Agelaius tricolor (tricolored blackbird): 139593818
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Entry
139593818 CDS
T10815
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03022
Basal transcription factors
atrc03420
Nucleotide excision repair
Brite
Enzymes [BR:
atrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139593818 (ERCC3)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139593818 (ERCC3)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139593818 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139593818
NCBI-ProteinID:
XP_071291304
LinkDB
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Position
Unknown
AA seq
805 aa
AA seq
DB search
MVSPPLAALPCGSDARAGAARRAAAMGRKERDKKKSKKRHYDDDEDDEDEGAGKEPQEAV
PSAAGKQVEESGTKVDEYGAKDYRLQMPLKADHSSRPLWVAPDGHIFLEAFSPVYKYAQD
FLVAIAEPVCRPTHIHEYKLTAYSLYAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKL
CTVSYGKVKLVLKHNRYFVESTHPDVIQQLLQDHVIKECRLRNAEGEETELITETFTSKS
AISKSSEGGLGPSTSQGTDVQNKPDVPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIE
ELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVI
VLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKD
KPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIV
QAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEF
YREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAVRLGKP
YIYGPTAQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQ
RLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE
EELSFSTKEEQQQLLQKVLQASDLDAEEEVVAGEYGSKSTQVSRRAGTMSSMSGADDTVY
MEYHASRSKASSNKHIHPLFKRFRK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctcctcccctcgcggcgctgccctgcggaagtgacgcgcgggcgggcgcagcg
cggcgcgcggcagccatgggcaggaaggagcgcgataagaagaagtccaagaagcgccat
tacgatgacgacgaggacgatgaggacgaaggtgccgggaaggagccgcaggaggcggtg
ccgtcggcggcggggaagcaggtggaggagagcggcaccaaggtggacgagtacggcgcc
aaggactaccggctgcagatgccgctgaaggccgaccacagctcgcggcccctctgggtg
gctcctgatggccatatatttttggaagccttttctccagtttacaaatatgcacaagac
tttctggttgccattgctgagcctgtgtgcagacccacccatattcacgagtacaagctg
actgcttactccctgtatgctgctgtgagtgtgggcttgcagacaagtgacatcactgag
tatttgcagaaactcagcaagactggtgtcccagatggaataattcagtttatcaagctg
tgcactgtcagctatgggaaggtgaagctggttctgaaacataacaggtattttgtggaa
agtacccacccagatgtcattcagcagcttctgcaagaccatgtaattaaagaatgtcgc
ctgagaaatgctgaaggtgaagagacagagctgattacagagacattcacaagtaaatca
gcgatttccaaatctagtgaaggtggccttggtccatcaacttcacagggaacagatgtt
cagaataagccagatgtcccagctgacttgtttgagttttatgaacagatggacaaagat
gaggaggaggaggaggaaacgcagacggtgtcttttgaagtcaagcaggagatgattgaa
gaacttcagaagcgttgtatccatttggagtaccccttgctagcagagtatgatttcaga
aatgattctgtgaatcctgatatcaatatagatctgaaacctactgcagtcctcaggccc
tatcaagagaaaagcctaaggaagatgtttgggaatggacgagccaggtctggtgttatt
gtcttgccatgtggtgctggcaagtctctggtgggggtgacggccgcgtgcactgtgcgc
aagcgctgcctggtgctcggcaattccgccgtgtctgtggagcagtggaaggcccagttc
aagatgtggtccaccatcgacgacagccagatctgccgcttcacctctgatgccaaggac
aagcccattggctgctctgttgccatcagcacatactccatgttggggcacacgactaaa
aggtcttgggaagcagaaagggtaatggagtggcttaaaagtcaagagtggggccttatg
atactggatgaagtccataccattcctgcaaaaatgttcagacgtgtgctcactatcgtc
caagctcactgtaaactggggctgactgctaccctggtcagagaagatgataaaattgtt
gacctgaacttcctgattggaccaaagctctatgaagccaactggatggagctgcagaac
aatggctacattgctaaagtccagtgtgctgaggtatggtgcccaatgtcacctgaattt
tacagagaatatgtagctattaaaacaaagaaaaggatactgctctacaccatgaaccca
aataaattcagagcctgtcagttcctgattaagtttcacgagcgacggaatgataaaatc
atcgtctttgctgacaatgtgtttgcactgaaggaatatgcagtcagacttgggaaaccc
tatatctatggtcctactgcgcaaggggaaagaatgcaaattctacagaacttcaagcac
aatccaaaaatcaacactattttcatttccaaggtaggggacacatcctttgatctgcca
gaggccaatgttctcatccagatctcatcccacggtggctcacggaggcaggaggctcaa
aggctgggacgagtgctgagagccaaaaaaggcatggttgcagaggaatacaatgccttt
ttttattcccttgtatcccaagacactcaggaaatggcatattcaacaaaacgacaacgg
tttcttgtagatcaaggttatagcttcaaggtaatcacaaagctggcaggcatggaagaa
gaagaactttcattttcaaccaaagaagaacagcagcagcttctccagaaagtcctgcaa
gcatctgacctggatgctgaggaggaagtagttgctggagaatatggttcaaagtcaact
caggtgtcgcgccgtgcaggcaccatgagctccatgtccggggcagatgacacggtgtac
atggagtaccacgcgtcccggagcaaggcgtcctccaacaagcacatccaccccctgttc
aaacgcttccgcaagtga
DBGET
integrated database retrieval system
