Agelaius tricolor (tricolored blackbird): 139594355
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Entry
139594355 CDS
T10815
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139594355 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139594355 (GTF2B)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
139594355 (GTF2B)
Prokaryotic type
Archaeal type
TFB
139594355 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
139594355
NCBI-ProteinID:
XP_071292440
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MASTSRLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagccgtttggatgtgcttccaagggtgacttgcccaaatcatccagat
tccattttagtggaggattacagagctggtgatatgatttgttctgagtgtgggctagta
gtaggtgaccgggtcatagacgtgggctcagagtggagaacgttcagcaatgacaaagca
accaaagacccatctcgagttggggacacccagaatcctttgctcagtgatggtgacttg
agtacaatgattggcaagggcacaggtgcagcaagttttgatgaatttgggaattcaaag
taccaaaatcgcagaactatgagcagctctgatcgtgcaatgatgaatgcttttaaagaa
attacgaacatggcagacagaatcaacctccctagaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgagcaaaagagcctgaaggggagaagtaatgatgctattgct
tctgcttgtctctacatagcctgtaggcaagagggtgttccaagaacatttaaagaaata
tgtgcagtgtccaggatttcaaagaaagaaataggccggtgttttaaacttattttgaaa
gctctggaaaccagcgttgatttgattacaactggagacttcatgtcacgattctgttct
aatctgggtcttcccaaacaagtacaaatggcagcaacccatattgcccggaaagctgtg
gaattagatttggttcctgggagaagccctatctctgtagcagctgcagctatttacatg
gcatcacaggcttcttcagagaaaaggacgcaaaaagaaattggtgatattgctggtgtg
gctgatgttacgattagacagtcatacaggctgatctatcctcgagctccagatcttttc
ccagcagacttcaagtttgataccccagtagacaaactaccacagctgtga
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