Agelaius tricolor (tricolored blackbird): 139594277
Help
Entry
139594277 CDS
T10815
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139594277 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139594277 (VCAM1)
04090 CD molecules [BR:
atrc04090
]
139594277 (VCAM1)
04091 Lectins [BR:
atrc04091
]
139594277 (VCAM1)
Cell adhesion molecules [BR:
atrc04515
]
Immunoglobulin superfamily
VCAM
139594277 (VCAM1)
CD molecules [BR:
atrc04090
]
Proteins
139594277 (VCAM1)
Lectins [BR:
atrc04091
]
I-type lectins (Siglecs)
139594277 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C2-set
Ig_4
Ig_C17orf99
V-set_CD47
C2-set_3
ICAM1_3_5_D2
C1-set
Motif
Other DBs
NCBI-GeneID:
139594277
NCBI-ProteinID:
XP_071292247
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MRRNRKIKVEKAAELMCVFPFVVKGFEMEIIPAERIVAQIGGTLILTCNTTGCASPRFSW
RTQMDSPLGGKVSNHRTYSTLTMNPVGIVNSHSYLCTVICGERGKKEKSVKVELYSFPSD
PVIEISQSLVAGEPAPVICRIPDVYPSHHLEVLLKKDEHVLHKEDFSDDDSTNTETKIVT
YTFHPMAEDAGKEVTCVARLPIADMDFEPKERTSSQKLKVNFGPQNTAITVSPGNSPMEG
DSLNLTCVTQSNPPAQIVWHKHLAEESIQHLIKNNVLFIPRVHFNDSGRYSCEVINLVTN
KTEEATVDIIIQGAPVITKLSIEPSTTVQEGQNVSIQCSAESNPPPKIILRRKSDNADIG
TSSARSILLPSVMFQNGGDYECVAENKYGNSKSEITLNVKYGPKNTMITVFPAALKEGET
VTMKCTSSGNPAPVISWKKKKATGESEKISKNATITIQNLKSQDLGLYECEAYNQFGKEE
KAVELYVQARLEEPDQMIPFIIAFSSVAAVAVPAVAILIYVSRQAKINGSYSLVKALRLK
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaacaggaaaataaaagttgagaaagctgctgaattgatgtgtgttttccct
tttgtagttaaaggttttgaaatggaaattatacctgctgagagaattgtggcacagatt
ggaggcacactcatactcacatgcaatactactggctgtgcatcaccacgtttttcctgg
agaacccagatggacagcccccttggaggaaaagtcagcaaccacaggacatattctaca
ttgactatgaatccagttggcattgtgaattctcattcttatctttgtactgtcatatgt
ggtgagagagggaaaaaggagaagagtgtcaaagttgaactttactctttccccagtgat
cctgtcattgagatcagccaatccttagttgctggagaaccagcccctgtcatctgtaga
attcctgatgtgtacccttctcatcacctggaagttctcctaaagaaagatgaacatgtt
cttcataaggaagatttttcagatgatgacagcacaaatacagagaccaaaattgtgaca
tatacatttcatcccatggctgaagatgctgggaaagaggttacctgtgtggccaggtta
ccaattgctgatatggattttgaacccaaagaaagaacatcttctcagaaacttaaagta
aattttggtccacaaaatactgccattactgtatctccaggcaactccccaatggaagga
gattctctgaacctcacttgtgtgactcagagtaacccaccagcacaaatagtttggcat
aaacatttggctgaagaaagcattcagcatctgataaaaaacaatgttctttttattccc
cgtgtccatttcaatgattcaggacggtacagctgtgaagtaatcaatctggtaactaat
aaaacagaagaagcaactgtggacattattatacaaggtgctccagtcattacaaaactc
tccattgaaccttctacaacagttcaggaaggacaaaatgtctccatacaatgttctgct
gaaagcaaccctcctcccaagataattttaaggagaaaatctgacaatgcagacataggg
acttctagtgccaggagtattcttcttccatctgtgatgttccaaaatggaggagactat
gaatgtgtagcagaaaataagtatgggaacagtaaaagtgaaatcacacttaatgtgaaa
tatggaccaaagaatacaatgatcactgttttccctgctgctcttaaagaaggggaaact
gtgacaatgaaatgtactagttctggtaatccagctcctgtgatctcctggaagaaaaag
aaggccaccggggagtctgagaaaatttctaaaaatgcaactataactatacagaacttg
aaaagtcaagatctggggctttatgaatgtgaagcttataatcaatttggcaaggaagaa
aaagctgtggaattatatgttcaagcaagattggaagaaccagatcagatgatcccattc
attattgcattctcatctgtagcagcagtagcagtacctgcagttgcaattttgatctat
gtgtcaagacaagcaaagatcaatggatcctacagtcttgtaaaagcactcaggttgaaa
gtttga
DBGET
integrated database retrieval system
