Agelaius tricolor (tricolored blackbird): 139596555
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Entry
139596555 CDS
T10815
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139596555 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atrc01007
]
139596555 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atrc03016
]
139596555 (KARS1)
Enzymes [BR:
atrc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
139596555 (KARS1)
Amino acid related enzymes [BR:
atrc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
139596555 (KARS1)
Transfer RNA biogenesis [BR:
atrc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139596555 (KARS1)
Prokaryotic type
Other AARSs
139596555 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
139596555
NCBI-ProteinID:
XP_071297053
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MASPAPPAAVTACAGVQGRKGGGGGSCGAMMAAAAAARECGVEETESHLSKNELKRRLKA
ERKIAEKEAKQKEQSEKHSNKPSLTSEDNVGTDEESLDPNQYYKIRSHAVQQLKGSSEDP
YPHKFHVDISLSDFIDKYSHLQPGDHLTNITVRVAGRIHAKRASGGKLIFYDLRGEGVKL
QVMANSSLYKSEEEYFRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLP
HLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVI
PGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPE
FTTCEFYMAYADYHDLMEITEKLLSGMVKHITGTYKITYHPDGQDGQAYEIDFTPPFRRI
SMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEV
TCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFED
QAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK
PEDSKKEAQPGEGTSV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccagctccgcccgccgccgtcaccgcctgcgcaggcgtgcaagggcggaag
ggcggaggcggcggcagctgcggggcgatgatggcggcggcggcggcggcgcgcgagtgc
ggcgtggaggagactgagtcgcacctcagcaaaaatgagctgaagagacgtttaaaggct
gagagaaaaatagctgaaaaagaagcaaagcagaaagagcaaagtgaaaagcattcaaat
aagccttccttgacttctgaggataatgttggtactgatgaggagagcttggatccaaat
caatactacaagatccgtagccatgcagtccaacagcttaagggctccagtgaagatccc
tatccccacaagttccatgttgacatatctctctcagattttatagacaagtacagtcac
ctgcagccaggagatcacctgacaaacattaccgtgagagtggcaggtcgaatccatgca
aagcgtgcttctggagggaaactgattttctatgatcttcgtggtgaaggagtcaagctg
caggtcatggcaaattccagcctctacaaatccgaggaagaatatttccgtgttaacagc
aagctgcgtcgtggggacattattggtgtagaggggaatcctgggaaaacaaggaaaggg
gaactgagtattattccttatgaaatcactctcttgtctccatgcctgcatatgttgcct
catcttcattttggcctcaaagataaggaaaccagatatcgtcagagatacttggattta
attcttaatgattatgtgaggcagaaatttataacccgtgcaaagatcatcacttacctt
cgtagctttctagatgagttgggctttcttgaggtagaaactcctatgatgaatgtaatt
ccaggcggagctgtggcaaagccatttatcacataccacaatgaactggatatgaattta
tatatgagaattgctccagaactttaccataagatgttggtggttggtggtctggacaga
gtatatgaaattgggcgtcagttccggaatgaaggaattgatttgactcacaaccctgag
ttcacaacttgtgaattttatatggcttacgcggactaccatgacttaatggaaattaca
gagaagttgctttcagggatggtgaaacatattactgggacttacaagatcacttaccac
ccagatggtcaagatggacaggcgtatgagatagattttactcctcccttccggcgaatt
agcatggtgtatgatctggaaaaggtcctgggagtgaagtttccatcaactgagtgtttt
gaaactgaagaaactcgcaggttctttgataacctttgtgtggagagaaatgttgagtgt
ccacctcccaggacaacagccaggcttcttgacaaattagttggtgaattcctggaagtc
acttgtatcaaccctacattcatctgtgatcacccacaggtcatgagtccacttgccaaa
tggcatcgctctcttccgggactaacagaacgctttgagctctttgtaatgaagaaggaa
gtgtgcaatgcatacacagaacttaatgatcctttccgacagcgtcagctttttgaggat
caggccaaggcaaaagctgcaggtgatgatgaagctatgtttattgatgaaaacttctgc
actgcactggagtacggtcttcctcctacagctggctggggcatgggaattgatcgcttg
accatgttccttacagattccaataacatcaaggaggtgctgctcttccccgccatgaaa
ccggaggacagcaagaaggaagcgcagcccggcgagggcacctctgtgtga
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