Agelaius tricolor (tricolored blackbird): 139595637
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Entry
139595637 CDS
T10815
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139595637 (BTAF1)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139595637 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_MROH2B_C
HEAT_2
TPR_Trm732_C
HEAT_GCN1
HEAT_GCN1_C
ARM_ECM29
ARM_TBCD_2nd
UFL1_C
Motif
Other DBs
NCBI-GeneID:
139595637
NCBI-ProteinID:
XP_071295262
LinkDB
All DBs
Position
Unknown
AA seq
1844 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRSKQEPGSESPNEDSPSTDRLRFDRFDICRLLKHGASLLG
SAGAEFEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSP
VLLVNKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDG
EPEEKRRKVANVVINQPATDSKTLVENAQEEANEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDMINT
LLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVHLQSQKVPFILNTLWDALLELDDL
TASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQGQIQNKEVIQEYIAGADSIAED
PATRDYVVMRARMMAAKLLGALCCCICDPGVNTVTQEIKPAESLAQLLLFHLNSKSALQR
ISVALVICEWAALQKECTTVAICVQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLA
DSHIDIGNRVNCSVFTIDQANELVTSVFNEVTSSFTLNPKVLQQLDSKRQQVQMTVTETN
QEWQVLHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIKKEENTLIQNYVASCIAKLLQ
QCTTRSPCPNSKIIKNLCNSLCVDPHLTPLASCPAQPQSSHENSKGPNSDKDGMQHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKAPKAPIADLPTGSSGSIPTELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMATGLPHLWDAMVGSLRNNIHINNFDRKLLLEKGDAPAQELVNSL
QVFETTAASMDAQLHPLLIQHLPHLYMCLQHPSTAVRHMASRCVGVMSKIATMETMNIFL
EKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTNSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLENYEIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQEYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCILSPLQVQLYEDFAKSRAKCDIDETVSSISLNEETEKPKLKSTG
HVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAQNSSLRDIQHAPKLSALKQLLLDC
GLGNGGSSESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDGKT
EKADTSTSSGKASMKSVLENLGELWDQEQYDTEYSLENFMHSLK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggctcgatcgtctctttattttactggacactggtacaacacctgta
acaagaaaagcagctgcacagcaacttggggaagtagtgaaactgcatcctcatgaactg
aataatctcttatctaaagtgttagtgtatttaagaagcacgaactgggatactcgtatt
gcggctggccaggctgtcgaagccatagtgaaaaatgtacctgagtggaatccaactcca
agatcaaaacaagaaccaggctcagaaagtcctaatgaagattcaccttcaacagaccgg
ctgcgttttgacagatttgatatctgtcggttgttaaaacatggtgcatctcttcttgga
tctgctggtgcagaatttgaagtccaagatgataaatcaggtgaaattgatcctaaagag
aggatagcacgacagagaaaactgctgcaaaagaaactcggcttagatatgggtgctgca
attggaatgaatactgaggatctgttcaatgatgaagatttggactattctccttctcca
gttttactagtaaacaaacaacctactcttcaggctgctgagttaattgactcagaattt
cgagctggtatgagcagtagacaaaagaataaagccaaaagaatggctaagctatttgca
aagcaaagatccagagatgcagtggaagctaatgagaagagcaatgatagcactgatggg
gaaccagaagaaaaaagaagaaaagttgcaaacgttgtcatcaaccagcctgccacagac
tcaaaaacattggtagaaaatgctcaggaagaggcaaatgaatggcctctggaaagcttt
tgtgaagaggtgtgcaatgatctctttaacccttcttgggaggttcgacatggtgcaggt
actggactgagagagatacttaaagctcatggtaaaagtggtggtaaaatgggagatagc
tctttagaggagatgattcagcagcatcaggagtggctagaagacttggttattaggctt
ctttgtgtgtttgcactagacagatttggagactttgtttcagatgaagtagtggcacca
gtacgtgagacttgtgctcagactttgggagtagtattgaaacacatgaatgaaactggt
gttcataaaactgtggatgttctcctgaagctgcttacacaggaacagtgggaagtgaga
catggtggtctcctaggaataaagtatgctttggcagtacgtcaggacatgatcaacact
ttattgcctaaagtgttgcctgcaataattgaaggtctgcaagatctggatgatgatgtc
cgagctgttgctgcagcatctttagtaccagtagtggaaagcctggtccatcttcagtcc
cagaaggtgccttttattcttaataccttgtgggatgcacttctggagttggatgacttg
acagcttccacaaacagtatcatgatccttctttcatcccttctgacttaccctcaggtc
cgcaaatgcagtattcagcaatccctgacagttttggtcccacgtgtgtggccattcttg
caccacacgatatcttctgtgcggaaagcagcactggaaacattattcacactgttgtct
acccaagaccagagttcttcaacatggctgactccaattctgcaagacatgttgaggcac
atatttcagttttgtatcttagaaagcaaccaagaaattctggatcttattcacaaggtg
tggctggaactgttaaacaaggcatctgtacagtatgttgttgcagctgcttgtccatgg
atgggagcctggctctgcttaatgatgcagccatctcatttgcccattgacttaaacatg
ttgctagaagtaaaaaccaggtccaaagaaaaagcaggtgctaaactgcgtcaaggtcaa
atccagaacaaggaagtgattcaggaatacattgctggggcagacagcattgcagaagat
ccagcaacgagggactacgttgtcatgcgtgctcggatgatggcagcaaagttgctggga
gcactttgttgctgcatttgtgacccaggtgtaaatactgttactcaagaaataaagcca
gctgaatcattagctcagctactgctcttccacttgaattctaagtctgccttgcagagg
attagtgttgcgttagtaatctgtgagtgggcagccttgcaaaaggaatgtacaactgtg
gctatttgtgttcaacctcgtttacttggggtcctttctgaacatctctattatgatgaa
attgctgttccttttacacgaatgcaaaacgaatgtaaacaactcatctcgttgctagct
gattctcacattgacattggaaacagagtaaactgcagtgtatttacaatagatcaagct
aatgagctggttacttctgttttcaatgaggtgacatcatcctttactttgaatcctaaa
gttctgcaacagttggacagtaaaaggcagcaagtccaaatgactgttacagaaacaaat
caggaatggcaagtgttgcatctgcgagtccatacctttgctgcatgtgcagttgtgaac
ttgcagcaacttccagaaaaactaaatcctgttataaaacccttaatggaagctatcaaa
aaagaagagaatacactcatacaaaactatgtggcttcatgtatagcaaagttacttcag
cagtgtacaaccaggtctccttgtcccaactccaagattataaaaaatctttgcaattcc
ctgtgtgtggatccacatcttaccccactggcatcatgtcctgcacagcctcagagtagc
catgaaaactcaaaagggcccaactctgataaagatgggatgcagcacacagttactaag
cacaggggaataattacactgtacagacatcagaaagctgcttttgccatcacaagtcgg
cgaggtcctactccaaaagctccaaaagcccctattgcagatctccccacaggcagcagt
ggaagcattcctacagaacttgatgaggctcagaaaccttatgttgtacagagaagagga
gctgaatttgccttatctactatagctaaacattttggtgctgaaatggcaacgggattg
ccacatctctgggatgctatggttggttcgttaaggaacaacattcacataaataatttt
gatcgaaagttgttactggaaaaaggagatgctcctgcccaggagctggtgaattccttg
caggtttttgaaacaacagcagcttcaatggacgctcagctacatcccctgttaatacag
catttgcctcatctttacatgtgccttcaacatcccagcactgctgtgagacacatggct
tcccgttgtgtgggtgttatgagcaaaatagcaaccatggaaacaatgaatatctttcta
gagaaagttctaccgtggctgggagcaatagatgacaacaccaaacaagagggtgcaatt
gaagcacttgcatgtgtaatggagcagctggatgttggtattgttccatacattgttctt
ctggtggttccagttctgggtagaatgagtgatcagacaaacagtgtacgttttatggcc
actcagtgctttgccacactgattaggctgatgcctcttgaggctggtataccagaccca
ccaaacatgtctgaagaattaatcaggatgaaggctaaagaacgtcactttctggagcaa
ttactggatggaaaaaaactggaaaactatgaaattccagtaccaatcaaagcagagctc
agaaaataccagcaggatggagtgaactggcttgcatttctcaataaatacaaacttcat
ggaattctttgtgatgacatgggtttgggaaaaactttacaatccatttgcattcttgca
ggtgatcattgcctcagggctcaggaatatgcaagaacaaaactggtggacagtgttcct
cttccctccttggtggtgtgtcctcctacactcacaggacactgggtggatgaagtgggc
aaattttgctcaaaagaatatcttaatccattgcactatacaggacctcctactgagaga
gcaagattgcaacaccaggtgaaaagacacaatctcatagtggcttcatatgatgttgta
agaaatgacatcgacttcttcagaaatattaagtttaattactgcattcttgatgaaggc
catgtaataaaaaatggaaaaacaaagctgtcaaaagcagtaaaacagctgactgctaat
tacaggataattctttctgggacaccaatccagaacaacgtgttggagttgtggtcgttg
tttgacttcctaatgccaggattcctgggcactgagcgccagtttgcagctcgttacggc
aaaccaatcctggcaagcagagatgcccgcagctccagccgagaacaagaggctggggta
cttgcaatggaagctctgcaccgccaagtcctgccattcctgctaaggagaatgaaagag
gatgtgctgcaagatcttccacccaaaattattcaagattattactgtattctcagtcct
ctacaggttcagctttatgaagattttgccaagtctcgtgccaaatgtgatattgatgaa
acagtttcttcaatttcactgaatgaagaaactgaaaaaccaaagcttaaatctacaggt
cacgtatttcaggcattgcagtacttaaggaagctctgcaaccatccagcattagtgctc
acaacccaacacccagagtacaagagaattacagagcaacttgcagctcagaattcatcc
cttcgagacatccagcatgcacctaagctgtctgctttgaaacaactgctgctggattgt
ggtttggggaatggtggatcttcagaaagtggtacagaagcagttgtggcccagcacaga
gtgcttatcttctgtcagctgaagagtatgctggacatagtggagcacgaccttctgaga
cctcagttaccttcagttacgtacctgcgactggatggcagcattcctgctgggcagaga
cattccattgtttcccggtttaataatgacccatctatagatgttcttttgctcaccact
cacgttggtggactgggacttaacttgacaggggctgacaccgttgtgtttgtggaacat
gactggaacccgatgagagacctgcaagccatggatcgggcacatcgcattgggcagaaa
cgtgttgttaatgtatatcgcctgataaccaggggaactctggaagagaagatcatgggt
cttcaaaagttcaaaatgaatattgcaaatacagtgatcagccaagaaaatgcaagccta
cagagcatgggaacagagcagcttcttgatctgttcactctcgacaaggatggcaaaact
gaaaaagcagatacctctacctcttctgggaaagcatcaatgaaatcagtactcgaaaac
cttggagaactatgggatcaagagcagtatgacactgaatacagtcttgaaaactttatg
cattcattaaagtaa
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integrated database retrieval system
