLLVRAHSP
KIVSRFTACTVFVNVSNSPESDPTVSAHSLTVSVSISLMVFLLLAISLITLTLRLKQKDL
MNACVKRNPVSSSAADVNSIREDEDCQKIQSTESSMLPMGAIAKWLSLAGLGEGKDDDVS
CRHSDSSGHGSAEGETAEDEEIKRIYECPCRKSIGSALSEHGSQLPDSGIPRQSDQFSYH
SDVIATMQSMENVQTIKGESREEACDTAYAHKILSQTLTEIGIKEEGMMTDHTRDYVLMP
DGKDYGYDLLATVGISDEDLRGGYNWDYGLSCEPRFQPLASVFNDIAELKDENVHIHSFS
QEKKSLDFPPPLITSVAQPGIRTVPPRMPNITSGQAFNKCPYSPIIHYHGYPPPTMTPRF
SPTLSLLTMQTPSASPVVSDGKMIGTCLIDPSYDLATEEKIQV
NT seq
9852 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcggctgcgggccggcaggtgccgggccgggcaggacggcgctcccccgacg
ggacgggcgctggcgctgctgctgccgctgtggctgtgcgcggcgggcggcggcgcggcg
ccggtgtacaacctcagcctggcagtggacgaggggctgccggccgagacgctggtgggc
gacatccgcgcgggactgccaccgggctcggacccgctcgggggctttctgctgtcggag
gggagcggcgagtcggcggtgctggcggacttccacgtccagccggagacgggcatcatc
cgcacggcgcggcggctggaccgggagcggcgggcgcgctacagcttcgcggcggccacg
ctgcgcggcgaggtggtgcaggtggagatcgctgtcaccgacgtgaacgaccacccgccg
cgcttcccgaaggacagtctgcagctcaacatctccgagctcagcccgcccggcaccgct
ttccgcctgccggctgcccgcgaccccgacgcgggcggcttcggcacgcagggctacgcg
ctgctggaggagggcggcgcggcgggggacccgccgctcttccagctgcgctatgtgcgg
ccggagccgctggagctggtgctgctgcggcggctggaccgcgaacgggctgacgtccac
cggctggtggtggaggcgtgggacggcggcagcccgcggcgacgcggccgcctgcgggtg
tcggtgcgggtgctggacgagaatgacaacgcgcccgccttcagccgcggcgaataccgg
gcgcggctgcgggaggacgcgccgccgggcaccgccgtctgccgcctgcgggccaccgac
cccgacctgggcgccaacggcgaggtgcggtacgccatcaatcgccggcagagcgacccc
gacggctacttcgcggtggaggagcgcagcggcgtcctgctcctccgccgcccgctagac
cgcgaggcgcgggccctgcaccgcctggtcgtggaggcgcgggacggcggcgcccagccc
gaggtctccagcgtcctcgtctccgtggccgtgctggacgtgaacgataaccggccctcc
atccgtctgctctacctcaccgagaccggcggcccgcgggtctccgaaggagcgcggccc
ggcgactacgtggcccgagtctccgtctcggacgccgacgaggagggcgcagagggcgac
ggcggcggcatcgcgctggccctgctgggcggcgacggcgccttcgccttgcggacggcc
ggggccggcgtcttcttcctctgcgtggcggggccgctggaccgcgaaagccgcgacctg
tacgagctgcggctggtggccacggacggcggcacgccgccgctctctgccgaggagccg
ctgctgctgcgcgtcgccgacctcaacgacgagacgcccgcgttcccgcagccccactac
cgcgccgccgtctcggaggccgcctcccccggcaccgccgtgctccgcctcagcgcctcc
gacgccgacgagccgggctcgcccaacgccgaggtgcggtacgcgctggagggcgacgcg
gccgccctggccctgctgcgcatcgacgcgcggagcggcgccgtcagcacccgcgcgcgc
ctggaccgggagcggcaggcggcgctggagctgcgcgtggtggcgcgggacggcggcgtc
ccgccgcgcgccgccgcgtgccgcctcagcgtgcgcgtggaggacgccaacgacaacgag
ccgcgcttcgagcgcgccgtgtaccgcgcgcgcatgcccgagcacgccgcgcgcggccgc
cgcctcctccaggtcaaagcaacagatgcagatgctgaccagtttggagaaattgagtat
tctctttacgatggatttaatttttatgaaaaatccaaagctttccagattgacccacac
actggtcagatctttgtgtctcaagacattgacagagaaggagatccaaccacttatgat
ctcttagtaaaagctacagatgggggtggtctgagtgcccaagcttttgttcgcatcgag
atagaagatattaatgacaatcagcctgtttttgaacaagacacctatgtgacaagtatc
agcagtcacacacacccaggaacagaaatcatcaatgttgctgccacagacagagattca
ggaatatttggcattgtcacatacgaattggtcccaggagacttttcttcttttttcaca
gtggattcatctacaggaattatttacctgacctcagctcttggccacataggacattct
gcattcttcctgactgtttctgcacgggatgggggtggccttccctctgccagcaatgca
gctgtcacagtaaatgtccttcagactgttttggtccctgccatatttgagagatcccgg
tatagcttttctgttccagaagatgcacctgaagacagcgtgattggcactgtaaaggcc
agagagcctccaaattcgctagaagtggtttcttacagaatttgctccggtgatccgcat
gggaagttctctattgacccccagtttggcattatccgcaccaagaaacagcttgaccac
gaagctcagtctgttgtggtgctcactgttcagtctcagctgggtgactcccccgtctac
agcagcactcaagtcaacatatctgtgacagacatcaatgacaacccccccgagtttctt
accaaatctgataaggtaaccatctcacatacccagcctcctggcactgctgtctacatt
gctcatgcagaagacaaagacagtggcctaaatggggcaatcaaatacagtattgcaagc
aagcagtcagatgcatttagcattgatccaagtctcggagtggtaaaccttaccaggaca
gtggtggcagaaaagcagcaggaatatactctgcatatagcagctgaagactgcgggagt
cctcctctgacttctttgctgatgttgacagtggttattgaagagcagaagatgggccct
actttggtcttccaaagcttggtgtatcaaatagaagtcagtgaagctacctctccaggt
gcccaaatccttcaggttcaagcccactcccttgatccacacagtgttacctccaatctg
aggtattccttagagcctagtactgattccattgcatttggaatcagctctgatactggc
tggatttatcttcggaaacacttgaactatgaatgcgcacagatgctgtgttttagagcc
ttggtcagcacgtctgaggacaaaaaccttaggcaaaatgcaagtacatctataatagtt
aacgtcctggatgaaaatgataattctcccatgtttttgcgtgagagctacttctttgaa
attgaggaaaatccgattcccagtggtgtggttggcaccattacagctgttgacaaagac
tcaggaagaaatggacagctttcctatttcctcttgtctgatggaaagtatttcaagatg
aattccaacacaggtgaaatcataaactgggcggcgctggaccgcgaggagcaggcacac
cacgagctgcaggtgctggtgacggacgcggggcagccccggcgcaacgccacggccacc
gtgcgcatcgccgtgcacgaccgcaacgaccacccgccatgcttcccccagggggcgctg
cgccgacaggttttggaagggcagccatcagggacacttgttgccaccatctttgcaaaa
gacttcgattctggaaacaacggtgttgtattatattcaatagaatcagaagaggatata
ggatactttcagattgatgctgtcagtggagagttaagaacaacccggcctctgtcacat
gctgagcgatctgactacagaatgatggtgatggccaaggaccaggggatgccttcgctt
caaggacgtgctgctgtttacatccaggtgatcccacttcccaacgggagatctggcttc
tttcagaatttcaagcactttgtcgtacctgaaaattttaaacctgcacaagtgttggat
tctctgaaggcgttgagtaaccatctagcacttaacaggaaactgcatttcagtattgct
aaagatgataatgttcattttgaagtagacagcttaacaggagacctttatctttccaag
gagctcgactatgaaacagattcacactttcttttgcaagttattataaaggattataat
aatcctccacaaaatagcactgtcttcctaagtattgatgtagaagataagaatgatcat
tctccacattttcaagatgactttgtagtgattggcatagaagaaaatgtacctgttggc
actctggtttacacattcaatgcaaaggatggagatggcggttttctgaacagcaaaata
gagtattccttagaaataagtaacacaggtgaaaatccatttcttattcaccctttgtat
ggcaccttgaccacagcttctccactggacagggagattactcgttctgtgatcttgaca
gtgtttgcagaagaccaggcgataaatctgactgatcgtcggctggattccctggctgtc
aaaattgttattttagatatcaatgacaacagtcccagttttacatcttcacgtctttcc
tatgtcatggaggatgtggaggtgggcttctttgtacaccacatagttgcaaaggatcct
gatgagggaagaaatggacaggttacatatcacattcttgcaggcaatgaaaacaaagca
tttgtactggataaaatcacaggactcttaactacagcccagtttctagaccgtgaggtt
caggagcgctacagtttgacagtcatggctcttgatgatggcagcccagctctctctgcc
acacaagttctaaccatcattgttcttgatgtgaatgatgaggccccgggattcctgaag
caactttatgagactgcagttcctgaaaaccgagatccaggggagtttgtcataagagtg
gaggctgtggaccaagatgcagggctgaattccttgcttcagtatgaaatcttaccagga
gctggttatgagaaattcaaaatgaactcggacagtggagagctcgtaacagctgcatca
ctggacagggaaacccaggaggttttcagtattaaagttttggttcgggacagtggaact
ccgtcgctgtcaagcacagtgacagtaatctgcacagtgctggatgaaaatgatcactct
cccacatttcttcttcctccttctgagatatttattccagagaaccaacagctttctgtt
gtttacattatccaggctgtagatatggatgctggcaataatggagctctaagatacaaa
ataactggtggaaatgttggagaatacttcacactaaataacacgtcagggaagctgctg
gtcactcgtagcttagacagagaagacatcagcaatttcactcttgtaattgagtgccat
gacctaggcagtcccttgagaagctccactgcacagctctatctaacagtcttggatgaa
aatgatcacagcccgttgtttgcgaagacccagtatcaaatctcagtgacagaagacctg
gaggaaggctcagccatcctggacctctctgcttctgatgaagacgctggcctgaatggt
gaagttatgtactcccttattgatgacacctatggagcatttgccatcaatagtgtcaca
ggatccattgttactacaaaggcactggacagggagaccaagtcccagtacacttttagg
gctgtggcaagtgactgtagcacccattttccaaggagcaccactgtcagtgttgtggtg
catgttaatgatgtcaatgacaacgatcctggttttttgcagaatcctatcagggtcttt
gtgcctgctgaaactgctgtgaatgagacagtagccactgtgagagcagaggacgtggat
ctgggatcaaatggagctgttgtttttaatttgatgatggcagaaactgtatttcaggtc
gatgtgaagacaggtgacatcattcttcgggagcccttggcttccaaggacttcagtacc
cagctgctagtgacagcttcagatcaaggcatcacacctcgaacagccacagctgtggtc
attatctttacagaagagcaagaggaagtgatctcattcagccacagcctgtacgaagca
agtgtgcctgagaacagtgcagcaggtacatcacttctaagagtagaagcctatgaacac
aaatttacaggagaagacataaaatatagcatcttcaatgaccaggaaatattctccata
caccctgtaacaggcacaatcacagtaaaagagccaaagtaccttgattatgaagataaa
cgtaaaatacatcttacagttgtggctgaaaatagcttcaattcagtgttctgcggagtg
acagttttgattcaagatgtgaatgacaatatacctaaatttgagcaaagctattataga
acatcaatatgggaaggccagagtcctaaaacagatatcatacaggtatttgcaactgac
cttgacagtgggctgaatggagaaactgaatactcaattgtatctggtaatgaaaatgca
acatttctaattgattcagcacgaggaattctagcaactaatacaggcctagattatgaa
aatgcttcatcttacaggttggttgtacaagctgctgataaagggaaccccagactgtct
gctaccactattgtgaggatacaagtgttagatgttaatgacaatgctccagttgtccaa
ccactaggtgaagaggaggtcccagaaaatgccctgcctggttttatagtgactcaagtg
tcagcaagtgatgcagactccaggccagcacttcagtttggttttatttatgataagagt
cctgaaatgaaatttgccattgatcagcatactggtgtcatcatagtggtggaaccatta
gattttgaagaaactgctgtgtatacgctgcatatcatagtttcagattctgtgcatcaa
acagaagcagaactgaccatccttgttttggacatcaatgataaccctccagtgtttact
caagatttttatcaggtgaacttgccagagctcatttctatggatgccactgttctgaca
ctctctgccatagacagggattctgaacataatggaatggtttcctacaaaatcctctct
tcccgtgagggattttccattgatcacaagaatggttcactgtttttcacggaaccagtt
atgcagctgaaaaatatttccattattcatctcctgatagaggccacagatggtggcagt
ctccctctgagtgcagttacctccatagaggtgcacatagaagatgtcaacaactgtgcc
cctcgcttcacaaaggctctgtacaatctcagtgtgagtgaggatgcctcagttggagaa
aacatcctcctgttctcagccatcgactgcgactggatgcgtgacaacacgtttgttgaa
tactccattattggtggcaatgctgagaatttattctctgtagaaacaagtgtcatgggg
tcagaaacatcctacaaacttgttggcagtcttgttttgagtagtgctcttgacagggaa
acagctgcttctcaccagttggttctccttgcctctgatcgtggaacaccctctttgaat
tcaactgctacagtgctaatcactgtgctggatgttaatgataaccctccagtatttagc
aactcagagtatcatgttcatgtcaaagaaagcatccccataggcagtcacatcactgaa
gtttcagcaaaagactgtgatgcaggcactaatgcagagatcacttatgctatcatctct
ggaaatgacagagggcatttttgcttggatggtagaacaggatctgtaaatttgacaaat
gcgctggattatgaggataccatgaaattcactttggttatccaagccacagatggagga
actgatgtaaaaaatatggcttttgctgttattcttgttagtgtcctagatgacaatgat
tatgccccgctttttttgtttcccagtctgagctgcactgtcagtgaaaatctgcctacc
ttttcttttgtgtgtgctgtttgtgcattggattttgataaaggctcctatgggtacctt
acctactccattcagtcttcatgtttgactcatcgtgaagctgctagagaccatgacatg
ttcttcattgatcctttaacaggagatattcatacaaagcaaatgtttgactatgaaagt
caaaataggtactgtctcataatccaagcaaaagacaaaggtgattcactggctaccact
acagttcaggtagatattgaggggagagatgaatttgatccagtgtttacacaagaacat
tatttctttaatcttcctgagaagaatgaagcaggccagttgattggtagagtgacagca
tcagacagtgatggtggactggacggagttgttcattactcccttctaaaaccttctcca
ttcttttctgtgaatcaaaccagtggcaatatttatttgactcagactgttcacagaagg
aaaaatggcatcaaaaggaatgatgatactctgaaattgttggtaagagctcatagccct
aaaattgtgtcaaggttcacagcatgcactgtttttgtgaatgtttccaattctcctgag
agtgatcccacagtgtcagcacacagcctgacagtaagtgtttccatctcactgatggtg
tttctgctgcttgccatcagtctgatcacacttactctgagacttaagcagaaagatctg
atgaatgcttgtgtgaaaagaaacccagtatcctcctcagctgctgatgtgaattcaata
agagaagacgaggactgccagaaaatccaaagtacagagagcagtatgcttcccatgggt
gctatagcaaaatggctgagcctagcaggacttggagaggggaaggatgatgatgtctcc
tgcaggcattcagactccagtggccatggttctgctgaaggggagactgcagaggacgag
gaaatcaaacggatctatgagtgtccttgcagaaaaagcattggctcagcactgagcgag
cacggctcgcagttgccagattcggggatcccaagacagtctgatcagttctcctatcat
tctgatgtcatagctaccatgcaaagcatggagaatgtgcagaccattaaaggagaaagc
agagaagaagcctgtgacacagcctatgcacacaaaatcttgtctcaaacacttacagaa
attggaataaaagaggaaggcatgatgacagaccacacaagagactatgtcctgatgcca
gatgggaaagactatgggtatgatttgcttgcaactgttggcatctcagatgaggatctc
agaggtggttataactgggattatgggcttagctgtgaacccagatttcaacctcttgcc
tcagtgtttaatgatattgcagaactgaaagatgaaaatgttcacattcacagcttctct
caggagaagaaatctcttgatttccctcctcccttgataacatcagtagcacagcctggc
ataaggacagtgccgccaagaatgccaaatataacatcagggcaagcttttaataaatgc
ccttattctcccattatccattatcatggataccctccaccaaccatgacccccagattt
tctcctactctctctttacttaccatgcagacaccttctgcttctccagtagtgtctgat
gggaaaatgataggaacctgtcttattgatccgagctatgatcttgcaacagaagaaaaa
attcaggtctag
DBGET
integrated database retrieval system
