Agelaius tricolor (tricolored blackbird): 139593312
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Entry
139593312 CDS
T10815
Symbol
RNF17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139593312 (RNF17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Agenet
YscO-like
Arg_repressor_C
Motif
Other DBs
NCBI-GeneID:
139593312
NCBI-ProteinID:
XP_071290218
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MSGMGEFSLLGDSNRELPRSRMKGVRQCAKLLEEHFTEPYQRNGDLCHMSKALSAEVLHG
DGKDEDTDLFCFSSAEDRTDFKFGLCGSSSERQARPFSHSIKEKNVQYPFSSNGGLSDGS
ALAPSADMENNTGQDIDEALGIAVSNLGHFCDASKVLEYLELKVKHKKDKVTEAADRTLD
ELITLLSRKRKSFAELKENINNYISSIAKTKEIIEEKKKHLTGAIRTAKELKFSHALRNC
CDLAQIIYDLKLPVEAELSRVKNLKDKILSRLFLNTFEITSSLENLGDIKQGMTRNEDNG
QDTLILDEQEETPDVIIEEILEDDMEGLTELVLVSHVINPCHFYIRRYSQKKEAFALQTK
LENFCCSKSSYLLPSDILELGARTFIKSKETGMWCRGTITELIPVESKNQRKKLCGPIRY
KVCDIALLKVFLIDFGSSVVLIFSGCEPTERPDPATLQIIETHDICLFVRKPDQHIEAEL
AAIPPLAVRCSLKDVVPKNEDEGWEEEAKTKFLEMVNNKVVSMMVFREEDGVLIVDLRKP
AFNEVSSNTPLSLKDALVFLDLARFKLQLPSQLENCTVLQYSPPNIPQEGEEVFVVVCHI
NSPSDFYLRLRESVESLALPEKIQEIYKQENGKNFEIFCPVEGQACIAKQEDGNWYRAQI
IGLPSCREVLVKYVDYGNIANLTHEDIRRVKQEFLSFPEKAIRCRLACIEPFKGADEWNR
EAKERFEEMTEDKLMLCSVIEILDNNILSIELFNASADNGKKFSINCQLVEEDLASYIPG
YTERTEVKPNEIWDDPLEEISKASEAFIPTDMESVDEGDFRALCNKELHGRISHVVSPSK
IFVQLLASEGILKRLQEEMASIYRESQPQSVKWEREMHCAVYVHDVGQWQRGQISRIVSE
TSAEVLLYDSGSEKTVEVSCLRKLEENMKTIRMLAMECSLTEIRPTGGSTQWTATVCECL
SYYLTGAQVKIVIQENVVGCALPVKILCKDETGKMTDTSEYLIEQGLALRNRRTGKANGA
CLVSKEHLEGHFEQENTQLDGCNSKIAYERNRTVPEENTTVSESEQKSLKIHKPLPHPEM
DEVYKSPIVPEAKVFQAVVSCIGGDGTIYIIPKSFETALNKLMAEIQNTFKGLGLLIPYC
WKKGEACVVRGSDTVWYRAKIVEVSGSTLQVQYIDRGYIESIPQCHLYPTTFYTGIPPFC
IPCQLYKTLPIGNFWQQEAVEYLQELLKNEEVEIHVKELPDNPWGKLSISLYFGGMSLSS
FMAYQRYCVAEDCQDIQKGVFEGDLSPSYLLQQLPVPGETFPVTVTHLVSPKEVYICLDS
SENLTERSATERSASCDSESLRKALKWCNKIVKTLPHLTNFKKELPCLAEYVDGLWYRAK
LLSITQLVPVQILVQFVDYGTYLVAPTSRLRHIPCHLLKYPVQAVRVLLAGFRPASDDKN
VERIPYSPEWSLKALWTMVDCVEGKRLSASILTVSPEVTISLYGDDKNLVHLKLIEMGLA
ELDQ
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaatgggagagttctctttgttgggtgatagtaatagagagcttcccagaagt
cgaatgaaaggtgtgaggcagtgtgctaagctactagaagagcattttacagagccatat
cagagaaatggtgatttgtgtcatatgtctaaagctctcagtgcagaagtgttgcacggt
gatgggaaggatgaagacactgatttgttttgtttctcttctgcagaagacagaacggac
tttaaatttgggctgtgtggcagcagctcggaaagacaagcaaggcccttcagtcacagt
atcaaagagaaaaatgttcagtacccattttcttccaatggtgggctgagtgatggatca
gctctagctccatcagctgacatggaaaacaacactgggcaagatattgatgaagctttg
ggcatagctgttagtaatcttggccacttctgtgatgcaagcaaggtgctggaatacttg
gagttgaaagtaaagcataaaaaagacaaagttacagaagctgcagatagaacacttgat
gaacttattactcttctgtcaaggaaaagaaaatcattcgcagaattaaaggagaacatc
aacaactacatttctagtattgcaaaaacaaaggaaatcattgaagagaagaagaagcac
ttgactggtgccattaggacggcaaaggaattaaaattttcacatgctttaagaaactgt
tgtgatctcgctcagattatttatgacttgaagttgccagtggaggctgagctctcaaga
gtgaagaatttaaaggacaaaatactttcaagattgttcctgaacacatttgagattaca
tcttcattagaaaatttgggagacattaaacagggaatgacaaggaatgaagataatggg
caagacactcttatccttgatgagcaggaagaaacacctgatgtcataatagaagaaata
cttgaagatgacatggaaggtttgacagaattggtgttggtaagccatgtgataaatcca
tgccatttctatattcggagatattcacagaagaaagaagcatttgctttgcagacaaaa
ttagaaaacttctgctgtagtaagagttcctacctcttgccttcagacattttggaacta
ggtgctagaactttcattaagagtaaggaaactggaatgtggtgccgtggaactatcact
gaactaattcctgtagaaagtaaaaatcagaggaagaagctttgtggtccaataagatac
aaagtgtgtgatattgcattgctgaaagtattcctgattgattttggaagctctgtagtt
cttattttctcaggatgtgaacccactgaaaggcctgatcctgctactctgcaaattatt
gaaacccatgacatttgtctgtttgtgaggaagcctgaccagcacattgaggcagagctt
gcagccattcctcctttagcagtacggtgttcactgaaggatgttgttcccaaaaatgaa
gatgaaggttgggaagaggaggcaaagacaaaatttttagaaatggtaaataataaagtt
gtttcaatgatggtgtttagagaagaggatggtgttctcattgtggatctgagaaaacct
gcatttaatgaagtaagcagtaataccccactgtctctcaaggatgcattggttttctta
gatttggcaaggtttaaattacagcttcccagccagttggaaaactgcactgtcttgcag
tacagtccaccaaatattccacaggaaggagaagaggtctttgttgtggtttgtcacatt
aatagtccaagtgatttctatcttcgcttgagagagagtgtggaatctttagctcttcca
gagaaaattcaggagatatataaacaagagaatggtaaaaactttgaaattttttgccca
gttgaaggccaagcatgcattgcaaagcaggaggatgggaattggtacagagcacagatt
atagggctgccaagttgtcgggaagttctggtaaaatatgttgactacggcaacattgca
aacttaactcatgaagacatacgcagagtgaaacaggaattcctgagctttccagaaaag
gcaatcaggtgtaggctggcttgcattgagccattcaaaggggcagatgagtggaacaga
gaagccaaggaaagatttgaagaaatgactgaagataagcttatgttgtgttcagttatt
gaaattttagataataacatcttatctattgagctcttcaatgcctctgctgataatggg
aaaaaattcagtattaactgccagctagttgaagaagacttagcatcctacatacctggg
tacactgaaagaactgaagtaaagcctaatgaaatatgggatgatcctctagaagaaatt
tctaaagcctcagaagcttttattcctacagacatggaatctgttgatgaaggagatttc
agagcactttgtaacaaggagttacatggaaggattagtcacgttgtgtctcctagtaaa
atttttgtacaattgctggcatcagaaggtatactgaaaagattacaggaggagatggct
tccatctacagagaatcccagccacagtctgtgaagtgggagagggaaatgcactgtgct
gtttacgtacacgatgtgggacagtggcagagaggtcagataagcaggattgtctctgaa
acaagtgcagaggtactactttatgattctggatctgaaaaaacggtggaggtcagctgt
ctaagaaaacttgaggaaaacatgaagaccatcaggatgttagcaatggaatgttcactg
acagaaataagacccacaggtggaagcacacagtggacagcaacagtgtgtgaatgcttg
tcctattacctaactggagcacaagtgaagatagtcatacaggaaaatgttgtgggttgt
gcattgcccgtgaaaattctttgcaaagatgaaacaggaaaaatgactgatacttctgaa
taccttattgaacagggtttggctcttagaaacagaagaactggtaaagccaatggggct
tgtttagtctccaaggaacatcttgaaggacattttgagcaggagaacacacagctggat
ggttgcaattccaaaattgcatatgaaagaaacaggactgttccagaggaaaacaccact
gtttcagagagtgaacaaaaatcactcaaaatacacaagccactgcctcatccagaaatg
gatgaagtatataaatctcccattgttcctgaagcaaaagttttccaggctgtagtgagt
tgtattggaggtgatggaactatttatataataccaaaatcatttgaaactgcactaaac
aaattgatggctgaaatacaaaataccttcaaaggccttggtctcctgataccctactgc
tggaagaagggagaagcctgtgttgtaagaggatcagatactgtgtggtatcgagctaaa
attgtagaagtcagtggtagtactctgcaggtacagtacatagatcgtggttacatagag
agcattcctcagtgtcacctgtatccaaccacattctacactggcattcctccattttgc
atcccgtgccagctctacaagacgctgccgattggaaatttttggcagcaggaggcagta
gaataccttcaagaacttctcaaaaatgaagaggttgaaattcatgttaaggagctacca
gataacccatggggcaagctgtccatcagcctgtattttggggggatgtcactttcatcc
ttcatggcataccagaggtactgtgttgctgaagattgccaggacatacaaaagggggta
tttgaaggagacctttcgccttcgtacctgctgcaacaactgcctgttccaggagaaacc
tttcctgtcacagttacccacctggtgtcccccaaggaggtttatatttgtcttgattct
tctgagaaccttacagagcgctctgccacagagagatctgccagctgtgactcagagagc
cttaggaaagccctgaagtggtgcaataaaattgtaaagacacttcctcatctaacaaac
ttcaaaaaagaactgccttgccttgcagagtatgtggatggtttatggtatagagcaaag
ctcctctctattacacagcttgtgcctgttcagattctggttcagtttgttgactatggt
acttacttagttgcccccaccagcagattgcgtcacataccttgtcacctgctgaagtac
ccagtgcaggcagtgcgagttctgctggctggatttagacctgcttcagatgacaaaaac
gtggaaagaattccttattccccagaatggagcctgaaagcattgtggaccatggtggac
tgtgttgaaggaaagcgtctctctgcttccatacttactgtttcaccagaggttaccatt
tctttgtatggagatgacaaaaatctggttcatctgaagctgatagaaatgggtcttgca
gagttggatcagtga
DBGET
integrated database retrieval system
