Agelaius tricolor (tricolored blackbird): 139596370
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Entry
139596370 CDS
T10815
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139596370 (CTCF)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139596370 (CTCF)
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139596370 (CTCF)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139596370 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
139596370
NCBI-ProteinID:
XP_071296721
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MKRTNQSRQKCRSVKNINQEGEMEGEAVDAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGSEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVSQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAAAQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
AEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgtcaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagtcgacgctattgtggaggaatcagaaactttcattaag
ggaaaagagaggaaaacctatcaaagacgccgtgaaggtgggcaagaggatgatgcttgt
catataccaccaaaccaagcagatggaagtgaagtggtgcaggatgtcagcagtggggtg
cagatggtgatgatggatcagctggatccaactcttcttcaaatgaagaccgaagtaatg
gaaggtgcagtgtctcaagaaactgaggctactgtggatgacacacagatcataacactt
caggttgttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagta
cctgtaccagtgactgtacctgttgccaccacgtctgtggaagaactgcagggagcttat
gaaaatgaggtttccaaaggaggcctgcaggagggggagcccatgatctgtcacaccctc
cctttaccagaaggcttccaagttgtgaaagtgggtgcaaacggtgaggtggagacactg
gaacaaggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggc
aaagatgtggatgtctctgtatatgactttgaagaggagcagcaggagggtttgttgtcc
gaggttaatgcagaaaaggtggtgggcaatatgaagccaccaaaaccaacaaaaattaaa
aagaaaggggtaaagaagacattccagtgtgagctgtgcagttacacttgtccacgtcgt
tccaacctggaccgccacatgaaaagccacaccgatgaaagaccacacaagtgccatctc
tgtggcagggctttcaggacagtcacattgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacacacccacgagaaaccattcaaatgttccatgtgtgactat
gccagtgtggaggttagcaaattgaaacgccacatccgctcgcacaccggggagcgcccg
ttccagtgcagcctgtgcagctatgccagcagagacacctacaaactgaagaggcacatg
aggacccactccggagagaagccatatgaatgttacatctgccatgctcgcttcactcag
agcggtaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaattccac
tgtcctcactgtgatactgttatagcaagaaagagtgacctgggtgtccacttgcggaag
cagcattcctatattgagcagggcaagaagtgtcgctactgtgacgccgtgttccatgag
aggtatgccctcatccagcatcaaaagtcccacaagaacgagaagcgcttcaagtgtgac
cagtgtgattatgcctgcagacaggagcggcacatggtcatgcacaaacggacccatact
ggagaaaagccttatgcctgtagccattgtgataaaaccttccgccagaagcagctcctt
gacatgcacttcaagagataccacgaccccaactttgtccctgctgcctttgtctgctcc
aagtgtggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggggaaggagagaatggaggagagacaaagaaaggcaaacgtggccga
aagagaaagatgcgttcgaagaaagaagattcctctgatagtgaggaaaatgctgaacca
gatttggatgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaa
gttgagcaagaggctcctgcaccacctcccagtaagaaaagaagaggaagaccaccaggc
aaagctgctgcacaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaacattatagttgaagtgaagaaggaacctgatgcagaaaca
gcagaggaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcacc
cctgagatgattctcagcatgatggaccggtga
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integrated database retrieval system
