Agelaius tricolor (tricolored blackbird): 139593400
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Entry
139593400 CDS
T10815
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03440
Homologous recombination
Brite
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
139593400 (BARD1)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
139593400 (BARD1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
139593400 (BARD1)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
139593400 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139593400
NCBI-ProteinID:
XP_071290326
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MREALRGRSGNQPAPGSPLRPAAPSMAPPGHTWSHTRAALGRLEKLLSCSRCAGVLREPV
SLGQCEHVFCLSCVGDCVGTECPVCRMPAWVQDAQINRQLDNMIQLCSKLRQLLSTDTPD
SAEDTSTPPESELEKKSKKEQIKMWFSPRSRKIRCVVNRNQADTKSNDLGQDTSSVYDFF
PSPPHEKPSKPTKRPTQRQIKKMKKKHLADINKVWSLEKPEQQKAEKAPKDKCVTICSQP
VVLCTQEAESPEDRPQQESVKEADSSSNNNTEDMEVLPQVEKKGNSEAVCSARDSKENNG
AAEALLSIASEVTPLKRARGHSTLQGTPQAKRARRGERGIPGKAGRQADGLEESLQGSPI
SPATELTPVQISSSAPKLTATGMKTRRSAALQAINSPSLSESPSTPSTSKSCRQVAAPLS
PSVVKSPGVNSIARRNYKGETLLHVASIKGDLAAVEELLKNGADPNVKDNAGWTPLHEAC
NHGHREVVELLLQHRALVNTTGYQNDSPLHDAARNGHLAVVELLLLHGASRHAVNIFGLR
PVDYAESKKMKSLLMLPVKNESFSLTQPSEVLSSSQPRNGPLGILGSNLSVEQQKLLNKL
AAVLKAQRCTEFNSRVTHLVIPDVPMPTTVKCMMAVLTGCWVLKFEWVQACLQSSAREQE
EKYEVQGGPRRGRLNREQLLPKLFDGCYFYFLGPFKQHEKSDLLELVKAAGGQVLVRQPK
PDSDVTQAINTVSYHAEPTSDQRLCTHYVIYDVASKFQPEKIRQGKVWMAPSSWLIDCVM
SFQLLPVK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccaggcagccccctccgc
cctgctgccccctccatggcgccgcccgggcacacctggtcccacacccgcgccgcgctg
gggcggctggagaagttactgagctgctcccgctgcgccggtgtcctgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctgtcctgtgtgggtgactgtgttggcacc
gagtgccccgtgtgccgcatgccagcctgggtgcaggacgcacagatcaaccggcagctg
gacaacatgatccagctctgcagcaagctgcggcagctcctgagcaccgacacccccgat
tcagcagaggatacatccacaccacctgagtcagagttggaaaagaagagcaagaaggag
cagataaaaatgtggttcagcccaagaagcaggaagattcgatgtgttgtgaacaggaat
caggctgacactaaaagcaatgaccttggtcaagacacatcttcagtttatgatttcttc
ccttcccctcctcatgaaaagccctctaagccaacaaaaagaccaactcagagacagatt
aagaagatgaagaagaaacatctagcagacattaacaaagtgtggagcttagagaaacct
gagcagcaaaaagctgagaaggctcccaaggacaagtgtgtgaccatctgcagtcagcca
gtagtgctgtgcactcaggaagcagagagtcctgaggacagacctcagcaggagtctgtc
aaggaagctgactccagcagtaataataatacagaggatatggaagttctgccacaggta
gagaagaagggtaacagtgaggctgtgtgctctgcacgggacagcaaggaaaacaatggt
gctgcagaggcattgctgtcaatagccagtgaagtgacacccttgaaacgtgcaaggggg
cactccacacttcaggggactcctcaggctaaaagagcaaggagaggtgagaggggcatt
cctgggaaggcaggcaggcaggctgatggcttagaggagtctctgcagggctcccccatc
tccccagccactgaactgacaccagtccagatttcttcctctgcacccaaactcactgcc
actggaatgaagacaagaagatctgcagcccttcaagccattaacagtccttcactttca
gaatctccctctaccccatccacttccaagagttgcagacaagtagcagcaccactcagt
ccttctgtggtgaaatcccctggtgtcaactcaattgccaggagaaattacaagggagag
actttgctccatgttgcttccatcaagggtgacttagcagctgtggaggagctgctgaaa
aatggggcagatcccaatgtcaaagataatgctggctggacaccactgcacgaggcgtgt
aaccacgggcacagggaggtggtggagctgctgctgcagcaccgggcgctggtgaacacc
acgggctaccagaacgactcgccgctgcacgacgccgccaggaacggccacctggccgtg
gtggagctgctgctgctgcacggcgcctcccggcacgccgttaatatatttggtctgcgg
cctgtggactacgcagaaagcaaaaagatgaaatctctgctaatgttaccagtgaagaat
gaatcattttcacttacccagccctctgaggtgctgagctccagccagccaagaaatgga
ccccttggtatactggggagcaatcttagtgtggaacagcagaaattgctgaacaaatta
gcagcagtcctgaaggcccagaggtgcactgaatttaacagcagagtaactcaccttgtt
atccctgatgttccaatgccaaccactgtcaaatgcatgatggctgttctgactggatgt
tgggtcctcaagtttgaatgggtacaagcctgtctgcagagctcagctcgagaacaagag
gagaagtacgaagtgcaaggtggcccccggcgcgggcggctcaaccgggagcagctgctg
cctaagttatttgatggatgctacttctattttttgggacctttcaaacagcacgagaag
agtgacctgctggagctggtgaaggcagcaggtggccaggtgctggttaggcagcccaaa
ccagacagtgacgtgacacaggccatcaacacggtgtcctaccacgcagagcccacctct
gaccagaggctctgcactcactatgtcatctatgacgtggcttccaagttccagccggag
aaaatccggcagggcaaggtgtggatggccccctccagctggctcatagactgtgtgatg
tcatttcagctcctgcctgtcaagtga
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