Agelaius tricolor (tricolored blackbird): 139595168
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Entry
139595168 CDS
T10815
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139595168 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139595168 (DHX36)
03012 Translation factors [BR:
atrc03012
]
139595168 (DHX36)
Enzymes [BR:
atrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139595168 (DHX36)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139595168 (DHX36)
Translation factors [BR:
atrc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
139595168 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
Sir1
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
139595168
NCBI-ProteinID:
XP_071294315
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MSYEQRRDWGRGRGRGRGRGGDGGAAAAAAAASSAAGGPGGRGRHPGHLKGREIGMWYAR
RQGQKNRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQP
AKVKPDAEKAPVRQTPTWEKTSLDLDVEFLCEKTEQDADLDEQLKEDLMKKRSDPRYIEM
QRFREKLPSYGMREELVKLINSNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIV
CTQPRRISAISVAERVAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQ
SDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDH
CPMIHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRLHWRRGFMQGHMSRPEKEEKEEIYR
QQWPGYLRQLQGRYSASTISALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDN
ISTLHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITI
DDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRA
SLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPSRDAVMLAINHLMELNAL
DRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI
ADARRKELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQ
FAEHLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVC
TKTDGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQ
KDKDQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIESPRPVDWNDIKSRDTAVL
TAIIDLITTQENEGVRNFAPRFQGERYS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgtgactggggccgcggtcgcggccggggccggggccggggc
ggcgatggcggcgctgccgctgccgccgccgcagcctcctccgcggcgggcgggcccggc
gggcgaggacggcaccccggccacctgaagggccgcgagatcgggatgtggtacgcccgc
aggcagggccagaagaaccgggacgccgaccggcagcagagagctgtggtgcgcatggat
gagcgccgggaagagcagatcgtgcagctgctgaattctgtccagactaaaaatgacaaa
gagcaagaagccatgtcctggtggtccggggatgaagaaggccctgctccagaacagcct
gccaaagtgaaaccagatgctgagaaagctcctgtaagacagacaccaacctgggaaaaa
acatccctggatttggatgtggaattcctctgtgaaaaaaccgagcaggatgctgattta
gatgagcaacttaaagaagacttaatgaagaagagatctgatcccagatacattgaaatg
cagagattccgagagaagctcccctcatacgggatgagagaggagctggtgaagctgatc
aacagcaaccgcgtgacggtgatcagcggcgagacgggctgcggcaagaccacgcaggtg
acacagttcatcctggacgaccacatcgagcggggcctgggctccacctgcaggatcgtg
tgcacgcagccccgcaggatcagcgccatctccgtggctgagagagtggctgctgagagg
gcagagagctgtggcaatggcaggagcacggggtaccagatccgcctgcagagtcgcttg
ccaaggaaacaaggttcaattttgtactgtaccacgggaattgtcctgcagtggctccag
tcagataagcacttgtccagcatcagtcatgtagttcttgatgaaatccatgaaagaaat
cttcaatcagatgttttaatgagcattattaaagatcttctgaatgttcggctggatctg
aaagtcatactgatgagtgctactttaaatgcagagaagttttccgagtactttgaccat
tgccctatgattcacatccctgggttcactttcccagtggtggaatatctgcttgaagat
gtcattgagaagttgaggtacaccccggagaagacagaccgccggctgcactggaggagg
ggcttcatgcagggccacatgagcaggccagagaaggaggagaaggaggagatctacagg
cagcagtggccaggctacctgaggcagctgcagggcaggtattcagcaagcacaatcagt
gccctggaaatgatggatgatgacaaggtggacctggaccttatagctgcactgatcaga
cacattgtgctggaagaggaggatggtgcaattctggtgtttctgccaggctgggataac
atcagcactttgcatgagctcttgatgtctcaagtcatgtttaagtcagataggtttatt
atcatccctttgcattcactgatgcctactgttaaccagactcaggtgttcaagaagacg
ccgccaggagtgaggaaaattgtgattgcaaccaacattgcagaaacaagcatcacaatt
gatgacgtcgtgttcgttatagatggggggaagataaaggagactcactttgacacccag
aacaacatcagcaccatggcagcagagtgggtcagcaaagccaacgccaagcagaggaag
ggtcgagcaggaagggttcagccaggccactgttaccatctgtacaatggactgcgtgcc
agcctgctggatgattatcagttaccagagatcctgaggacccccttggaagagctctgc
ttacaaatcaagatcctgaggcttggtggaattgcctattttctgagcaaactgatggac
cccccctctcgtgatgctgtgatgttggccatcaatcacctcatggagctgaatgctctg
gacaggcaggaggagctgactcccctgggtgtgcacctggcacggctgcccgtggagcct
cacattgggaagatgatcctgtttggagccttgttctgctgcctggaccccgtgctgacc
attgcagccagcctcagcttcaaggacccgtttgtcatccctctgggcaaagagaaaatc
gcagatgcaagaagaaaggagctgtcaaagaactcaaaaagcgaccatctgactgtggtg
aatgccttcactggctgggaagaggctcggagttgtggtttcaggaatgagaaggattat
tgctgggaatatttcctgtcctcaaacaccatgcagatgctgcataacatgaaagggcag
tttgctgagcatctccttgcagctgggtttgtgaatagtagaaaccccaaggatcccaaa
tctaacaccaactcaggtaatgagaagctgctcaaagcagtcatctgtgctggcctctat
cccaaagtggcaaagatccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgc
accaagacagatggatcagttaatatccaccccaaatcagtgaatgtggaggagacagag
ttccattataactggctggtgtaccatttgaagatgaggaccagcagcatttacctgtat
gattgtacagaggtgtctccatactgcctcttgttctttggaggggatatatccattcag
aaggataaggaccaggacaccatcgctgtggatgagtggattgttttccagtctccagaa
aaaatagcaaacttggtcaagaaattgagaaaagaactcgatgatcttctacaagagaaa
atagaaagcccccgtcccgtggactggaatgacataaaaagcagggacacagccgtgctg
acagcaattatagacttgatcaccacgcaggagaacgagggcgtgcggaacttcgcgccg
cgcttccagggcgagcgctacagctga
DBGET
integrated database retrieval system
