Agelaius tricolor (tricolored blackbird): 139593842
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Entry
139593842 CDS
T10815
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1
KO
K16578
CLIP-associating protein 1/2
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139593842 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atrc04812
]
139593842 (CLASP1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
139593842 (CLASP1)
Cytoskeleton proteins [BR:
atrc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
139593842 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
Sec7-like_HUS
RTP1_C1
HEAT_DAAF5
PDS5
ParcG
MMS19_N
MMS19_C
XRN_M
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
139593842
NCBI-ProteinID:
XP_071291353
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDIISALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIME
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMVQTSVDKI
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAPLGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSAGASTPFSSAAALPPGSYASLGRIRTRRQSSGSATSVTSTPADT
RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSSYGGLSSGTSRVQAVPSSSEKRSK
IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLASRRHS
RSTSALSTADSVGQSDRFGLGQPGRMPASVNAMRVLSTSTDLEAAVADALKKPVRRRYEP
YGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLIG
LQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFV
LLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAI
LKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEF
TMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRHSSSRTSPLTSPTNCS
HGGLSPSRLWGWSADGLSKHPPPLSQPNSIPTAPSHKTFRRSYSPSMLDYDTENLNSDEI
YSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGLALPSGDVRGSGDMVEGG
RMALDNKTSLLNTQPPRAFSGPRAREYNPYPYADTINTYDKTALKEAVFDDDMDQLRDVP
IDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVWEEHFKTILLLLLETLGD
KDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASS
IHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQLLPDIIPGLLQGYDNTE
SSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTH
S
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtactgcttagcgcaggtgctgcagaaggatgttggaaaaaga
cttcaggttggccaggaattgatagattatttctcagataaacagaagtcagctgatctt
gaacatgatcagactatgctggataaaatggttgatggactggccacttcttgggtaaat
tccagcaattataaggtggttctcctggggattgacatcatctctgcactggtgtcccgc
ttgcaagatcgcttcaaggcccagattggcacagtgctgccaagtttacttgataggctg
ggagattctaaggactcagtgagggagcaggatcagaccttgctgctgaaaatcatggaa
caagctgctaaccctcagtatgtgtgggacaggatgctgggaggattcaaacacaagaat
tttcggacaagagaagggatttgcctctgccttattgcaacactcaatgcatctggagct
cagagtttaacactgagtaagatagtgccacatatatgtaacttacttggagatccaaac
agccaggttcgagatgcagcaataaacagccttgtggaaatttacagacatgttggtgag
cgtgtaagggctgatctcagtaaaaaaggattaccccagtctcggttgaatgtaattttt
acaaaattcgatgaggtccaaaaatctggaaacatggtccagacttcagttgataaaatt
tttgatgatgaagactccgtggatgggaacagaccttcctcagccagctcctctacatct
tcaaaggcccctgcaaactcacgcagagttgggatgggcactacccgcagacttggctct
gcacctctgggctccaagtcttcaacagccaaagagggggcaggtgctgtggatgaagaa
gacttcattaaggcatttgaagatgtccctacagttcagatttattccagccgggatctt
gaggaatccataaacaagatcagagagatcctatcagatgataaacatgactgggaacag
agagtttctgcgttgaaaaagatccgctccttacttttggctggagctgcagaatatgat
aacttcttccagcacttaagacttttggatggagcatttaaattatctgctaaagacctg
cgctctcaagttgtcagagaggcttgtatcaccttgggacatttgtcatcagttctggga
aacaagtttgaccatggggcagaagccatcatgccaacaatttttaacctaattccaaat
agtgccaaagtcatggccacttctggtgttgtagcagttagattaatcattcgacacacg
cacatccctcggttaatacccatcataaccagtaattgtacctccaagtctgttgcagtt
agaaggcgctgctttgaatttttagacttgctgttgcaggagtggcaaacacactcctta
gaaagacacatatcagtgttggctgaaacaataaagaagggaattcatgatgcagactct
gaagctaggatagaggcaagaaagtgctactggggtttccacagtcacttcagcagagag
gctgagcatttgtaccacaccttggagtcttcctaccagaaggccctgcagtcccacctg
aagaactctgacagcatcgtgtccctgccacagtcggatcgctcctcctccagctcccag
gagagtctcaaccgtccactgtctgccaaaagaagtcctactggaagtacaacatcaaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcgatcccgcagt
gacgtcgatgtgaatgcagcagctagtgccaagtcaaaagtgacgtctgctggagcatcc
acccccttcagttctgctgcagccttgcccccagggtcatacgcatcactaggccggatc
cgcaccaggaggcagagctctggcagtgccaccagtgtcacctccacgcctgccgacacc
cgaggccgcagccgcgctaaagtggtgtcccagtcccagcgatccagatcagctaatcct
gctggtgctggtagccgctctagttctccgggtaagctcttaggaagctcctatggtggc
ctgagcagtggaacatcccgagtccaggcagtgccatcctcctcagagaagcgcagcaag
attcctcggagccagggctgcagccgggagacgagtcccaacagaataggcctagcacgg
agcagtcgcatcccccgacccagcatgagtcaggggtgcagtcgtgataccagccgtgag
agcagtcgagatacaagccctgctcggggcttccctccacttgcttctcgacgtcattcc
aggtccactagtgctctctccactgctgattctgttgggcagtcagaccggtttgggctc
ggacagccaggcaggatgcctgcttctgtgaatgccatgcgagtcctgagcaccagcaca
gatctggaggctgctgtggccgatgcactgaagaagccagtgaggaggaggtatgagccc
tatgggatgtactcggatgacgatgccaacagcgacgcttccagcgcctgctcggagcgc
tcctacggctccaggaacgggggcattccgcactacctgcgccagaccgaagatgtggct
gaggtcctcaaccactgcgccagctccaactggtctgaaaggaaagaggggctcataggc
cttcagaatctactgaagagccagaggacactgagccgagtggagttaaaaaggctgtgt
gaaatatttactcgcatgtttgctgaccctcacagcaagagagtcttcagcatgtttctg
gaaaccctggttgatttcatcatcattcataaagatgacttgcaggattggctttttgtt
ctcctgacccagttgctaaagaaaatgggagcagatttgttggggtctgtgcaggcaaag
gttcagaaagctctggatgtcaccagggattcttttccatttgatcagcaatttaacatt
ttgatgaggtttattgtagatcagacccagacaccaaacctgaaggtcaaagttgccatc
ctgaagtatattgagtccttggcaagacagatggatccaacagactttgtgaattccagt
gagacaagacttgctgtatctagaattataacttggactacagaaccaaagagctcagat
gtgagaaaggcagcacaaatagtcctgatttctctctttgaattgaacactcctgagttt
accatgttacttggtgccttgccaaaaacattccaggatggtgctaccaagctcctgcac
aaccacctcaagaactccagtaacaccagtgtgggttcccccagcaatacccttggtcgg
actccttcccggcactccagcagcagaaccagccccttaacttcacctaccaactgctcc
catggtggactgtctccaagtcggctctggggttggagtgcagatgggctgtcgaagcac
ccccctcccctttctcagcctaactccatccccactgctccttcccacaagactttcaga
cgctcttactctcccagtatgctggattatgacacggagaacctaaactctgatgaaatc
tacagctctcttcgtggagtcacagaagcgattgagaaatttagtttccgtagtcaagag
gacctgaatgagccaatcaaacgtgatggaaagaaggactgtgacattgtgtctcgggat
ggtggccttgctctccccagtggcgatgtccgcggaagcggtgacatggtggaaggcggc
aggatggctctggataacaaaacctccctcctgaacacgcagcctccccgcgccttctca
gggccccgtgctcgggagtacaacccctatccttacgctgacaccattaacacttacgac
aagactgccctgaaggaagcagtgtttgatgacgacatggatcagctccgggatgtaccc
attgaccattcggatttggtggctgatcttctgaaagagctctccaaccacaatgaacgg
gtggaggagcggaaaggagctctcctggaactgctgaagatcacaagggaagataatctt
ggagtttgggaggagcatttcaaaaccattttgctcttgctgctggaaacgcttggagac
aaagatcattcaatcagagccctggcactgcgtgtcctgagggagatcctgcggaaccag
ccggcgcggttcaagaactatgcggagttgactatcatgaaaacgctggaagcacataag
gattcccacaaggaggtcgtcagagctgctgaagaagctgcttccaccctggcgagctcc
atccaccccgagcagtgcatcaaggtgctctgccccatcattcagactgcagactatcca
attaacttagctgccatcaaaatgcaaacaaaagtcatcgagaggatttccaaggaatcc
ttgcaccagctcctacctgatatcattcctgggttgttacagggttatgataacacggag
agcagtgtcagaaaagccagtgtattttgccttgtggctatttattcagtaattggagaa
gaactgaaacctcatctcgcacaactcacaggaagcaagatgaagctactaaacttgtat
ataaagagggcacagaccaccaacagcaacagcagctcctcttcagatgtttcaacgcac
agttaa
DBGET
integrated database retrieval system
