Agelaius tricolor (tricolored blackbird): 139594932
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Entry
139594932 CDS
T10815
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139594932 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139594932 (U2SURP)
Spliceosome [BR:
atrc03041
]
Complex A
U2 snRNP components
U2 related factors
139594932 (U2SURP)
Complex B
139594932 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
139594932
NCBI-ProteinID:
XP_071293735
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MADKAPGGSQKPAGKVRGPDAVHTTGSADSHNVIKEKPLMESKLKAFSIGKMSAAKRTLS
KKEQEELKKKEDEKAAAEIYEEFLAAFEGGDGNKVKTFVRGGIVNASKEEHETDEKRGKI
YKPSSRFSDQKNQPSQPSNEKPPSLLMIETKKPTLPKNKNKQTTLPGPLKKGEKEKKKSN
LELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAP
GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV
AFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPF
NAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGP
MFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFW
RPPPLNPYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFC
LNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKL
CQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIME
DKETEEVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDT
AEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIQNQEEESEDE
EDTQSSKSEEQHMYSNPIKEEMPDSKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGK
RPKKPGQSFQEQVEHYRDKLLQREKEKEMERERDRDKKDKEKSDTRSKDKKEKEECTPTR
KERKRRHSASPSPSRSSGSRRAKSPSPKSERSERSHKESSRSRSSHKDSPRDASKKGKRS
PSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggcgcccggcggctcgcagaaacccgccgggaaggtcagagggccagat
gcagtacataccactggatctgctgattcacataatgtgataaaggaaaagcctctaatg
gaaagtaaacttaaagcattcagtattggcaaaatgagtgctgccaaacggacactgagt
aagaaggagcaagaagaattaaaaaagaaggaggatgagaaggctgctgcagaaatttat
gaagaattccttgctgcctttgaaggaggtgatggtaataaagtgaaaacatttgtaaga
ggaggaatcgttaatgcatctaaagaggagcatgaaacagatgaaaaacggggtaaaatc
tataaaccttcatcacgattctcagatcaaaaaaaccaaccaagtcagccatctaatgag
aaacctccatccctcctaatgatagaaaccaaaaagcctaccctccccaaaaacaaaaac
aaacaaacaactttgcctgggcctttgaagaaaggagagaaggaaaagaaaaagagtaat
ttggaactttttaaagaagaattaaagcaaatccaagaggagcgtgatgaaaggcacaaa
acaaaaggtagattgagtcgttttgaaccaccccagtctgattcagatgggcagcggcgt
tcaatggatgctccttcaagaagaaacagatcatctggtgtactggatgattatgcacca
gggtcacatgatgttggagatccaagcacaacaaacttgtatctgggaaacatcaatcct
cagatgaatgaagagatgttatgtcaagaatttggccgctttggaccattagcgagtgtt
aaaattatgtggccaagaactgatgaagaaagagcaagagaaagaaattgtggctttgtt
gcctttatgaacagaagagatgctgaaagagcattgaagaatttaaatggcaagatgata
atgtcgtttgaaatgaagctgggctggggcaaagctgttcctatcccaccacatcccatc
tacattccgccctccatgatggagcacaccctgccgccacccccgtcaggactgcctttc
aatgcccagcccagggagaggttgaagaatcccaatgctccaatgttaccaccaccaaaa
aacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctcgctttgatacatcgaatgatagagtttgtggttcgggaagggccc
atgttcgaagccatgatcatgaaccgagaaatcaacaaccccatgttcaggtttttattt
gaaaaccagactccagcccatgtgtattatagatggaagctttattcaattcttcagggg
gatgctccaaccaagtggaggacagaagatttccgcatgttcaaaaatggatccttctgg
aggccaccaccattgaatccatacctgcatgggatgtcagaagagcaagaaacagaagca
tttgtggaggaaccaaacaagaagggtgcacttaaggaagaacagagggacaaactagag
gaaatcctgcgtgggttaacacctcggaagaatgacattggtgatgcaatggtcttctgt
ctaaataatgcagaagctgctgaagaaattgtggattgcattacagagtcattgtccatc
ctcaagactcctcttcctaagaagatcgcaagattgtatctagtgtcggatgtgttgtac
aactcttcagctaaagttgccaatgcttcctactatagaaaattttttgaaacaaaatta
tgtcagatattctctgatctcaatgctacttaccgtacaatacaaggccatttacagtct
gaaaatttcaagcaacgggtgatgacatgcttccgagcatgggaagactgggcaatctat
ccagaaccatttctgatcaaactacagaatattttcttggggcttgtaaatatcatggaa
gataaagaaacagaggaagtaccagatgatctcgatggtgctcccattgaggaagagctc
gatggtgctccactagaagatgtggatggaattcctattgatgctgctcctattgatgat
ctagatggagtcccaattaaatctctggatgatgatcttgatggagttcctttggataca
gctgaagactcaaaaaagaatgagcctatatttaaagttgccccttcaaagtgggaagca
gtggatgaatcagaactggaagctcaagctgttactacttctaagtgggagctttttgac
caacatgaagaatctgaggaggaggaaattcaaaatcaagaagaagaaagtgaagatgaa
gaagacacacagagttctaagtcagaagaacaacacatgtattcaaaccctattaaagag
gaaatgcctgactccaagtcatcagtcaaatactcggaaatgagtgaggaaaagcgtgcc
aaactccgagagatagagcttaaggtgatgaagtttcaggatgagttagagtctgggaaa
agacccaagaagccaggccagagttttcaggaacaggttgaacactatagagacaagctg
ctccagagggaaaaagaaaaagagatggaaagagaacgggacagagacaaaaaggacaag
gaaaagtctgataccaggtccaaagataagaaggaaaaagaggaatgtacaccaacacga
aaagagaggaagaggcggcacagcgcctcccccagcccgtcccgcagcagcggcagccgc
cgcgccaagtcaccctcgcccaaatccgagcgctccgagcgctcccacaaggagagctcc
cgctcccgctcctcgcacaaagactctcccagagatgccagtaaaaaaggcaaaaggtcg
ccatctggctccaggacacccaaaagatcaagaagatcacgatccagatcccctaaaaag
tcagggaaaaaatccaggtctcagtcccgttctcctcacagatctcacaagaagtcaaag
aaaagcaaacactga
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