Agelaius tricolor (tricolored blackbird): 139593719
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Entry
139593719 CDS
T10815
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139593719
Ion channels [BR:
atrc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139593719
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FraC
Lustrin_cystein
Chlamy_scaf
New_glue
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
139593719
NCBI-ProteinID:
XP_071291084
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MEQSVLVPPGPDSFQFFTRESLAAIEQRIAAEKAKNPKQDRKDDDENGPKPNSDLEAGKT
LPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTIG
ENGTLLNSTVTPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPSA
GGEAGGLSESSSDASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRK
GFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFAD
DEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVS
LVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTEPEMRKRISGSFHVSMDFLEDPALRER
AMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDL
AITICIVLNTLFMAMEHYPMTEEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGW
NIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNNL
QIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTVELSKD
HDYIKDANGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEF
SSESDLEESKEKLNSSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVRRFKCCQ
VSIEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLE
YADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFKG
WMDIMYAAIDSRDVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILICL
NMVTMMVETDDQSEEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVI
LSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVAT
EESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIAMD
LPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKRK
QEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGAGQGMKDEILIDKLNENSFTEKT
DITASTAVCPPSYDRVMRPVKEKHEKEDKDGQK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaattcttcactagagag
tctcttgcagctattgaacagcgcattgctgcagaaaaagccaagaaccccaaacaagat
cgcaaagacgatgatgaaaatgggccaaaaccaaacagtgacttggaggcaggaaaaaca
ctcccctttatatatggtgacatacctccaggaatggtgtctgagcccttggaagacatg
gacccatattacatcaataaaaaaacctttatagtattgaataaagggaaggcaatcttc
cgattcagtgccacctctgccctgtacattttaacacccttcaaccctcttagaaaaata
gctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttgacc
aactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtatact
ttcactggcatttacacatttgagtcactaataaaaatcattgcaaggggcttttgctta
gaagattttacttttcttcgagatccgtggaactggcttgatttcactgtcattaccttt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgagctttgaaaacaatatcagtcattccaggcctgaagactattgtaggagccctg
attcagtctgtgaagaagctctcagatgtcatgatcctgactgtgttttgtctgagtgta
tttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcagtgg
cctccagaaaattttactttggaaacaaatattacttcccagctaaacagcaccataggt
gaaaatggtacattgcttaattcaacagtgactccatttgactggaaggggtacattgaa
gatgaaagtcatttttattttctggaagggcaaaatgatgctctgctttgtggaaacagc
tctgatgctgggcagtgcccagaaggatatacttgtgtgaaagctggcagaaatcccaat
tatggctacacaagttttgacacattcagctgggcattcttgtcactgtttcggctaatg
actcaggacttctgggaaaacctttatcaattgactcttcgtgctgctgggaagacatac
atgatattttttgttctggtgatttttctgggctctttctatctgataaacctgatcctg
gctgtggtcgccatggcctatgaagaacagaaccaagcaaccttggaagaagcagagcag
aaggaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagcacag
gcagcagcggtggcagcagcagcagtaacagcatctgcagagtccagggagcccagtgct
ggaggagaagcaggaggcctctcagaaagctcctcagacgcgtcaaaattgagttcaaag
agtgcaaaagagaggagaaatagaaggaaaaaaaggaaacagaaagagcagtctggagga
gaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagaaggaaa
ggtttccgattgtctattgaaggcaatagactgacatacgaaaagaaatattcttctcca
catcagtctttgctgagcattcgtggctcgctgttttccccaaggcgcaacagcagaaca
agtcttttcagcttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgat
gatgagcacagcacttttgaagacaacgacagcagaagagattctctctttgtgccgcgc
aggcacggagaaaggcgcaacagcaacatcagccaggccagtaggtcatccaggatgctg
gcagtgtttccagtgaatgggaagatgcacagcaccgtggattgcaatggggtggtttcc
ctggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtgata
atagataagccagctactgatgacaatggcaccacgacagaaccagaaatgaggaagaga
atatcaggttcttttcacgtttctatggacttcttggaagatccagctttaagggaaaga
gccatgagtattgctagcatcctcacaaacactgtggaagaacttgaagaatcaagacag
aaatgcccaccatgttggtataaatttgcaaatattttcttgatctgggactgcagtccg
cattggttaaaagttaagcatatcgtcaacttagtggtaatggacccatttgttgacctg
gctattacaatttgcattgttttaaatacactctttatggctatggaacattatccaatg
accgaagaattcaataatgtactttcagttggaaatctggtcttcactggaatcttcaca
gcagaaatgtttctcaagataattgcaatggatccttactattatttccaggaaggctgg
aatatttttgatggctttattgtaacccttagcttggttgaacttggtcttgcggatgtg
gaaggactatctgttcttcggtcattcagattgttgcgagttttcaaattggcaaaatcc
tggccaacactaaatatgttgataaaaatcattggtaattccgtgggagctctggggaat
ctgaccctggtgctggccatcattgtgttcattttcgctgtggttgggatgcagctcttt
gggaaaaactacaaggaatgcgtctgcaaaattgcaagtgactgtgtgctccctcgctgg
cacatgcaagatttcttccactctttcctgattgtattccgagtgctgtgtggagaatgg
atagaaaccatgtgggactgcatggaggttgctggccaagccatgtgccttacagtcttc
atgatggtcatggtgattggaaacctagtggtactgaacctatttttggccttgctcttg
agctcatttagtgcagacaaccttgctgtgacagacgatgataatgaaatgaacaatctc
cagattgctgtggcaagaatgcagaaaggcatagattatgtgaagagaaaagcacgtgaa
ttcatccaaaaagcctttgttaaaaaacagaaagctttagatgaaatcaagccacttgaa
gatttaaacaacaaaaatagctgtatttctaaccatacaaccgtggaactaagcaaggac
catgactatattaaagatgcaaatggaaccaccagtggtataggcacaggcagcagtgtg
gaaaaatacataattgatgagagtgattacatgtcattcataaacaacccaagccttact
gtgacagtgcccattgctgtgggtgaatccgactttgaaaatctaaacacagaagaattt
agtagtgaatcagacctggaagaaagcaaagagaagttaaattcatccagttcatctgaa
ggcagcacagttgatattggacttcctgcagaagaacaaccagaagctgaacctgaagaa
gcccaggagccagaggcctgcttcacagaaggctgtgtaagaaggttcaaatgctgtcaa
gtaagtatagaagaagggagaggaaaacagtggtggaaccttagaaaaacctgcttcaga
attgttgaacacaactggtttgagactttcattgtctttatgattctcctcagtagtgga
gctctggcttttgaagacatatatattgaacaacgtaaaactatcaagaccatgctggaa
tatgctgacaaggtcttcacttacatcttcattctggaaatgctgctgaagtgggtggcc
tatggctaccaaacatattttactaatgcctggtgctggctggacttcctgattgtcgat
gtctctttggttagcttaacagcaaatgcattgggttactctgaacttggtgccattaag
tcccttaggacactaagagctttgagacctctaagagctttgtcacgatttgaaggcatg
agggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctcgtt
tgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaagttc
tactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaatttt
agtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtgaaagta
aactttgataatgtaggatttgggtatctttctttacttcaagtagctacatttaaaggc
tggatggatattatgtatgcagctattgactcaagagatgtgttagatcaacccaagtat
gaagacaacttgtatatgtacttgtattttgtcatctttataatttttgggtcttttttc
accctgaatttgttcattggtgtaattattgacaacttcaatcagcaaaaaaagaagttt
ggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatgaaaaag
ctgggatccaaaaaaccacaaaaacctataccaagaccagggaataaattccaaggaatg
gtctttgattttgtgacacagcaagtatttgacatcagcatcatgattcttatttgtctt
aacatggttaccatgatggtagaaactgatgaccagagcgaagaaatggaaaatatttta
tactggataaacctcgtgttcattgtccttttcactggagaatgtgttctgaaattaatt
tcacttcgccattactacttcactataggctggaacatttttgattttgtggttgtcatt
ctctctatagtaggaatgtttttggctgagatgattgagaagtactttgtatctcccaca
ctattcagagtcatccggcttgccaggatcggtcgaatcctgcgcctcattaaaggcgct
aagggaatccgcactctgctttttgctttgatgatgtctcttcctgctttgttcaacatt
gggctgctgctcttcctggtcatgttcatctatgccatatttggcatgtccaactttgcc
tacgtcaagagggaagctgggattgatgacatgttcaactttgaaacgtttggcaacagc
atgatctgcctgttccagatcaccacgtccgctggctgggacggtttgctcgccccaatt
ctcaacagtggggagccagactgtgaccctaacaaggctcatccagggagctctgtgaaa
ggtgactgtggcaacccttctgttgggattttcttctttgtcagctacattatcatatcc
tttctggtagtggtgaacatgtacattgctgtgattttggagaactttggtgttgctaca
gaagaaagcgctgaacccttgagcgaggatgactttgagatgttctatgaagtctgggag
aagtttgatcctgatgcaacacaattcatggaatttgagaaattgtctgattttgcagca
gcacttgagcctcctcttcatctacccaaacccaacaaagtccagctcattgcaatggat
ctgcccatggtgagcggtgacagaattcactgccttgacatcttgtttgctttcacaaag
cgtgttttgggggaaagtggggagatggacgccctcagaatacagatggaagatcggttt
atggcatccaatccttctaaagcttcctatgaaccaattacgactacattgaaacgaaag
caggaggaggtgtctgctgtcatcattcagcgtgcttacagacgtcacctcttaaaacga
acagtgaaacaagcttcctttatctataacaaaaataaaactgaaggtggggctggtcag
ggtatgaaagatgaaatccttattgacaagttaaatgaaaactcattcacagagaaaaca
gacataaccgcatcaacagcagtttgtccgccttcttatgatcgtgtaatgaggccagtc
aaagaaaagcatgaaaaggaagataaagatggtcagaaataa
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integrated database retrieval system
