Agelaius tricolor (tricolored blackbird): 139594001
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Entry
139594001 CDS
T10815
Symbol
PATJ
Name
(RefSeq) inaD-like protein
KO
K06092
InaD-like protein
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139594001 (PATJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
DUF6604
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
139594001
NCBI-ProteinID:
XP_071291700
LinkDB
All DBs
Position
Unknown
AA seq
1867 aa
AA seq
DB search
MPAVSAAGHPGPPSSPHPELPAPRPQCGADKQQVLQILDRLQAKLQEKRDSQHQENLAVL
RNTLRSPLFNQILTLQQSIKQLKEQLNYMPPDRSVDFDFTKRGLLVFADKSVTAGTPCTS
PAPRASAFTPNLAVNEFNMIIQQMAKGRQIESITIDKPSVGGLGFSVVALKNPSLGEVGI
FVKEVQPGSIADRDQRLRENDHILAINCTPLDQNISHQHAIALLQQSTGSLHLVVAREPL
QGNSRTALFSDVNPPETIHWGHVEDVELINDGSGLGFGIVGGKSSGVVVRTIVPGGLADR
DGRLQTGDHILQIGGTNVQGMTSEQVAQVLRNCGNSVRMIVARDPKCEFMEAPPAPLSWP
VSTLPSLPNGNDNDNFFDTYDVELIKKNGQSLGITIVGYAGTCDIEPSGIFVKSIIPGSA
ADHNGQIHVHDKIVAVDGVNIQGFTNQEVVETLRNTGQTVRLTLLRRRPSFAISSETPSG
RGRVPLPPAHELKSKWENLLGPEYEVMVVNVDMPFKDDSELQKYSKLLPIHTLRLGVELD
TFDGHHYISSIASDGPAAALGLLQLEDELLEVNGVQLCGRSRREAVTFLKEVPPPFTLVC
CRRLFSDGTESWVDEPPVAAVSPPEQQVKPEEDFNPEEEEGELALWSPDVKVIELEKDKN
GLGFSILDYQDPLDPAGTAIVISSLVPGGVAERGGQILPGDRLVFVNEKHLDGATLAEAV
EVLKSVPPGTVSLGICKPLVGDSREEEKTHGVDTSSIKSSPGSPEPVDNTNFSVILEAPQ
GFRDEVPFKEELVDEPHLDLGRSFQLSQKDEEYGKESWEMCEFLKVRAEDVEEEREMLVD
EEYEEDSDFLKGDDASGGEEAASDRNLDTERWAEQLEDAEIQDLRSSVSLNAKESLEYPF
RKDQMCEENAALRSHISGTTAPSSYQKDLFDTETTQAEVKTEMNLGPKLQSDSKGPELAA
DSEAAGKEALKEENYVLPKSRESGRVTTLAQPRAASGSELPEREEGEGEETPNFSHWGPP
RIVEIFRDPEVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGRTRALKTGDKIL
EVSGVDLQNATHKEAVDAIKNAGNPVVFVVQSLANVPKVVSPAQPKGIKVSKDQDADKEN
KSDKRKYGAPPPMKLPPPYRALERHHAGEAALGEEEDEDACAEEKIRQRYADLPGELHII
ELEKDKNGLGLSLAGNKDRSRMSIFVVGINPDGPAGRDGRMHIGDELLEINNQILYGRSH
QNASAIIKTAPSKVKLVFIRSEDAVNQMAVTPFPLPSGSHSAIEDHSGTEPAGGEEDPSL
EVVMKSLTDEESNKADVKCKSDPPAVADEQEAEEQLPENVLSQIKQPKPSTAAPGSCQEL
PLEPAPPHLPPEPEATSRGVFPPPLPVDPATCAIVPGQEMTIEISKGRSGLGLSIVGGKD
TPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGIDLRSASHEEAITALRQTPQKVQLVV
YRNEAHYKDEENLEIFSVDIQKKTGRGLGLSIAGKRNGSGVFISDIVKGGAADLDGRLIQ
GDQILSVNGEDMRNASQETVATILKCAQGLVHLELGRLRAGSWLSSRKTSQNSQASQQSV
HSHFHPALAPVLSTLQNFVGTKRSSADTSQRSSGGADMGPRTVEITRGPYDALGVSIAGG
KGSPLGDIPIFIAMIQASGVAARTQRLRVGDRIVSINGQPLDGLSHADAVNLLKNAYGSI
ILQVVADTNISAIASQLESMSTGCSLSLPSEHPSEDPEAPQPKIITLEKGSDGLGFSIVG
GYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQIVAVNGEALEGVTHDQAVAILKRQKGT
VTLTVLS
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgtgagcgccgccggccatcccggccccccgagctccccgcaccccgagctc
cccgcgccccgcccgcagtgtggtgcagataagcagcaggtgctgcagatcctggaccgg
ctgcaggcgaagctgcaggagaaaagggattcccagcaccaggaaaacctggctgtccta
aggaacaccctcaggagccccctgttcaaccagatcctgactctccagcaatccatcaag
cagctgaaggagcaactcaattacatgcctcccgaccgctcggtggattttgattttacc
aagagggggctgttggtgtttgctgacaaatcagtcactgctgggacaccttgcacttca
cctgcacccagagcatcagccttcactccaaacctggcagttaatgaatttaacatgatc
atccagcaaatggcaaagggaagacaaatagaatcaataacgattgataaaccttctgtt
ggagggcttggattcagtgtggttgcccttaaaaatcccagcctgggagaagttggtatc
tttgtcaaggaagtccagccaggaagcatagctgacagggatcaaagactgagggaaaat
gaccacatactggccattaattgcacgccattggatcagaacatttcccatcagcacgcc
attgccctcctccagcaatccacaggatccctgcatctggtggtggctcgggagccactt
caagggaacagcagaactgccttgttcagtgatgtaaatccacctgagactattcactgg
ggccacgtcgaagacgttgagctgattaacgatggttcaggattaggctttggaattgta
ggaggaaagtcgagtggagtagttgtaagaacaattgttcctgggggattagcagatcgg
gacgggaggctgcagacgggagaccacatcttgcagattggagggaccaacgtgcagggc
atgaccagtgagcaggttgcccaagtgctcaggaactgtgggaattctgtcaggatgatc
gtggcaagggaccccaagtgtgaattcatggaggctccaccggctcccctgagctggcca
gtcagcacattgccttcccttccaaatggaaatgacaatgacaacttttttgacacctat
gatgttgaacttataaaaaagaatgggcaaagcctgggaataacaattgttggatatgct
ggcacatgtgatatagaaccttcagggatttttgtgaaaagtataatacctgggagtgct
gctgaccacaatggccaaattcatgttcatgacaaaattgttgctgttgatggagtcaac
atacagggttttaccaaccaagaagtggtggagacactgcggaacacgggtcagactgta
cgtctcaccctgcttaggaggagaccttcctttgctatttcctcagaaacaccttcaggg
agaggaagagtcccactccctccagcacatgagctgaaatccaaatgggaaaacctgctg
ggaccagaatacgaagttatggttgtgaatgtggatatgccctttaaagacgattcagag
ctccagaagtactcaaagctgttacccatccacactctgagattaggagttgagctggac
acttttgatggacaccattatatctcatccattgcttcagatggcccagctgcagcactt
ggccttctgcaactggaggatgaacttctggaggtaaacggggtgcagctgtgtggcagg
tcccggcgtgaggctgtcaccttcctcaaggaggtgccaccgcccttcaccctggtgtgc
tgccggcggctcttcagcgacggcaccgagtcctgggtggacgagccccccgtggcagca
gtgtcccctccagagcagcaggtgaaacccgaggaagactttaatcctgaggaggaagaa
ggggaattggcattatggtctcctgatgtgaaggttattgagctggagaaggacaaaaat
ggtttaggattcagcattttggactatcaggaccccttggatccagcaggaacagccata
gtgatcagctccctggtgcctggtggcgtggccgagcgcggggggcagattttgccgggc
gatcgcctggtgttcgtcaacgagaaacacctggatggtgccaccttggcagaggcagtg
gaagtgctgaaatctgtgcccccagggacagtttcccttgggatctgcaagcctttagtg
ggagacagcagagaggaggagaaaacgcacggtgtggataccagcagcatcaaaagcagc
cctgggtctccagaaccagtagataacacaaatttctcagtaatacttgaagcaccacag
ggtttcagggatgaggtgcctttcaaagaagaactcgttgatgagccccatttggacttg
ggaaggtcatttcagctttctcagaaggatgaggagtatgggaaggagtcctgggagatg
tgtgagtttctgaaagtcagagcagaggacgtggaggaggaacgggaaatgttggtggat
gaggaatatgaggaggattcagacttcctgaagggggatgatgcatcaggtggagaggag
gcagcttcagacaggaacctggacacagaacgatgggcagagcaactggaggatgctgaa
atacaagatttaagatccagtgttagcctaaatgccaaagagtccctggaatatccattc
aggaaagatcaaatgtgtgaagagaatgctgctttaaggtcacacatttctggaaccaca
gctcccagcagctaccaaaaagacctatttgatactgaaactacccaggcagaagtgaaa
actgagatgaatttagggccaaagcttcagagtgactccaaaggacctgagcttgctgct
gattcggaagcagctggaaaggaagccctgaaagaggagaattatgttcttcccaagagc
cgggaatctgggagagtaaccaccttagctcagcctagagcagcatcaggcagtgaatta
cccgagagagaagaaggagaaggagaagaaactccaaacttcagccactggggaccacca
cggattgttgagatcttcagagaccctgaggtgtctcttggaatcagcattgttggtgga
caaactgtcataaagcgcctgaagaatggagaagaacttaaagggatctttatcaaacaa
gttctggaagacagcccagcaggaagaacaagggctttaaaaactggagataaaatactt
gaggtttctggggtagacctacaaaatgccacccacaaggaagcagtagatgccatcaag
aatgcaggaaatcctgtggtgtttgtagtccagagcttggctaatgtaccaaaagtggtt
tctcctgcccagcctaagggaatcaaagtcagcaaagatcaggatgcagacaaagaaaat
aagagtgataagaggaaatatggggctccacctcccatgaagctgccacctccttacaga
gccctcgaaaggcaccacgcaggggaggctgctctgggtgaagaggaggatgaggatgct
tgtgcagaggaaaaaatcaggcagagatatgcagatctcccgggagaattgcacattatt
gagctggagaaagacaagaatgggctggggctcagcctggctggcaacaaggaccgctcc
aggatgagcatcttcgtggttgggatcaatcccgacggccccgcgggacgggacgggcgc
atgcacatcggggacgagctcctggagataaacaatcagatattgtatggaagaagccac
cagaatgcttctgcaatcattaaaactgccccatccaaggtcaagctggttttcatacga
agtgaagatgcagtcaaccagatggctgtcactcccttcccactgccttcaggctcccac
tctgccattgaggaccactctggcactgaacctgcaggtggtgaggaagacccaagtttg
gaagttgtcatgaaaagcttgactgatgaggaatccaacaaagctgatgtgaagtgtaaa
tctgacccaccagcggtggcagatgagcaggaggcagaggagcagctcccagaaaatgtc
ctcagccagatcaaacagcccaaaccttccacggcagccccagggagctgccaggagctg
cccctggagccagcacctcctcaccttcctccggagccagaagccaccagccgtggtgtg
ttcccacctccactgcctgtggatccagccacctgtgccatagttccagggcaggagatg
accatagagatctccaagggtcgctcaggcctcgggctcagcatcgtcgggggcaaggac
actcccctggatgccatagtgatccatgaagtttatgaagaaggggcagcagcccgagat
ggcagactgtgggctggtgatcagattctagaggtgaacgggatcgatctgcgcagcgcc
agccacgaggaagccatcactgccctccggcagacaccccagaaggtgcagctggtggtt
tacaggaatgaggcacactacaaggatgaggaaaacttggagatcttctctgtggacatc
caaaagaaaacgggcagagggctggggctcagcatagctgggaaacgaaatggaagtgga
gtgtttatctctgacattgttaaaggaggagctgcagacctagatggaagattaattcaa
ggagatcagattttgtctgtaaatggggaggatatgagaaatgcctcacaagagactgtt
gccactatacttaagtgtgcccaaggcctggtgcatcttgagcttgggagattgcgagct
gggtcatggctgtcatcacggaaaacatcccaaaacagtcaggcgagccagcagagtgtc
cacagccacttccaccccgcgctcgcccccgtcctctccaccctgcagaactttgttggc
accaagagatcctcagcagacacatcccagagaagctcaggaggcgccgatatgggcccg
aggactgtggagataacaaggggcccatatgatgccctgggtgtcagcatagcaggaggg
aagggcagtcccctgggagacatccccatcttcatcgccatgatccaggccagcggagtg
gctgctcgcacacagaggctcagagttggagatcggattgtcagcattaatgggcaacct
ttggatgggctgtctcatgcagatgcagttaatctactaaagaatgcttatgggagcatt
atcctgcaggtggtggctgacaccaacatcagtgccattgccagccagctggagagcatg
tccacgggctgcagcctcagcctgccctctgagcatccctccgaggatcctgaagcacct
cagcctaagattattactttggagaaaggctctgatggactgggatttagtattgtaggg
gggtatggaagtccccatggagacctgcccatttatgtcaagactatttttgccaagggc
gcggcggccgacgacgggcggctgaagcgcggggaccagatcgtggccgtcaacggggag
gccctggaaggcgtcacccacgaccaggccgtggccatcctgaagcgccagaaggggaca
gtgaccctgacagtgctgtcctga
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integrated database retrieval system
