Agelaius tricolor (tricolored blackbird): 139596725
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Entry
139596725 CDS
T10815
Symbol
IGDCC4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139596725 (IGDCC4)
Cell adhesion molecules [BR:
atrc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
139596725 (IGDCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Ig_5
Ig_RIMBP2
Interfer-bind
Adeno_E3_CR2
SusE
Motif
Other DBs
NCBI-GeneID:
139596725
NCBI-ProteinID:
XP_071297286
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MRPRRPLLPAPGGAYMALEDLLLCLCFSALAVLAVQGRLSEGDSLELSCSAGPAKVILEP
NQVVILDCNLTPVEQVINITWKKNGFPLVEQEHLHVLPNGSLFISSQAVAKDSKYPERDG
AEGNYSCVSHTSLGTVTSQTAAVRFSTLSRFFQQPESQTVEENGMARFECRIEGLPSPVI
TWEKDHEAVPAEPRFITLPNGVLQIVDVQESDAGIYHCVATNAARKRYSNDATLSVVKGS
QAAGGDVTIVAAPENTTVVAGESVVMECMAAADPTPFVSWIRQDGKSISTDVIVLGRTNL
LIPSSQPHHSGVYVCRANKPQTRQFVTAAAELRILATPSISQAPETISRTRASTARFVCK
AEGEPAPTIHWLKNGKPILSNGRVKVQSSGSLVINQIGLEDAGYYQCVAENSLGMACATA
KLSVIVREGLPSAPKKVSAVSLSSTTVLVSWERPEHNSEQIIGFSLHYQRAVGTDNVEYQ
FAVNNDTTELQVKDLEPNTNYVFYVVAYSQLGASRTSSSIVVQTLEDVPSAAPQLSLSSM
TPGDIRVTWLPPPPELSNGKITKYKIDYCTLKEADQVTSIEVGGNETQITLYSLHPNKVY
KVRIAASTSVGYGAPSEWTQHRTPDRDNQTHVPFAPTELKVRAKMESLLITWQPPANHAQ
ISGYKLYYREVGQEESSDESPLDGAEDESWDVGPIKLKKKVKQYELTRLAPGKLYEVKLV
AFNKHEDGYAAVWKGKTEKAPATAVDPPVQKGPPLPPVQVYAESNSSTSIWLRWKKPDFT
TVKIVNYTVRFSPWGLKNASLVTYYTSSDEDILISGLKPYTRYEFAVQSNGVGIDGPFGS
VVERFTLPDRPSTPPSDLRLHPLNPYAVQVHWCPPVEPNGIIVEYLILYNANNTQPDDMW
TLLTREGNIFSTEVHGLESDTRYFFKMGAKTVVGSGPYSNVKDVHTLREKLSDVLDIHSV
TGIIVGVCLGLLCILFCMCASFRNSKHREALPGLDSQAAGNHTYYHRSRQGLASPSATLD
SHELESLMSPLPEDAPVPLGDITELAEVHSLIHTSLPEDIFHGKRKSSWNKSMNQAWTNS
ITRYGDTITKEPLSAVNGSLKLPSSTGQKLLLQALVYDAVMNEAKKSHLPANIHQVEAEV
IVHSDFSASDRDYNSQLHTLESEETEIEDREPEELPSAELANPSSQQDTGQVLVDCMDNL
EAQAQAELLCTDTKTDKPEAVCIHGLTNGFHRHGESLDSEESGDSDSTQEGRGDVQPVKC
QLLSPAPEEALLCSNSGLTSPSSASENMAHVHNHKE
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgcggcggcccctgctcccggcgcccggcggggcttacatggcgctggaggac
ctgctgctttgtctctgcttctccgccctcgctgtcctggccgtgcaagggaggctgtcg
gaaggggattctctggagctgagctgtagtgctggtcctgcaaaggtgatattggagcca
aaccaagtggtgattttggactgtaacctgacccctgttgagcaagtgatcaatatcaca
tggaagaagaatgggtttccattagtggagcaagaacatctccatgtgcttccaaatgga
tctctcttcatctcatcccaggctgtggcaaaggacagtaaatatcctgagagggatggt
gctgagggcaattactcctgtgtgtctcacacctccctagggactgtcaccagtcaaaca
gctgcagtcagattttcaacattatcacgctttttccagcagccggagtcgcagacagtg
gaagaaaatggcatggcccggtttgagtgccggatcgaggggctgccctcccctgtcatc
acctgggagaaggaccatgaagctgttccagcagaacccaggtttataactcttcccaat
ggtgtcctccaaatcgtggatgtgcaggagagcgatgctgggatttaccactgcgtggca
accaacgccgcccgaaagcgctacagcaacgatgccaccctcagtgtggtgaaaggttcc
caggcagcaggaggagatgtcaccatcgttgctgctccggagaacaccacggtggtggct
ggggagagcgtggtgatggagtgcatggcagctgctgatcccaccccctttgtctcctgg
atacgacaagatggaaagtccatttccacagatgtgattgtgctgggccggacaaatctc
ctcattccttccagccagccccatcactccggggtgtacgtctgccgagccaacaaaccc
caaacccggcagttcgttaccgccgcagctgagctccgcatcctcgctacccccagcatc
tcccaggctcctgaaaccatctcccgcacccgagccagcacggccaggtttgtgtgcaag
gcagagggagagccagcccccacgatccactggctgaagaacgggaagcccatcctctcc
aacgggcgcgtgaaggtgcagagcagcggcagcctcgtcatcaaccagatcggcctggag
gatgctggctactaccagtgtgtggctgagaacagcctgggcatggcctgcgccaccgcc
aagctctcggtgatcgtgcgggagggtttgcccagcgctcccaagaaggtctcggccgtg
tccctctccagcaccaccgtcctcgtgtcctgggagcggccggagcacaacagcgagcag
atcatcggcttctccttgcactaccagcgggctgtgggaacagataatgtggaataccag
tttgctgtcaataatgacacaactgagctgcaagtcaaggatctggaaccaaacaccaac
tatgtcttctatgtggttgcatattcccagctcggagccagccggacgtcctcttccatc
gttgtccagaccctggaggatgttcccagtgcagcccctcagctgtccctgtcgagcatg
actcctggtgacatccgtgtgacgtggctgcctcctcctcccgagctgagtaatggcaag
ataaccaagtacaagatcgactactgcaccctcaaggaagcagatcaggtcacctccatc
gaagtgggtggaaatgagacccagatcaccctgtactcactccatcccaacaaagtgtac
aaagttcggatcgcagccagcaccagtgtgggatatggggccccttccgagtggacccag
catcggactcctgacagagacaaccagacacatgttccatttgccccgacagaattaaag
gtccgagcgaagatggagtctcttctgataacgtggcagcccccagcaaaccatgcccag
atatctggctacaagctctactacagagaggtgggccaagaggagtccagtgatgagagc
cctttggatggtgctgaagatgagagctgggatgtaggacccataaaactaaagaagaaa
gtgaagcagtatgagctgactcgactagctcctgggaaactgtatgaggtgaagctggtg
gcattcaataagcacgaagatgggtacgcagcggtctggaagggcaaaacagaaaaggca
cctgcgacagcagtagatccccctgtgcagaaggggcctccactgcctccagtccaagtc
tatgcggagtccaacagctcaacttccatctggctccgctggaagaaacctgacttcaca
acagtcaaaattgtcaactacaccgtgcgcttcagcccctggggcctgaaaaacgcctct
cttgtgacatactacaccagctcagatgaagacattctcatcagtgggctgaagccctac
accaggtatgagtttgctgtgcagtccaacggcgttggcatcgatgggcccttcggcagc
gtggtggagcgcttcaccctgcccgaccggccctccactcctccgtctgacctgcggctg
caccctctcaacccctacgctgtccaggtgcactggtgcccacctgtggagcccaatggc
atcattgtggagtatctcatcctgtacaatgccaacaacacgcagccagatgacatgtgg
accttgctgacacgagaaggaaacatcttcagcactgaagtgcatggcctggaaagtgat
accagatacttcttcaagatgggcgcaaagacagtggtgggatctggtccctattccaac
gtgaaggatgtgcacaccctccgggagaagctgtctgatgtcctggatatccactctgtg
acagggatcatcgtgggggtgtgcctggggctgctctgcattctcttctgcatgtgtgcc
agcttccgcaacagcaagcacagggaggccctgccaggcctggattcccaggctgctggc
aaccacacatactaccaccggagcaggcaagggttggcctctcccagtgccaccttggac
tcacatgagctcgagtccctcatgtccccactccctgaggatgcgcccgtgcccctgggg
gacatcactgagctggcagaagtgcacagcctcatccacacgagcctccctgaggacatc
ttccatgggaagaggaagtcttcatggaataaatcaatgaaccaggcctggacaaacagc
atcaccagatatggggacaccatcaccaaagagcctctctctgctgtcaatgggtcactg
aagctcccttccagcacggggcagaagcttctcttacaagccctggtttatgatgctgtg
atgaatgaagcaaagaaaagccacctgccagccaacatccaccaagtagaagcagaagtc
atcgtccattctgatttttcagcctctgacagagactacaactcccagctgcacaccctg
gagagtgaagagacagaaatcgaggaccgggagccagaggagctcccctcagcagagctg
gctaatcccagttcccagcaggacactggccaagtgctggtggactgcatggacaatctg
gaggctcaggcccaggctgagctgctctgtaccgacacaaagactgacaaacctgaggct
gtgtgcatccatgggctcacgaatggcttccacaggcatggagaaagtctggattcggag
gagagtggagattcagattccacccaggaaggcaggggtgatgtgcagccagtcaagtgc
cagttgctttccccggcacctgaggaggccctgctctgtagtaactctggtttaaccagt
ccttcctcagcatctgagaacatggcacatgtccacaatcacaaagaatga
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