Agelaius tricolor (tricolored blackbird): 139593866
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Entry
139593866 CDS
T10815
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04145
Phagosome
atrc04148
Efferocytosis
atrc04510
Focal adhesion
atrc04512
ECM-receptor interaction
atrc04810
Regulation of actin cytoskeleton
atrc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139593866 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139593866 (ITGB5)
04148 Efferocytosis
139593866 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
139593866 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
139593866 (ITGB5)
04810 Regulation of actin cytoskeleton
139593866 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139593866 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139593866 (ITGB5)
Membrane trafficking [BR:
atrc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139593866 (ITGB5)
Cell adhesion molecules [BR:
atrc04515
]
Integrins
Integrin beta subunits
139593866 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
DUF2975
Motif
Other DBs
NCBI-GeneID:
139593866
NCBI-ProteinID:
XP_071291416
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MPRRGGLPAPAAARRPPPLLLLRLLLLAAPLQPGRGLNLCTSGSATSCEECLLIHPKCAW
CSKEDFSSTKSITSRCDFLQNLLANGCAGAIENPSSSISVVRNVPLSSKGSGQSHLDVTQ
ITPQKVALNLRPGDRTSFRVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPSCVPSFGFRHLLSLTDKVD
RFNEEVRKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGK
LGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKSHYMLYKNF
TTLIPGTTVEILHKDSKNIIELIVKAYNSIQSKVELTVWDSPEDIGLTFTATCQDGLSYP
GLRKCGDLKIGDTVSFEVAVEARSCPAEDASHSFTIKPAGFRDTLEVAVSYRCQCGCTGR
AAPASAKCSGNGTYACGLCECEPGYLGARCECREGAMGELHHALCREAEGKPLCSGRGEC
SCNQCQCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCS
TETDSCVSSDGQMCSGRGACVCGRCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFN
SGRLADNQTCQKHCKDEIITTVDVLETDDPNAILCAYPVNNCVMKFTYMELPSGKSNLTV
LKEPACSSAPSAVTIVLAVIGSVVLIGIILLALWKLLVTIHDRREFDRFQSERSRARYEM
ASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgaggggggctgccggcccccgccgccgcccgccggccccccccgctcctc
ctcctgcgcctcctcctcctggccgccccgctgcagcccggcagaggtctcaatctgtgc
accagtggaagcgccacgtcctgtgaagagtgtctcctcatccatcccaagtgtgcctgg
tgctccaaggaggatttcagcagcacaaagtccatcacatcccggtgcgacttcctgcag
aacctgcttgccaacggctgcgccggagccatcgagaaccccagcagcagcatcagcgtg
gtgaggaacgtccccctgagcagcaagggctctggccagagccacctggatgtcacgcag
atcacacctcagaaggtcgccttgaatcttcgtcctggtgaccggacctcgttccgagtg
caggtgcggcaggtggaggattaccccgtggacctctactacctgatggacctgtccctg
tccatgaacgacgacctggacaacatccgcaacctgggcaccaagctggctgaggagatg
aggaagctcaccagcaacttccgtctgggctttggctccttcgtggacaaaaacatttct
cctttctcctacacggcgccaagataccaaaacaatccctgcattggttacaagctgttc
cccagctgtgtcccatcctttggcttccgccacctgctgtccctgacggataaagtcgac
cgtttcaacgaggaggtccggaaacagaaagtttcccgcaaccgagatgctccagagggc
ggctttgatgccattttgcaggctgctgtgtgcaaggagaagatcggctggcgtaaggag
gcctctcacctgctggtcttcaccacggatgacgtgccccacatagccctggatgggaag
ctgggggggctggtgcagccccacgatgggcagtgccacctgaatgaagccaacgagtac
agcgcgtccagccagctggattatccttccctggcacttcttggggagaaacttgctgaa
aacaacatccacctgattttcgctgttacaaaaagtcattacatgctctacaagaacttt
accactttgatccctggaacaacagtggagattttgcacaaagattccaagaatatcatt
gagctgattgtcaaagcctacaacagtattcagtccaaggtggagctcacagtctgggac
agccctgaggacattggcttgaccttcacagccacctgccaggatgggttgtcctatcct
gggctcaggaagtgtggggacctcaaaattggagatacggtgtccttcgaggtggccgtg
gaggcgcgcagctgcccggccgaggacgcgtcgcacagcttcaccatcaagccggccggc
ttccgggacacgctggaggtggccgtgagctaccgctgccagtgcggctgcaccggccgg
gccgcgcccgccagcgccaagtgcagcggcaacggcacctacgcctgcgggctgtgcgag
tgcgagcccggctacctgggggcccgctgcgagtgccgggagggcgccatgggcgagctg
caccacgcgctgtgccgcgaggccgagggcaagcccctgtgcagcggccggggcgagtgc
agctgcaaccagtgccagtgctacgagagcgagttcggcaacatctacgggcccttctgc
gagtgcgacgacttctcctgcgccaggtacaagggagtcctctgctcaggtcacggggag
tgtcactgcggggagtgcaagtgccacgccggctacatcggggacaactgcaactgctcc
acggagacggacagctgcgtgtccagcgacgggcagatgtgcagcggccggggcgcctgc
gtctgtgggaggtgccagtgcaccgagccaggggctttcggagagacctgtgagaagtgt
cccacctgccccggtgtctgcagcactaaaagggattgtattgaatgcaagctgtttaac
tcaggaagactggctgataaccaaacctgccaaaagcactgcaaggatgagatcatcacc
actgtggatgttcttgaaacagatgaccccaatgcgatcctctgtgcctacccagtgaac
aactgcgtcatgaagttcacctacatggagcttcccagtgggaaatccaacctcaccgtc
ctcaaggagccagcctgcagctcagcccccagtgctgtgaccatcgtgctggcagtgatt
ggcagcgtggtgctgattggcatcatcctgctggcactctggaagctgcttgtcaccatc
cacgacaggcgggagttcgaccgattccagagcgaacgttcccgtgccagatatgaaatg
gcatccaatcctctctaccgaaagcccatttccacgcataacgtagagttcacgttcaac
aagctcaacaagtcttacaacggtacagttgactga
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integrated database retrieval system
