Agelaius tricolor (tricolored blackbird): 139596270
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Entry
139596270 CDS
T10815
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139596270 (CHD9)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139596270 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
139596270
NCBI-ProteinID:
XP_071296493
LinkDB
All DBs
Position
Unknown
AA seq
2893 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQ
SRNSTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVSNSQQFSSPYSYSNNHISPTSLLQPTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNSTLNSSTFQMLHSAHPQGNFSSSKLSPVNINFPAS
TGSASQISHFTDPIESNGFTSLDDNLLHQVETHSEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTPSSELVRAPSQTQIHPWHSSVSNQHLQGRSRATLQGQP
PSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKK
QKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGDEKPKLRRPCDRSSGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPAL
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
IQPAFPVQTSMMQLPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFE
DTKAKNENLKEDPQSSEDESMSTEETQTILKSEPLSPKNGTPVQMTDHRPSVKAETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSGYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDSTTVASFYTTKLLDSSGPAAEYSEPSAPTPPLAAVKEEYDQSPQLSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFP
KSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFMNRNKQPNHVNPGINS
CQVAAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFERILTGPVVREEVSRRGRRPKSEIAKA
TAAAAAASAHSVSVNPLLANGLLPGVELPGLQALQHNLHNLQSLQVTAGLMGMPAGLAAA
AGEAKNVAAMFPMLLSGMAGLPNLLGMGGLLTKSTESASEEKKGNDSKETDAKKERTEDQ
NTDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIF
DVQNSESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDST
SSSSEDSDSSDED
NT seq
8682 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaagcttcac
tcagtaaatcagtcttttaatagctcagctgacaatgtcttatcaccacactctcagttc
aattgttcaccagttcacccgcaaaaccagtccaatgggatgtttccagatgtggccgat
ggtagtcctatgtggggtcatcaaaccgccacgactgtttccaatcaaaatgggtcccct
ttccaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcgctacggccgcagcag
agcaggaacagcacggggcaggatgctctgagtcagccaaaagacttcatggaagttaac
gtgtctacttccctcagagtcagtgttaaccacccaccttcagtttctaatccatcgact
tcacagcagcctctgtccgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
agtaatagtcaacaattttcatctccgtattcctactctaataatcatatttctcctact
agccttcttcagcctacaacagctctttctactagccagcagacacactctatctctgac
ttcactggaagtgatgcctttacatctcaaacagggaccaagcaagaaacaaccgagcac
atgttgaatcctaactcaactttgaattcaagtacttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcgaaactctctcctgtgaatattaattttccagcttct
actggttctgcttctcagataagccatttcactgaccctattgaaagcaacggttttacg
tccttagatgacaacttacttcatcaagtggagactcacagtgaaccattcacaggactt
gacccggatgacctcttgcaggaagaccttctgccacagtttgatgactctgcctttgtc
caggatagcacaagccatgttttagagcatgacctggaacaccacataaccccacagcaa
gtgacaccgtcgtccgaactcgttcgagcaccgtctcaaactcagatccatccttggcat
tcttcggtttctaatcagcacctgcagggcagaagtcgtgcaaccttacaaggacagcct
ccttccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtgagg
ggaatgtctgaaaagaagcagaagaaaaaaacagactcggaaagtaaacaagagaaggcg
aatcgcataatatctgaagcaattgcaaaggcaaaagagagaggagagagaaacattcca
cgagtaatgagccctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaagaag
ggtagaaaagttaaatccaaaccaaaggataaggagactaaaaagccgaaaactggttcc
tcttccaaaattaaagagaaaacaaaaattggaaagctgatcatcacactgggcaaaaag
cagaaaagaaaaaatgaatcttcagatgaattgtctgatgctaagcagactccacagcgg
ccactgaaggatgaagactcccagaagagaagatcaaatcgtcaagttaaaaggaaaaag
tactctgaagaaggagaagggaaacaatcagaagaagaagcagctaaagtttctgttaaa
atcaagaagaattctgcccctttacctgctgagcagcctttacaattatttgtggaaaat
ccaagtgaagaagatgcagcaattgtagacaaaatattatcctccagggtaataaagaaa
gaaatatctgcagggatgacagtagatacagaagagttttttgtaaaatacaagaactac
tcatatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccag
cagaaaataaagcggttcaaagtaagaaaggcacaaagagctcacttttttgcagatatg
gaagaggaaccttttaatcctgactatgttgaagtagaccgggtattagaagtgtctctt
tgtgaagataaggacactggtgagcctgttatttactatttagtaaaatggtgttcgttg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaac
tcctggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcatttta
gcagatgaaatgggccttggcaaaaccatccagtccattacattcctgtatgaaatcctc
ctgacgggtataagaggccctttcctgatcatagctccgctctccaccataacaaactgg
gagcgcgagttccgcacgtggactgacctgaacgtcgtggtgtaccacgggagcatgatc
agcaggcagatgattcagcagtatgagatgtacttcagggactcccagggccgtattgtt
cgaggtacctacaggttccaggccattatcacaacgtttgaaatgatccttggtggctgt
ccagaattaaatgcaattgagtggcgttgtgttattattgatgaagctcacagactgaag
aacaaaaactgcaaacttttggaaggactaaaattaatgaaccttgagcataaagtgctg
ttaacaggtaccccactgcagaacacagtagaagaattatttagcctccttcattttctg
gaaccgttgcgttttcctgctgagtctacattcatgcaggagtttggagaccttaaaaca
gaggagcaggttcagaaactacaagctatcctgaaacccatgatgctcaggagattaaaa
gaagatgtagaaaaaaagctggctcctaaggaggaaaccataatagaagtagaactaact
aatattcagaagaaatattaccgagcaattttggagaaaaattttgccttcttatccaaa
ggagcagggcaggcgaatgtacccaatctggttaacactatgatggaactcagaaaatgt
tgtaatcacccttatctcatcaaaggtgctgaagagaagatccttggagagtttaaagaa
acatatagtccaagtgctcctgacttccacctacaagcaatgatccagtctgctggtaaa
ttggttcttattgataagcttcttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcaaatggtgcgctgccttgatattttggaggattaccttatccataaaaggtac
ctgtacgagcgcatcgacgggcgcgtgcggggcaacctccggcaggcggccatcgaccgc
ttcagcaaacccgactcggatcgcttcgtcttcctgctctgcaccagggctgggggcctg
ggcatcaacctgactgcagcagatacctgcatcattttcgattctgactggaatccccaa
aatgacctgcaggctcaagcccgatgccacaggattggtcagaacaaagcagtgaaggtc
tacaggctgatcacacgtaattcctatgagagagagatgtttgacagagcaagtctgaaa
ctgggactggataaggctgtcttgcagagtatgagtggaagagaaaacagtgttggtggt
atccaacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcctatggtgcc
ataatggatgaggaggatgaaggctccaagttctgtgaggaggacattgaccagatcctg
cagcgtcggaccaaaaccatcaccatcgagtccgagggaagaggctccacgtttgccaag
gctagtttcgttgcatctggaaacagaactgatatttcactagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaattgatattgatgctatcagtggtagaaacagcctt
gtcattgataccccaagaatcaggaagcaaacgcggcccttcagtgctaccaaggatgag
ctggcagagctgtcggaggtggagagcgagggtgacgagaagcccaagctgcgccggccg
tgcgaccgctccagtggctacgggaggacagagtgcttccgtgtggagaagaacttgctg
gtctatgggtggggccgatggagagaaattctgtcccacggccgcttcaagaggcagctg
aacgagcaggatgtggagatcatctgcagagccctgttagcctactgccttgttcactac
agaggggatgagaaaataaagagttttatatgggatctcatcaccccaacagaggatggg
caaacacgagagttacagaaccaccttggcttatcagcccctgtgcctagaggaagaaaa
ggaaaaaaagtgaagacccaggctagcacatttgatatacacaaagcagaatggcttcga
aaatacaatccagagcatctgttgcaagatgaaggctacaaaaagcacataaaacaccat
tgcaacaaagtcttactccgagtaagaatgctttattacttaaagcaagaagtcattggt
aatgaattccaaaaggtctttgatggaactgatgccagtgaaattgatgtttgggttcct
gagccagaccactctgaagttcctgctgagtggtgggatgcagatgcagataaatctctt
ctaattggagtttttaaacatggttatgaaaaatacaacactatcagagcagacccagct
ctttgcttcttggaaagggttggaaaaccagatgagaaagcagttgctgctgaacagaga
gcaaatgattatatggatggggatgtggaagatccagagtataaaccagcaccagcactg
tttaaagatgacatagaggatgatgtttcatccccaggtgatctcgtaatagcagatgga
gatggacaaatgatggaaggggacaaaatctattggcccactcagtctgccttaacaacg
cggctgcgccgcctgataaccgcttatcaacgcaccagtaaaaacaggcaggcccagcag
atccagccagcattcccagtacaaaccagtatgatgcagctgccatatgaagaagctgca
ctaaatccaaagatggctgctaagattgaaagacagcaaagatggacaagaagagaagaa
gctgacttttacagagtcgtgtccacatttggagtggtgtttgaccctgagaggggacgg
tttgactggaccaagtttcgagcgatggctcggctgcacaagaaaaccgatgagagcttg
gagaagtacctgtatgcatttatgtcaatgtgcaggagggtctgtcgcctcccctcaaaa
gaagaactcgtggacccaaaccttttcatccagcccattaccgaggaacgcgcttcccgg
actctgtaccgcatcgagctcctgcgcaaagtgcgggaacaggccctcaggcacccccag
ctctttgagaggctcaagctgtgccagccaaaccctgacctgcctgtctggtgggagtgt
ggcactcacgacagggatctgcttattggagctgctaagcacggagtcagcaggacagat
tatcatattcttcgtgatcctgagctctcatttatgtctgcccagaggaactataatcaa
aacaaagtggctctctcaaggacttctactccactcttgcaccagtaccagatggcatta
tctgcttctcctcttacacctcagtcaagactgtcagatgctaaagtgaatgcttttgag
gacacaaaagctaaaaatgaaaatctgaaagaggaccctcagtcttctgaagatgaatct
atgtctacagaggagacacagacaatactgaaatctgaacctttgagtcccaaaaatggc
accccagtacaaatgacagaccacagacctagcgtgaaggctgagacagacagacgcatg
gtggcagcaaggacagagcctctaacgccaaacccagcttccaaaaaacagagagtcagc
aaaaggggctctgactcgagctctgactcagactctgactcagatagatcatcctgttct
tccaggtcatcatcttcatcctcttcgtcttcctcatcttgttcccactctcgatctggc
tctagctcttcatcgtcctcatcttgttcttcagcatcttcatcgtcctcctcgtcgtcc
tcatcgtcatcgtcgtcatcatcatcatcgtctgaagagagtgatagtgatgaagaggag
gcacaaaaacgtgcagaaggaactccacatataaaagcctatgatgaagagagtgtggcc
tctctgagcaccacacaagatgagacacaggacagtttccagatgaacaatgggacacca
aattctggttatctcctacaaggtggatacatgttggctgcatcctactggccaaaggat
cgagtcatgattaaccggctggacagcatttgtcagacagtgctgaagggcaaatggcct
tcagcccgaaggagctacgacagcaccaccgtggcatccttctacaccaccaagctgctg
gacagctcagggccagctgcagagtacagtgagcccagtgcacccacaccccctctggca
gctgtaaaagaagaatatgaccagtctccccagctgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccgtttgaaagcgaggagggtgcattgggtcagcagcaa
tatctggctcggctccgtgaactccagaatgcttcagaaaccagccttgtcaacttccca
aaatcacttcccaaatcaggtacttccagtcacttaacagccagtgccaacggagtcatc
gttgacagtcagcctgtagtcaaaaagagacgaggaagaaggaagaatgtggagggggtt
gatgtcctctttatgaatagaaataaacagcctaaccatgttaatccaggtattaactcc
tgccaggttgctgcaggaataaacccagcactcacttacacacagtcccaaggcatgctc
gatgcagagagcccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgat
gatgcccctaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaa
gattcaggagcttgtattcctaggatgcagctgcacgatgggagacccaaacaaaaaaga
caccgttgtcgaaaccccaataaactggatgttaacagtttgactggtgaagaacgtgtt
cagctcataaatagaagaaatgcaagaaaggttgggggtgcatttgctccccctctgaag
gatttgtgcagattcttgaaagaaaatccagagtatggagtggctcctgagtggggagaa
gtggtaaaacagtctggcttcctccccgaggggatgttcgagcgcatcctgacgggcccg
gtggtgcgggaggaggtgagccgcaggggcaggcgccccaagagcgagatcgccaaggcc
acggcggccgcggccgcagcctcggcgcacagcgtgtccgtgaaccccctgctggccaac
gggctgctgcccggtgtggagctgcccggcctgcaggccctgcagcacaacctgcacaac
ctgcagtcgctgcaggtgacggcgggactgatgggaatgccggccggcctcgctgccgcc
gcgggagaggccaagaacgtggcggccatgttccccatgctgctgtcggggatggccggg
ctgccgaacctgctgggcatgggagggctcctgacaaagtccacggaatccgcttcggag
gagaaaaagggaaacgattcgaaggagacggatgcaaagaaggaaaggacagaagaccaa
aacacggacactggtggtgaaaactctgtttccagttctccttcgacatcctctgccgcc
gcagctgccaatcctctctctcttaaccctttacttttgtccaacatactttacccaggg
atgcttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatattttt
gatgtacagaacagtgaaagcaatgacacgggctcagccaagcccacagaagaaaaggag
gaaaattctagggttagagatcaggaagacaaagggggaacagagccaagctctcacaat
gaaaacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagtaca
tcgtcttcatctgaggattcggattcgagcgatgaagactga
DBGET
integrated database retrieval system
