KEGG   Agelaius tricolor (tricolored blackbird): 139593948
Entry
139593948         CDS       T10815                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1
  KO
K11138  telomere-associated protein RIF1
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atrc03032]
    139593948 (RIF1)
DNA replication proteins [BR:atrc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    139593948 (RIF1)
SSDB
Motif
Pfam: Rif1_N Polysacc_syn_2C HtaA
Other DBs
NCBI-GeneID: 139593948
NCBI-ProteinID: XP_071291612
LinkDB
Position
Unknown
AA seq 2281 aa
MSAPGPHPEPAAPGPEPEPAAPQPAAGSSLGPLLHTLEDPGAPLGELTDAHLTIVSRLSG
EGGKAFTADFRKHFPQLCKVFKAHISSPNLELSNAALQALGFCTFNSNNTAELSGTEMQE
LLAAVNSVALKCSDKNTRTRALWVISKQAFPPEVVRKEVSNILCTLETILTKGEVQSVVV
EYEALNVIIRLMEQAPAQMGEEAVRWAKLIMPLVVHSAHKVQLRGATALEMGMPLLLQKQ
QEVAAVTEHLMTTKLISELHKLFSSKNETFVLKLWPLFVRLLGKTLHRSGSFINSLLQLE
ELGFRSGSPVVKKIAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTK
LEVWWYLLMRLGPHLPSNFEQVCVPLIQSTLSVDPAAFPGTPSRPNNPSLGPAAPGQKPG
PLLLVSPGTPRVALNSPAGGQLFPSIQLLAMEMLLHFLLGPQVVDFAKHNKLVLSLEPLQ
SPLISSPSFFCKHASTLINAVQDGFLAIGKEVPDCLLNVIWKDMNGYVKTAIEAGNKKEK
GGSEILTMLLQALKNIVRSNALPVQRVLSLIDITVKELPPKVLGSPAYQVADMDLLNGTP
ALFLIQLPFHNNLLESCVADERFFGILEALVGFALSGPTSALAFSESVLCVIDQSAGQVG
NKEHLCRMWSIVVNPLTEWINQNNEVNQGDALEHNFSAVYSALMLPVSHIFPSQGFPQAT
LKSLLRSWSDLYRAFARCAALVATAEENLCCEELCAKIIAGLEGETPVVFSMLEGLTHLV
SVMVDCINFAPYGTKFQPKNRSPQTPTDWAKKKKEPLGKLSSLLKLLLLLLNSFHELSCT
EQPAEPLLALGLALLAALHGLVSHISLPSLLGTALGTFSRALALFYEKTRLPEAPKVYSN
LSNKLEKLLAEILQCLQCHCPGSCDSELLRQLSPVLCAAFQHRSKQIRQQSAQLWNCTFA
KASALAYPEELKSVLSQAKKKIPLLLPGFESIEVSEECSGPFSDLMENSQLDAKISGMEV
KVGQKRDSILAQTSEAKSDGKDKSSNGQATPAKLKLEFPSPKTTSETLLEEEKSVDFVFI
PPETKPRILTEHQKEVLRSKRADIPAMYNNLDASQDTSTFSQYSQSQEDSLEMPPAVENA
KEDPANQPQEEKVGSEGCRSEESPACTSAEETKNESAEMIPEETSIGEALETSSVEAAPQ
EASAGKEDTSDVPSSSAGKEDTADVTSSSASSDIVSGTPQPVSRRQSFITLEKFGAAESR
PFSPAPLSSVSELAGTPAEAAQESSSDSRAGARAEKPGEEDKNPPKAEGAARRMTRRQSR
MELQGSKPKVQGRPEEPLAPESLESGAELGSAVQDVEHILLSHSQALLSTEADIQRAEDA
IAEMEKAQGLDTDSKENTPPESSSCPEQAPGEDSQVPQVSPQQKQLRRSSRRRSEPAESS
SGSQEREDGLPKRDRRKEEEKAGQKKLSQGKADGSQKQKGIPGKAAENTKESSQPERVAE
EWSSKDSPALRGLEEEGSRGGRRAEDAPRAEGEGQGSLSTAGQKVERPRYHTRRSSQGLL
SSIENSEADSSEGREESTKKKKPVKVRSRSNSLEGKLKEGQAGSQSPEGSAQGSETKSAQ
EASKAEPEVGTGAAVPAEPGGLEKQEIAAAAGEAVGSGSSEHPGALQDTSVEPGKGDAPM
ESLCSPCVSEQDGRAAEERHSSTGDSSVQSPECHNKRSKRVKKIKSCDCCFKKPKQQVTE
SKLSESKKEKGPELEEPEMTPAQSPAQSPAQNVSAPSDLEESLALAPCGMSTPLHPPEEP
STFSLDRQEMDVENLQGSSVGVEEENPEDPEGSAPEITESMEEIEEPAEQKEPTEQVLPE
SVPEEPRESGLDSGDQGEEPAAAEEEEIKENGQLEEEPEELDVDSKPEEKEMKGLEGNQE
DKGEAENSAGETCVIPDQEMKEELLETEIKVPENVALADQSVDSPLKVEGEPPVQVAESP
TSLQARCTWSPSASPSTSILKRGVKRSQEDDSLSPANKIRRVSFANPIFQEGLADDIDRR
SPVIRSHSSPSSRSLKILSNMQHITTPTKGFLSPGSRTLKFKSSKKCLITEMAKESLPCL
SEFVYPALAGCKAPVDVILPQITSNICARGLGQLIRAKNIKTVGDLSTLTALEIKTLPIR
SPKVSNVKRALKGYHEQQVKSRVLEESTVPEDAEKPGNDVEEKSLSGEEEKLAADLLDTG
SSSSSGEQPPMDLLGQVQALAAQLSCQDLRAYSGRQLLEMQEKLLAMASSITRSLQAQGP
E
NT seq 6846 nt   +upstreamnt  +downstreamnt
atgagcgctcccggcccccatcccgagcccgccgcgcccggccccgagcccgaacccgcc
gctccccagcccgccgccggctccagcctcggcccgctgctccacacgctggaagacccc
ggcgcgccgctgggagagctgacggacgcgcacctcaccatcgtcagtcgcttgagtggt
gaaggaggcaaagccttcactgcagatttcaggaaacacttccctcaactctgcaaggtg
ttcaaggcacacatttccagtccaaacttggagctcagtaatgcagcattgcaggccttg
ggcttctgcacttttaattcaaacaacacagctgaattatctggcactgagatgcaggag
ctgctggcagcagtgaacagcgtggctctgaaatgctcggacaagaacactcgcactcgg
gccctttgggtcatctccaagcaggcatttcctcctgaagttgtcagaaaggaggtgtcc
aatattctctgtaccctggaaacaatcctgactaaaggagaagttcagtctgttgtggtt
gaatatgaagcacttaatgtcattatacggctgatggagcaagccccagcccagatggga
gaagaggctgtgaggtgggccaagctgatcatgcccctggttgtccactcagctcacaag
gtgcagttaagaggtgccactgccctggagatggggatgcccctgctcctgcagaagcag
caggaggtggcagctgtcaccgagcacctgatgaccacaaaattaatctccgaactccac
aaattgttttcttccaaaaacgagaccttcgtgttaaagctgtggcccctgtttgtcaga
ttgctcggcaagaccctgcatcgcagcggcagcttcatcaactccctgctgcagctggag
gagctgggcttccgcagcggctcccccgtggtgaagaaaattgccttcattgcatggaag
agcctcattgataactttgctctaaatccagacatcctgtgcagtgctaagaggctgaag
ctgctgatgcagcccctgagctccatccacgtcaggacagaggctctggccctgaccaag
ctggaggtctggtggtatttgctgatgagactggggcctcacctgccctccaactttgag
caggtctgtgtccctctaatccagagtaccctgagtgtggaccctgctgccttcccagga
acgccctcacggcccaacaaccccagcctgggcccagcagcccctgggcagaaaccaggt
cctttgctgttggtgagcccaggtacacccagggtggccctgaacagcccggcaggaggg
cagctcttcccttccatccagctcctggccatggagatgctgctccacttcctcctggga
ccgcaggtcgtggactttgctaagcacaacaagctcgtgcttagtctagagcctctgcag
tccccactgatcagtagcccttcttttttttgtaagcatgccagcactctgataaatgca
gttcaggatggctttcttgccattggaaaagaagttcctgattgtttgctgaacgttatc
tggaaggacatgaatggatatgtaaaaacagcaattgaagcaggaaataagaaggagaag
ggaggctcagaaatcctgaccatgttgctccaggccttaaagaacattgtgagatccaat
gctctgcctgtgcagagagtcctgtctctcattgacatcacagtcaaggagttgccccca
aaagtgctgggatccccagcttaccaggttgctgatatggatcttttaaatggcactcca
gctctgttcctgatccagctgcccttccataacaacctcctggaaagctgtgtggcagat
gagaggttttttgggatcctggaagctctggtgggttttgccctgtctgggcccacctct
gccctggctttcagtgagtctgtgctgtgtgtcattgatcagagtgcagggcaggtgggc
aacaaggagcacctctgcaggatgtggagcattgttgttaatcctctcacagagtggatt
aatcagaataacgaggtgaaccagggggatgccctggaacacaacttcagtgctgtgtac
agtgctttgatgctgccagtatcccacattttcccctctcagggattcccacaggccact
ctgaaatccttgctgcgctcctggtctgacctgtaccgggcttttgctcgctgtgctgct
ctggtggcaacagcagaagaaaacctgtgctgtgaggagctttgtgccaaaataatagct
gggctagaaggtgaaactccagtagtgttctccatgctggaaggtctcacccaccttgtg
tcagtcatggttgactgcatcaactttgcaccctatggcactaaattccagcccaaaaac
agatctccccagacccccacggactgggctaagaagaagaaggagccccttggcaagctg
agctctctgctgaagctgctgctgctgctgctgaactccttccacgagctgagctgcacg
gagcagccggcggagccgctgctggcgctggggctggcgctgctggcggccctgcacggc
ctcgtcagccacatctcactgccctccctgctgggcaccgccctgggcaccttctccaga
gccctggcactgttctatgagaaaaccaggctccctgaggcacccaaagtctacagcaac
ctgagcaacaagctggagaagctgctggcagagatcctgcagtgcctgcagtgccactgc
ccgggctcctgcgactcggagctgctgcggcagctgagccccgtgctgtgcgccgccttc
cagcaccggagcaagcagatccgccagcagagcgcccagctctggaactgcaccttcgcc
aaggcctccgccctcgcctaccccgaggagctcaagtctgtgttaagtcaagccaaaaag
aaaatccctctgctgctgcctggttttgaaagcattgaggtgtctgaggagtgcagcggc
cccttctctgacctgatggagaattcccagctggatgcaaagatcagtggaatggaggtg
aaggtgggacagaaacgagattcaatcttggcacagacaagtgaagccaaaagtgatggc
aaagacaagtccagcaacgggcaagcaacacctgccaagttaaaactagaatttccatct
cctaagacaacaagtgagacgcttctggaagaggagaaatctgttgattttgtgtttatt
cctccagaaacaaaaccaagaatattgacagaacatcagaaggaagtgcttaggtccaag
agggctgacattcctgccatgtacaacaacttggatgcttcccaggacaccagcacgttt
tcccagtacagccagagccaggaggattctttggaaatgccacctgcagtagaaaatgcc
aaagaagaccctgcaaaccaacctcaggaggagaaggtgggcagtgaaggatgtcgctca
gaggagagcccggcctgcaccagcgcggaggagaccaaaaacgagagcgctgagatgatc
ccagaggaaacctccattggagaggccttggagacgagttctgtggaagcagctccccag
gaggcctcagcagggaaggaggacacctcagatgtccccagcagctcagcagggaaggag
gacaccgcagatgtcaccagcagctcagcctccagtgacatcgtctctggcacgccccag
cccgtgagccggcgccagtccttcatcaccctggagaaattcggggctgcagagagccgg
cccttcagcccagcccctctgagctccgtgtcagagctggctgggactcctgctgaggca
gcacaggagagcagcagtgacagcagggctggagctagagcagagaaacctggagaggag
gacaaaaaccctccaaaagccgagggggccgcgcgcaggatgacgcgccggcagagcagg
atggagctgcagggcagcaaacccaaggtgcagggcaggccagaggagcccctggcccct
gagagcctggagagcggtgctgagctgggctctgcagtgcaggacgtggagcacatcctg
ctcagccactcccaggctctgctctccacggaggccgacatccagagagccgaggatgcc
atcgcagaaatggagaaggcccaggggctggacacggactccaaagaaaacaccccccca
gagagcagcagctgccctgagcaggccccaggggaggacagccaggtgccacaggtgtcc
cctcagcagaagcagctgagacgttcctccaggagacgctcggagcctgcggagagctcc
tcgggcagccaggagagggaggatgggctccccaagagagacaggaggaaagaggaggag
aaagctgggcagaagaagctgtcccaggggaaagctgatgggtcccaaaagcagaaagga
attcctgggaaagccgcagagaacacaaaagagagcagccagcctgagagagtggcagag
gagtggagctccaaggactctcctgctctcaggggcctggaggaggagggcagcagaggg
ggcaggagggcagaggatgcccccagggcagagggggaaggtcagggcagcctgagcaca
gcggggcagaaggtggagcgcccacggtaccacaccaggagatcttcccaggggttactg
tccagcatagaaaactctgaggctgacagctctgagggcagggaggagagcaccaagaag
aaaaaacccgtgaaagtgaggagcaggagcaattctcttgaagggaaattgaaagaggga
caggcagggagccagagccctgagggctctgcccagggaagtgaaactaagagtgcacag
gaggccagtaaagctgagcctgaggttggcacaggtgctgcagtgccagctgagccaggt
ggcctggaaaagcaggaaattgctgcagctgctggggaagctgtgggctctggcagctct
gagcacccaggcgctctgcaggacaccagcgtggagccaggcaagggtgatgcacccatg
gagtcactgtgcagcccctgcgtgtctgagcaggatggcagagcagcagaggagaggcac
agcagcacaggggactcctctgtgcaaagccccgagtgccacaacaagagaagcaaaagg
gtgaaaaaaatcaagagctgtgattgctgcttcaaaaagccaaagcagcaggtgactgaa
tcgaagctctctgagtcaaaaaaggagaaaggccctgagctggaggagcctgagatgacc
ccagcacagagcccagctcagagcccagctcagaatgtttctgctccctcagatctggag
gagagcttggccctggctccctgtggaatgagcaccccattgcatcctcccgaggaaccc
agcaccttcagcttggacaggcaggaaatggatgtggaaaacctgcagggaagcagtgtg
ggggtggaggaggagaatccagaggatccagagggttcagcacctgaaatcactgaatcc
atggaggaaatagaggaacctgctgagcagaaggagcccacagaacaggttctgcctgag
agtgttcctgaagagcccagggagagcggcctggactcaggggaccagggggaagaacca
gcagctgcagaagaggaggaaataaaggagaatgggcagctggaggaggagcctgaggag
ctggatgttgacagcaaacctgaggaaaaagagatgaaggggctggaaggaaatcaggag
gataaaggagaagctgagaactctgctggggaaacttgtgttattccagaccaagagatg
aaggaggaattgttggaaactgaaatcaaagtgcctgaaaacgtggccttggcagatcag
agtgtggattcccccctgaaggtggaaggggagcccccagtgcaggtggctgaaagcccc
accagcctccaggcccgctgcacctggtccccctcagcctccccatccaccagcatcctc
aagagaggggtcaagaggagccaggaggatgattccctgtcacctgccaacaagatccgc
cgagtgtcttttgcaaaccccattttccaggagggcctggcagacgacatcgacaggagg
agtcctgtcatcagatcccattcctcaccctcctccaggagtcttaaaatcctctctaac
atgcagcacattaccactccaaccaaaggatttctgtccccaggatctcgtacccttaaa
tttaagagctcaaagaagtgtttaatcacagagatggccaaggagtccctgccgtgcctc
tcggagtttgtgtaccctgccttggctggctgcaaggcccctgtggatgtcattttacct
cagatcacatccaacatctgcgccaggggcctggggcagctcatccgagccaagaacatc
aagaccgtgggagacctgagcactctgacagctctggagatcaaaactctccccatccgc
tcccccaaggtctccaatgtcaaaagagctctgaagggataccacgagcaacaggtgaaa
tctcgagtgttggaggaaagcacagtgcctgaagatgctgagaagcctggaaatgatgtg
gaggagaaatctctgagtggagaagaggaaaaacttgcagcagatctgctggacacaggc
agcagcagcagcagtggtgagcagccccccatggatctgctggggcaggtgcaggccctg
gcagcccagctgagctgccaggatctccgtgcctactctggcaggcagctcctggagatg
caggagaagctgctggccatggcctcgagcatcaccaggagcctgcaggcccagggcccc
gagtag

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