Agelaius tricolor (tricolored blackbird): 139595361
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Entry
139595361 CDS
T10815
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Glycosaminoglycan binding proteins [BR:
atrc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139595361 (COL13A1)
BRITE hierarchy
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Other DBs
NCBI-GeneID:
139595361
NCBI-ProteinID:
XP_071294533
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Position
Unknown
AA seq
652 aa
AA seq
DB search
MGIPGRPGLKGQSGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQK
GEMGAAGPRGQPGPPGQKGEKGQCAEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGI
QGPPGPPGPPGPPGPAGPEGIPGRPGPVGPPGRAGEPGKPGRDGKGLPGPPGPKGDAGIQ
GYPGRKGEVGESGLPGARGLPGASGPKGEKGDAGIKGERGMPGLPGRHGSKGAPGMAAAG
MKGEPGTPGEKGDSGVPGRMGPPGLPGKRGQRGEKGRAGDPGIPGLPGPKGEKGIAENAL
VGAKGEPGPPGLPGPPGPKGEAGDIGQPGAAGSQGEKGERGSPGDQGPMGPRGPKGEPGK
DEMMDYDGNISEALQEIRTLALMGPPGRPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRG
KPGEMGPPGPQGLPGKDGPPGMKGEPGHAGGRGEKGEKGEPGQAGSPGLDGPTGEKGEQG
DQGMPGPSGLPGPIGLPGLTVSGPPGPQGPPGPPGLQGVPGPKGEAGIDGVKGEKGAQGE
KGDRGPLGLPGASGLDGRPGPAGIPGPIGPSGPAGPKGERGSKGDPGVAGPMGPAGLPGL
QGLPGDKGVRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccctgggcggccgggactaaaggggcaatctggagagaagggtgctccagga
gaagctggcatgtccatcattgggccccgtggtccacccggacagcctggaacaagaggt
tttcctggattcccgggccctattggcttggacggcaaaccggggcatcctggacagaag
ggagagatgggtgctgcaggtcccaggggacaacctggacccccaggacaaaaaggagag
aagggtcagtgtgcagagtacccgcacaggctgctgcctctcctcaattcagtgcggctg
gctccacctccggtcataaagagacgcactttccagggtgaacaaggacaggcggggatc
caaggtcccccggggccccctggtccaccagggccccctggaccagctggacctgaggga
atcccaggacgtcctgggccagttggaccccctggcagagcaggagaacctggaaagcct
ggcagagatggaaagggcttacctgggcctcctggaccaaagggagatgctgggattcag
ggataccctggcagaaagggtgaggtgggtgagtcgggcctgcctggtgcccgtggcctc
cctggagcctctggccccaagggtgaaaaaggggatgctggcataaagggggagagaggc
atgccagggctgccaggaagacatggctctaagggcgctcccgggatggcggccgcaggg
atgaagggcgagcctgggactccaggagaaaagggagattctggagtgccagggaggatg
ggccccccaggtttgccagggaagagggggcagcggggtgagaagggacgagctggtgac
cctggaattcctggacttcctggcccaaagggagagaagggaattgctgagaatgccttg
gtgggagctaaaggagaacctggccctccaggtctgcctggaccccctggaccaaaggga
gaagctggtgacattggtcagcctggagctgcaggatcacagggagaaaagggggaacgt
ggttcaccaggagaccagggacccatgggcccaaggggtcccaaaggagagcctgggaag
gatgaaatgatggactatgatggcaacatcagtgaagctctgcaggaaatacgaactttg
gccttgatgggacccccaggacgtccaggtgtggctgggcctccagggccaccaggacag
aagggtgaaattggcttgccaggtcctccaggccatgatggagaaaagggaccacgtggc
aagcctggagaaatgggcccccctgggcctcaggggctgccggggaaggatggacctcct
gggatgaagggagagccaggccacgctgggggcagaggagagaagggtgagaagggagag
ccaggacaagcaggctcaccgggtctagatggccccactggagagaagggagaacaaggt
gaccaagggatgccaggaccatcaggattgccagggcccattggacttccaggattgaca
gtgtctgggccccctggccctcagggccctccaggacctccaggtcttcagggtgtccca
ggacccaagggggaagcagggattgatggagtgaaaggagagaagggtgcccagggtgaa
aaaggagacagagggccactgggattacccggtgcttcaggtttagacggcaggcctgga
ccagcgggtattccaggaccaattgggccttcaggaccagcaggaccaaaaggagagagg
ggcagtaaaggagatcctggagttgcgggaccaatggggccagcagggcttcctggttta
caaggtctacctggtgacaagggagtccggggggagaggggcaagaaaggctctagaggg
tctaaaggggataagggagaccaaggagcacctggattagatgcaccctgtccgttggga
gaagatggccttccagttcaaggctgctggaataagtga
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