Agelaius tricolor (tricolored blackbird): 139593956
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Entry
139593956 CDS
T10815
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
Spliceosome [BR:
atrc03041
]
Complex A
U1 snRNP components
U1 related factors
139593956 (PRPF40A)
Complex B
139593956 (PRPF40A)
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Paralog
GFIT
Other DBs
NCBI-GeneID:
139593956
NCBI-ProteinID:
XP_071291627
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Position
Unknown
AA seq
1010 aa
AA seq
DB search
MSGGDSTAAAAAASPQPLPFSLPKPPPLMQLTPGDAVRPVGSGADQSPKSARLAARPDWP
AGKPVSLLAPLLPPRGEPEPLLPFGPAAPRPPLRGRLLGRCGGSLLSPAMRPGGVDRGSL
MMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMM
MSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQQSSTSSSSASEEHSKQKS
TWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQT
KESRWAKPKELEDLEAMIKAEENSTKPEDAAAAASAPATAGDAPSGASAAPAAESATAAA
APAGAAPEGESAPAATTGDTDSTGTATAEEQGQAGAAPGTQDGSADAAAAATDEAAKQEA
SGDAAAKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY
SALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQ
MFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCT
TWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQR
KNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTALDLFKFYVEDL
KARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKA
EAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDITLESE
RKRIFKDFLHILEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKKRQRS
ESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKDRERDSEKERA
RQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggggactctacggccgcggccgccgccgcctccccgcaaccgctgccgttc
tcgctgccgaagccgccgcccctcatgcagctgacgccgggcgacgccgtgcggccggtg
ggctcgggcgccgaccaatcgccgaagagcgcgcggctggcggcgcgccccgattggccg
gcggggaagcccgtcagcctgctggcgccgctgctcccgccccgcggggagcccgagccg
ctgctgcccttcgggcccgcggccccgcggccgccgctgcgcgggcgcctcctgggccgc
tgcgggggctccctgctcagccccgccatgcggcccggcggcgtcgaccgcggctctctc
atgatgggccacccgggcatgccccactacccccccatggggatgcaccccatgggccag
agaccccccaacatgcccccagttccccacgggatgatgcctcagatgatgccccccatg
ggaggacccccgatggggcagatgcctggaatgatgcagtcggtgatgcctggaatgatg
atgtcccacatgtcccaggctgccatgcagcccacggttcctccaggagtgaacagcatg
gatgcacaagtaggtgtgacccctcctgggactcagacaacgcatcccgtggtgtccaca
gtccagcagagctccaccagcagcagctctgccagcgaggagcactccaagcagaaatcc
acgtggacggagcacaagtccccggatggaagaacttattactacaacactgagaccaag
cagtccacgtgggagaagccagatgacctcaaaacccctgctgagcaattgctgtccaag
tgtccctggaaggagtataaatcagactctgggaagccttattattacaattcccaaaca
aaggaatcccgctgggcaaaacccaaagagctggaggatcttgaagcaatgattaaagct
gaagaaaacagcacgaagccagaggatgcggctgccgccgcctcggctccggccacggcc
ggggatgccccgagcggggccagcgcggccccggccgccgagagcgccacggctgcggct
gctcctgcaggagctgctcctgagggggaatcggccccggccgccaccacgggggacacg
gacagcactggcactgccacggccgaggagcagggccaggccggcgccgcccccggcacg
caggacgggagcgcggacgctgcggcggccgccacggatgaggcagccaagcaggaggcc
tcgggagatgctgctgcaaagaaggaggatgaggatgcccaaccagttaaaaaaacctac
acgtggaacacaaaggaagaggccaaacaagcatttaaagaactgttaaaagaaaagcgg
gttccatccaatgcttcctgggagcaggccatgaaaatgatcattaatgaccccagatac
agtgctctggcaaaattgagtgaaaagaagcaggcctttaatgcctacaaagttcagaca
gagaaggaggagaaggaagaagccagatccaagtacaaggaagccaaggaatccttccag
cgtttcctggaaaaccatgagaagatgacatccaccaccagatacaaaaaagctgagcag
atgtttggggagatggaagtgtggaacgccatatccgaacgggaccggctggagatctat
gaggatgttctgttcttcctgtccaagaaggagaaggaacaagccaagcagctgcggaag
aggaactgggaagctctgaagaacatcctggataacatggccaacgtcacctactgcacc
acctggtcagaggcccagcagtacctcatggacaaccccacctttgctgaggatgaggag
ctccagaacatggataaggaggatgccctgatctgttttgaggaacatatcagggccttg
gagaaagaggaggaggaggagaagcagaaaagtttgctgagggaaaggaggaggcagcgt
aaaaacagggagtctttccagctgttcctggatgagctgcacgagcacgggcagttgcac
tccatgtcctcctggatggaattgtacccagccatcagctccgacatcagattcaccagc
atgctcggccagcctggatcaacagcactcgacctgttcaagttttacgtggaggatttg
aaagctcgttaccacgatgagaagaagataattaaagacatcctaaaggataaaggattt
gtggtggaggtgaacacttcctttgaggattttgtcactgtcatcagctccactaaaaga
gccaccaccttggatgcagggaatatcaagctggctttcaacagtctgctggagaaggcg
gaggcgcgggaacgggagcgggagaaggaggaggcccggaagatgaagcggaaggaatcg
gccttcaagagcatgctgaaacaagccacccctcccatcgagctggatgctgtctgggag
gatatcagagacagatttgtgaaggaaccagcatttgaagacatcaccctggaatctgaa
aggaaaaggatatttaaggatttccttcatatacttgagcacgagtgtcagcaccaccac
tccaagaccaagaaacattcgaagaaatccaaaaaacaccaccggaagcgctcgcgttcc
cgctccggctcagagtccgaggatgacgacagccactccaagaagaagcggcagcgctcg
gaatcgcggtcggtgtccgagcgttcttccagcgccgagtccgagaggagctacaagaag
tccaaaaaacacaagaagaagagcaagaagaggaggcacaagtctgattcaccagaatct
gatgtggaacgagagaaggacaagaaggatagagagagggacagtgagaaggaaagagcc
agacagagatctgagtccaagcataaatctcccactaagaaacggcctggaaaagattcc
ggaaactgggatacctctggcagcgagctcagcgagggggagctggaaaagcagaggagg
actcttttggaacagctggatgaagatcagtga
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