Agelaius tricolor (tricolored blackbird): 139596383
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Entry
139596383 CDS
T10815
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139596383 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
139596383 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139596383
NCBI-ProteinID:
XP_071296740
LinkDB
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Position
Unknown
AA seq
1402 aa
AA seq
DB search
MASCSSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPLGSGDGAAL
AKPVHRSISLGALQEKQVICLSGDDSSTCLVISAKDVEVVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTFRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPDIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGAEQNRELKMWCTVSWTCLQTVRFSPDIFSSMNILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EETDNLSVEGAQGSGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTSASMPAHGSH
EEFAFPDHMADLGTEGLGSEKESVHGSQPDLRRIADLPVPADFLSLSSDAKPKLMTPDAF
MTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVTDASLPRASEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVAPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAAAPALPGEGLEPGHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
AQRLPVKDWKVKASPRASPKLKRKGKKDDGDMNQSPRSSNNQVTAEFQEEVMCILRSQQR
ELSELRQTQMELLQRLTDHLDAIQSSLMGHMERVIDSQQEQEQRRLERVLLEGQQRNGQL
QEQLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPTVSQLSNTIATKLTAVEG
TLKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLEAHLKNKKVREQEVREPLLGQLRQLISALQSSTEQLASSIAASVHAE
LQHQLHLIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHM
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEDAVMHLDQSDPITRDHMGSVMNQVRQKLFQFLQVEPHN
PLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgctccagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggccgggaggttcggtgaacgagaaccagaggccgtcgaattcgtacaac
ggggacctgaatgggctgctggtgcctgacccccttgggagcggagatggagctgctctg
gccaagccagtgcatcgcagcatctccctaggagccctgcaggagaaacaagtcatctgc
ctttctggcgatgacagctccacatgcttagtgatatcagcaaaagacgtggaggtagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgctagatatgactgggagcagaagtactattatggcaatctgatagctgtctca
aactcttacctggcttatgccattagagctgccagcaatggctctgccatggtgcgggtg
ttgagtgtcagcactgctgagcggaccttgctgaagggattcacgggaggtgtggcagac
ctggcctttgctcacctcaactccaaccagctggcctgcctggatgaggctggcaacctt
tttgtctggcgcctggccatggataaagaaaaaatccaagaggagatcttggttaacatc
aagcgacctgacaacacccccctgaacaccttccggagaatcatctggtgccccttcatc
cccgacgacaacgaggagagcggcgaggagggcagccagaccctggcattgctgcacgag
gacagggcagaggtgtgggacttggacatcatccgaaccaacaacagctcctggccggtg
gaagtgcctgatatcaaagaaggcttcattgtggtgaaaggccacagcacgtgcctgagc
gagggagcactttctccagatggaactgtgttggccacagcaagccatgatggttttgta
aaattctggcagatctatattgagggacaggatgagccaaggtgtcttcatgagtggaaa
ccccatgatggtagacctctttcctgcctgctcttttgtgacaaccataaaaaacaagac
ccagaagttcccttctggaggtttctcatcacaggagccgagcagaacagagagctgaag
atgtggtgcacggtgtcctggacctgtctgcagactgttcgcttttctcctgacatcttc
agctccatgaatattcttcccagcctgaaagtctgcctggacctctcagctgagtatctg
atactgagtgatgtgcagagaaaagtcttgtatgtgatggagttgatgcagaaccaagag
gagggcaaggcttacttcagctccatctcagagttcctcctgacccacccagtgctgagc
tttggcatccaggccgtgagccgctgccggctgcggcacaccgaggtgctcccagcagaa
gaggaaaccgacaacttgagtgtagaaggtgctcagggctctggggctgttgaatcagca
gcaggtgtgctgataaaactcttctgtgttcacaccaaggccctacaggatgtgcagatt
agattccagcctcttcacagccctgacacaagtgcttccatgcctgcccatggctctcat
gaagaatttgcctttccagaccacatggctgatctgggcacggaggggctgggctctgag
aaggagtctgtgcacggctcccagccagacctgcggcgcatcgcggatctgcccgtgcca
gcagatttcctctccctctccagtgatgccaaacccaagctgatgactccagatgcattc
atgacaccaagtacttctcttcaacagattgctgtctctccaggcagcagtgtcagttcc
ctgactgcagtcacagccatgagcagcacttctgtcacggatgcctctctgcccagagct
tcagaagacctgactgtgagccccaagatgcagctggacaccagcctcacgctgagcagc
agcagcagcagtctccagaccagtcctaggagtcactctgttcttatcccaggcctccct
gacaagcttacaccaaaggcacctgttccagtggcaccaggaaactcctctctagcactg
gaactgcaggaagtggagcccttggtggtgccccaggcttctcccacccgtgagcgctcc
ccagacgtcatttcctctgcttccacagccatgtcccaggatatcccagagattgcttcc
gagaccctgcagcgcagcttcgcggcggcggcgcccgcgctgcccggggaggggctggag
cccgggcaccacgcagacagcatggcctcagctgcctctgccctgcacctgctgtctccc
aggaaccgccacaactccgagcacagccaccactctttggacatgcctccagtggaggtg
gacagactgaatgctccatcattactggagactgctttaactcaggaaaatgcatcttct
gacagtgttgtgagtcagccctggccggctgctcctgacataacccgggaaaccaggaac
agcatggcagacagcccaagggatgaagttgaagaaaagcacaagagctcttcctaccat
cgacacagctaccaccttctgcagcatgacagccaggatgccagtgcagaacaaagtgac
cacgatgatgaagttgcaagcttggcttccacgtcaggtggatttggtgccaaggcatca
gcacagaggctgcctgtgaaggactggaaagtcaaggcatccccccgggcctccccaaag
ctgaagaggaagggcaagaaggatgatggggatatgaaccagtcaccaagatcatctaac
aaccaggtgacagcagagttccaggaggaagtgatgtgcatcctgaggagccagcagcgg
gagctctccgagctgcggcagacgcagatggagctgctgcagaggctcacggatcacctc
gacgccatccagagctccctcatgggccacatggagagggtcatcgactcccagcaggag
caggagcagagaaggctggagcgggtgctgctggaggggcagcagcgcaatgggcagctc
caggagcagctgtcccagcagctctcgcagtcgctgtccacggccgtgtgtaaccgcctg
gagaggaccatccgtgaggagatgaagaaaacagtgccccagtgcatttccaagagcatg
gaccctactgtcagccagctcagtaatactattgctaccaagctcactgctgttgagggg
acactgaaagagaatattaccaagctagtgaaatcaaagaaccttacagacagtgttgtg
agggccacagctgacactctgcagggacccatccagtcagcctacagggaggccttccag
agcgtcgtgctgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgac
accttcaagcagggcacacaggaatacatccagcagctggaggctcacctgaagaacaag
aaggtgcgggagcaggaggtgcgggagccgctgctggggcagctgcggcagctgatcagc
gccctgcagagcagcacggagcagctggcctccagcatcgccgccagcgtccacgccgag
ctgcagcaccagctccacctcatcgtgggcaacatgcaggagtctattttggcccaggtg
cagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaggcagctgtcacc
tcgagcattgtccaggcaatgcgctcggcagccgggacacccatcccctctactcacatg
gatttccagtcccagcagactcacatccttcagctgctccagcagggacacctcaaccaa
gctttccagcaggctctaacagcagctgatctcaacctggttctctatgtctgtgagact
gtggatactcagcaagtatttggacagcatccatgcccactgtcccagcctgtgctgctc
tccctcattcagcaactctcctcagatctgggcactcgtacagaactgaagttgaactac
ttggaggatgcagtgatgcaccttgaccaaagcgaccccatcacccgagaccacatgggg
tcagtcatgaaccaggtgcggcaaaagctcttccagttcctccaggtggaaccccacaac
cctctgagcaagcctgcgcgtcgcctcatgatcatgctgcagggcctggtcacccctggc
atgacctag
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