Agelaius tricolor (tricolored blackbird): 139595671
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Entry
139595671 CDS
T10815
Symbol
RHO
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
139595671 (RHO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
atrc04030
]
139595671 (RHO)
G protein-coupled receptors [BR:
atrc04030
]
Rhodopsin family
Vision
Opsin
139595671 (RHO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
TAS2R
DUF8525
Motif
Other DBs
NCBI-GeneID:
139595671
NCBI-ProteinID:
XP_071295304
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MNGTEGQDFYVPMSNKTGVVRSPFEYPQYYLAEPWKFSALAAYMFMLILLGFPINFLTLY
VTIQHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMNGYFVFGVTGCYIEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFSWIMALACAAPPLFGWSRYIP
EGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFMIPLAIIFFCYGNLVCTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVISFLICWVPYASVAFYIFTNQGSDFGPIFMTIPAFFAKSSAI
YNPVIYIVMNKQFRNCMITTLCCGKNPLGDEDTSAGKTETSSVSTSQVSPA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacagaaggccaagacttctacgtgcccatgtccaacaagaccggggtggtg
cggagcccctttgagtacccccagtattacctggccgagccttggaagttctcggcgctg
gctgcctacatgttcatgctgattctgctcggcttccccatcaacttcctcacgctgtac
gtcaccatccagcacaagaagctccgcacacctctgaactacatccttctgaacctggcc
gtcgccgacctcttcatggtcttcgggggcttcacaaccacgatgtacacctccatgaac
gggtactttgtctttggagtaacagggtgctacattgaaggcttctttgccacactgggc
ggtgaaattgctctctggtcactggtggtcctggctatcgaaagatacgtagtggtctgc
aagcccatgagcaacttccgctttggagagaaccatgccatcatgggtgttgccttctcc
tggatcatggccttggcgtgtgcagctcccccactttttggctggtccaggtacatcccc
gagggcatgcagtgctcgtgcgggatcgactattacactctgaagccagaggtcaacaat
gaatcttttgtcatctacatgtttgtggttcacttcatgatcccgctggcgatcatcttc
ttctgctatgggaacctggtctgcacggttaaggaggctgccgcccagcagcaggagtct
gccaccacccagaaggcagagaaagaagtgactcgcatggtcatcatcatggtcatctcc
ttcctgatctgctgggtcccctatgccagcgtcgccttctacatcttcaccaaccaggga
tcagacttcgggcccatcttcatgaccatcccggcattctttgccaagagctcggccatc
tacaaccctgtgatctacatcgtaatgaacaaacagttccgtaactgcatgatcacaacc
ctctgctgtggcaagaaccctctgggtgacgaggacacatctgctggcaagacagagacc
tcctccgtctccaccagccaggtctctcctgcatag
DBGET
integrated database retrieval system
