Agelaius tricolor (tricolored blackbird): 139594291
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Entry
139594291 CDS
T10815
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139594291 (HBS1L)
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Other DBs
NCBI-GeneID:
139594291
NCBI-ProteinID:
XP_071292282
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Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLDEEYG
YEGTDAAADCFTPTHQLTEVDRARLNSCLDQMREVLAESIPEQTMVQAVLDAKFDVQKAL
DLVLSQGSKQNVKTKNKDAVILAKTTKGKTRDSQSARMESEIVPKIAKMTVSGKKQSMGF
EVPCAIAEENGHTNTPQKGLLPEDASVASGVLEAVSKSTPSPQVVQVSEEQNMVPTPGKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKG
FPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggatataactacgacgaagactttgaagatgatgat
gtgtatggccaatcagtagaagatgattattgcatttctccttcaacagcagctcagttt
atttactccagacgagacaaaccagccacatttgctgagccattagatgaagaatatggc
tatgaaggtactgatgctgctgctgattgttttacacccactcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccata
ccagaacaaacaatggtgcaagcagtactggatgctaaatttgatgtacaaaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataaggatgctgtg
attttagcaaagactacaaaaggaaaaacaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaaattgccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgcgattgctgaggaaaatggccacactaatacacctcagaaaggactg
ttacctgaagatgccagtgtagcttctggagtgcttgaggctgtctcaaaatctacgcct
tcaccccaagtagtgcaggtttcagaagagcagaatatggtgcctactccaggaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcagctgctgaatttggtggtaataggacatgttgatgcaggcaaaagtactttaatg
ggtcatttgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gaatctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaatttgagacaccaact
aaagtaattacactgatggatgctccaggccacaaggacttcattccaaatatgatcaca
ggagctgcacaggctgatgtggcaattttggttgtggatgccagcagaggagagtttgag
gcagggtttgagacgggtggacaaactcgagaacatggattattagtgcgctctcttgga
gtgacacagttggctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaaga
tttcaggaaattacaagtaagcttggccaatttcttaagcaagctggctttaaggaatca
gatgtggcttatatcccaacaagtggccttggtggagaaaatctagtcacaaggggtcag
tcaagtgacctcacacaatggtataaaggaaagtgtttgttggagcaaattgattctttc
aagccaccacagagatcagtggataaaccatttagactgtgtgttgctgatgtttttaaa
gaccaaggttcaggattttgtgtgactggtaaaatagaagcaggctatattcaggttgga
gaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcac
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcggttcagagctcgggttctcatcttcaatattgaggttccaatcactaaagga
tttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaagactgttg
agtgtcctgcacaaaagtactggtgaagtgacaaagaaaaaacctaagttcttggctaaa
ggccagaatgctctaatagaactacagactcaaagacctgttgctctagagttgtacaaa
gattttaaagagctggggaggtttatgttacgctacagtggttccactattgctgcagga
gttgttacagagattaaagaatga
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