Agelaius tricolor (tricolored blackbird): 139595495
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Entry
139595495 CDS
T10815
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139595495 (CDHR1)
Cell adhesion molecules [BR:
atrc04515
]
Cadherins
Cadherin related
139595495 (CDHR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
139595495
NCBI-ProteinID:
XP_071294838
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MKHVRHFIPSLFLSLVHVCLVQANYAPYFFDNGARSTNGNMALLSLSEDTPVGTHVYTLN
GTDPEGDPVTYGLTYEAGSRRYFSVDKNLGNVTLIEELDREKEDEIEVIVSISDGLSTVS
EKVRILVMDANDESPEFINTPYIVQVPENTPSSSSIFKIEAIDKDTGSGGSITYFLQNIH
ANKFTIDRHSGVLRIKPGVTLDYEKSRTHFVVVVAKDGGGKLRGDNKVFSATTTVTINVE
DVQDTPPMFIGTPYYGYVYEDTLAGSEVLTVVALDGDRGKPNSIHYCIVNGSEGSFEISN
TTGAISVIKSPNQLKKEVYELKVKASEVSQEGDISEHTFAMVTIRVVDLNNHPPTFYGEN
GPQNRFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEA
QVTIIVENSAAIDYESFKVLTFKLLAIEVNTPEKFSSTADVVIRLLDTNDNVPKFSSDYY
IARIPENSPGGSNVVAVTATDPDSGLWGEIKYSIYGTGADLFLIHPSTGIIYTQPWAVLD
AEVNSKYNFYVKAEDTDGKYSLAEVFITVLDVNDHSPEFNENIQEKTMIIGSPVKIEAID
QDAEEPNNIVDYSIMQADPANVFDIDQSTGEIKLKSYIRSLDIIHNITNNKDCIWSLVVQ
AKDRGSPSFSTTAVLKIDITEETLHKGPMAAFLMQTKDNPMKALGVLAGVMGIMVLITIM
ISTAMFWRNKRSNKVMPVRRIIKKRQVPPSRTVRMEWLKFKRPSNAAEKFVVEEDVKSLH
NENSNNNVQVVPVPPAAPVPPPPPALAPRGDGPGWQVPTVSGSLTPKHVIKPPKKKGHSS
THNALVSELKMRFEKRNAAFGEPHI
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgtaaggcatttcatcccctccttatttctaagtttggtgcatgtttgcctg
gttcaggcaaattatgccccctatttctttgataatggagccagaagcacaaatgggaac
atggcacttctcagcctttcggaggacacgcctgttggcacccacgtgtacactctgaat
ggaactgacccagaaggagatcctgtgacatatggcctgacctatgaagctggatcaagg
cgttacttttctgttgacaagaatcttggaaatgttactttgattgaagagcttgacaga
gagaaggaagatgagattgaagttattgtcagtatttcagatggcctgagtacagtttct
gaaaaagtcaggatccttgtaatggatgccaatgatgagagcccagagttcatcaataca
ccttacatagtccaagtcccagagaacactccctccagcagcagcatctttaagattgag
gcaatagacaaggacacaggttctggaggaagcatcacctacttcttgcagaacatccat
gctaacaagttcacgatagaccgtcacagcggcgtcctgcgcatcaaacctggggtcacc
ctggactacgagaaatcaagaacacattttgttgtggttgtagccaaggatggtggtggg
aagctcaggggagacaacaaagtcttttcagccacaacaacagttactatcaacgtggag
gatgttcaggacacccctccaatgttcattgggactccctactatggatatgtctatgag
gacacgcttgcaggctctgaggtccttactgttgttgctcttgatggagacagaggaaag
cctaacagtattcattactgcatcgtgaatggaagtgaaggttcatttgaaatcagcaac
acaactggagccatttctgtgataaaaagcccaaatcagctcaagaaagaagtgtatgaa
ctaaaagttaaggcatcagaagtcagtcaggaaggtgacatctccgagcacacctttgcc
atggtgaccatacgggtggtggacctcaacaaccacccaccaaccttctatggagaaaat
gggccccagaacaggtttgagctgaccatgtacgagcatcccccagagggtgaaatctta
cggggattgaagatcacagtcaatgattcagatcagggagccaatgctaaattcaacctc
cgtcttgttggacctggtggcatcttccgagtggttcctcaaactgtcctgaatgaggct
caggttacaataatagtggaaaattctgctgccattgactatgaaagcttcaaggtgtta
accttcaagcttcttgcaatagaggtgaacacaccggagaaattcagctcgacggctgac
gtggtgattcgcttgctggacaccaatgacaatgtccccaagttctcctctgactactac
attgccaggatccctgagaactccccagggggctccaatgtagttgctgttacagctaca
gatccagattcagggctttggggagaaatcaagtactctatctatggaacaggagcagat
ctgttcctaatccacccatcaacaggtataatttacacccagccctgggctgtgctagat
gctgaagtgaactcaaagtataatttctatgtgaaagcagaggacacagatgggaaatac
agcttggctgaagtgtttatcaccgtgctagatgtcaatgaccactctccagagttcaat
gaaaacatccaggagaagacaatgatcattgggtcaccagtgaagatagaggctatagac
caagatgcagaagaacccaacaacattgtggattattccatcatgcaagcagatccagcc
aatgtgtttgacatagaccaaagcactggggagatcaagctgaaatcctatatccgatct
ctggacatcatccacaacatcacaaacaataaagattgcatatggtcattggtggtccag
gccaaagacagagggtccccatctttcagtaccacagcagttctgaagattgatatcaca
gaagagactcttcacaaagggcctatggccgcctttttgatgcaaactaaagataacccc
atgaaagccttaggagtgctagctggtgtcatgggcataatggtgctgataactatcatg
atctctactgccatgttctggcgcaacaagcggtccaacaaagtcatgccggtgaggagg
atcataaaaaagagacaggtgccgccatcccggacagtcaggatggagtggctgaagttc
aagaggcccagcaacgccgcagagaagtttgtggttgaggaggatgtgaagagcctgcac
aatgagaacagcaacaataacgtgcaggttgtccccgtgccgccggcagcccccgtgccc
ccgccaccccctgccctggctccccgaggcgatggcccagggtggcaggtgccaaccgtg
tccggctccctcactcccaagcatgtcatcaagccaccgaagaagaaaggtcacagcagc
acccacaacgccctcgtgtcagagctcaaaatgaggtttgagaagaggaacgcagctttc
ggggagccccatatctag
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