Agelaius tricolor (tricolored blackbird): 139595544
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Entry
139595544 CDS
T10815
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
139595544 (ZSWIM8)
BRITE hierarchy
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Paralog
GFIT
Other DBs
NCBI-GeneID:
139595544
NCBI-ProteinID:
XP_071294991
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Position
Unknown
AA seq
1823 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPTSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPTP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFSWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAENACEAGRTHGQEPGGACVQAGDRLWPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVSKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEG
PEPTLRSSSMAKKPPKDPVGEMGSCDDDLPSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEIAKEDDDKAEGEIEEEQDIFAGIKPLEQENRMEVLFACAEALYAHGY
SSEASRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPAVANQKSPSKHAAQSAAAIQQLPGTSVTQQAAVSTAVQSSPENFVEK
STQAESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASI
DSSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGG
ARAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSS
SGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNIL
VECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKE
QDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSAGGA
RAVSEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHT
QGLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTAP
SLAATAVSFPGVPVPSMAQIAVHPYHSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLS
SQPTSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSP
PYTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRT
PAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQN
LKRSKQTKELWQRVSLEMTTFSP
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaggaagactctctttgttccttcatctctgaggcggagagcctttgccagaac
tggagaggatggaggaagcaatcggctggacccacttcccccacggtcaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccattt
gaggtggtggagaaggtttatcctccagtgcctgaacagctgcagcttcgaatcgccttc
tggagcttcccagaaaatgaggaggatatcaggttgtactcgtgcttggcgaatggcagt
gcagatgagttccagcgaggggagcagctcttccgggtcagggctgtcaaagaccctctc
cagataggcttccatctaagtgccactgtggtgcccccgcagatggtaccccccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcgtgcagctgcacctgc
ggcgccggggccaagtggtgcgctcacgtcgtggcgctctgcctcttccgcatccacaat
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggttacaaagagac
cagttgcaaaaatttgctcagtacctaatcagcgaacttccacagcagattcttccaaca
gctcagcgcttgctggacgagttgttatcttctcagtctactgccatcaacactgtgtgt
ggagccccagatcccactgctggaccttctgcatcagatcaaagcacctggtacttagat
gaatctactctgagtgacaacataaagaaaacccttcataaattctgtgggcctactcct
gttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtcccctgcgagggagagaacctgaaggaatctggaacttg
ctttccattgtgcgggagatgtttaagaggcgggatagcaatgcagctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataactggctggtggtacagtgtgcga
acgtctgcgtcacacagcagtgccagtgggcacacgggacgcagcaatggccagtcagaa
gtagctgctcatgcttgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtcctcgacccaactattagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataacgttaagaggggtcagcacaagaaatcactggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcagttgggaggaagcttat
cccattcctgggattacatatagcagcactgacaagaagaactcgttctgttgggtaaag
gccatccaacagaggagctgccggttgcagtgtgcagaaaatgcctgtgaggctggcagg
acgcacggccaggagcccgggggagcgtgtgtgcaggccggggacaggctgtggccctct
ccccaggagccagccgtccgtccaaaggagctcacggggaagaggaaagtcgtctctgaa
acgccgcagagggttctgaggcggctctctgcagaaggggataaagctgtctataagact
gcagtgagcaaagcaaagttgccagtaagcaaaggcttgaccagtaaacatagtgggaaa
cgccgtatgagcagcgaggacagctctctggagccagacttggcagagatgagcctggat
gacagcagcttggcactgggggcagaagccagcaataccttcagttttacagaaagtcca
ctgagcaggagctacagggatgcctttgaggaggatgggggagtgtacttctccgaggga
cctgagcctactctcaggagcagttccatggccaagaaaccccccaaggatcctgtgggg
gagatgggtagttgtgatgatgacttgccttctgcagatgagaactccggtggtgtgagt
ctgaagccagaagaagtgggagagaatggtgcagcagggggaggggatgatggagaagag
gaagatgattaccaggtatactatctgaatccacaagagatagccaaggaagatgatgac
aaagctgaaggggaaattgaagaggagcaggatatatttgctggtataaagcctctggaa
caggagaaccggatggaggtcctgtttgcctgtgcagaggcactgtatgcacacggatac
agtagcgaggcgtcccgcttgactgtagagcttgccagggacctactggccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtgtcaaccagcaag
cagacatggatggcaaccaacaccttgtctaaagctgctttcttgctgactgtcttgagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccacctgcctctaccaaggctctggaggtgaagctggcttaccaggaatctgagatt
gcagccctcttgaagaagattcccttgggcaccaatgagatgaacactattcgaggaaga
gccgaagaactgcgagaagggaccttgtgtgattaccgtcctgtcctgcctctgatgttg
gcaagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctctagaccc
ccaagccgtaattggaataatgaaatgcctggagatgaagagcttggttttgaggcagct
gttgctgctcttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcacacgaagggagaaaggggatctggcactagccctgatgatcacttacaaggatgat
cagtctaagctgaagaagattttagacaaactcctggacagagaaagtcaaactcacaaa
ccacagacgctgagctccttctactcatccagcaagcctgcagtggccaaccaaaaatct
ccttccaaacatgctgcccagtctgctgcagctatccagcagcttccagggacttctgtc
actcagcaagctgctgtaagcactgcagtccagagcagtcctgagaattttgtggagaag
agtacacaggcagagagctctcagaggtccccctgtgagccagctgcagaggccactgtt
ttgaaacaggaggggaaggtccccagtcgcctggcccttggaaaccgaggtggatacaat
gggagatgctggggctcacctgtcaggcagaagaagaaacacacaggcatggctagtatt
gacagcagtgctcctgaaaccacttctgacagttctccaacactcagtcggcgtcctcta
cgtgggggctgggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagt
tcttcaagtgattcactgggatcttcctcttccagtggcagtaggagagcaagtggggga
gcccgtgcaaagactgtggaagttggcaggtataaagggagacggctggagagccatgct
cctcatgtcccaaaccagccctcagaggcagctgctcacttctactttgaattggctaag
acagtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcctcc
agcggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctg
tatgcactagggctgcacaacttcgtgtctcccaactggctctctcgaacttactcctca
catgtctcctggatcacagggcaggccatggagattggtagtgcagccttgaacatctta
gtggagtgttgggatggacatctaactcccccagaggtggcatcattggcagacagagct
tcacgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctg
cctcatgcccatgccctgaacccaaacgagatccagagggctctggtgcagtgtaaggaa
caggacaacctgatgctggaaaaggcctgcatggcagtagaagaggcagctaaaggaggt
ggtgtgtacccagaagtcctgtttgaagtagctcatcagtggtactggctttatgaacag
actgttggtgggaccccagcccagagagaaggtgccactggctgcagtgccggtggcgcg
cgggccgtgtccgaagcagcacgtggcctggcagacagccgggtgacctcagagccaacc
acggtgacagtggcagctgcagtaactgcagcagcaaccgtcatgccagtgatctctgtg
gggtcgaccatgtaccagcagcacacggtggcagggccagcaatggcacatacacacacg
cagggtctccacccttacaccacccttcagactcacatcccctgtaacccccagtatatc
ggacacaccatccagcacatgccgcgcccagcagtcttcccggtccctggctcggcgtat
ccccagggtgtccacccagcattcatcggggcgcagtacccttactcagtgactgcaccg
tccctggcagctacagcagtgtccttccctggcgtgcccgtcccctccatggctcagatc
gctgtgcatccctatcacagtgagacgggactgtcgctgtcttccaatgtagcgctaggc
agtgtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcc
tcacagcccacctccctcgttacggggggttttcctgccgaggatgagcagcacagtcag
cctgtgagcccccagggtctgcactacctccactctgcataccgagttgggatgctggct
ttggagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccg
ccctacactgaggatgtaaaatggctgcttgggttagctgcaaagttaggtgtaaactac
gtgcatcagttttgcgttggtgctgccaagggggtgctgagcccttttgtgcttcaggag
atcatcatggaagctctacagaggctcaaccctgcgcatgtgcacaaccacctgcgcacc
ccagccttccaccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcat
cggctgatccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgcc
agaagcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaac
ctaaagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccacc
ttctcaccatga
DBGET
integrated database retrieval system
