Agelaius tricolor (tricolored blackbird): 139596882
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Entry
139596882 CDS
T10815
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139596882 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139596882 (MYO5C)
04131 Membrane trafficking [BR:
atrc04131
]
139596882 (MYO5C)
03029 Mitochondrial biogenesis [BR:
atrc03029
]
139596882 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atrc04812
]
139596882 (MYO5C)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139596882 (MYO5C)
mRNA cycle factors
P-body specific factors
139596882 (MYO5C)
Membrane trafficking [BR:
atrc04131
]
Others
Actin-binding proteins
Myosins
139596882 (MYO5C)
Mitochondrial biogenesis [BR:
atrc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139596882 (MYO5C)
Cytoskeleton proteins [BR:
atrc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139596882 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
139596882
NCBI-ProteinID:
XP_071297650
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDSFLHLQLEDGTDLSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKRDFQMDVFKMLAAILHLGNVEIAAVGDERSSISMEDKHLSIFCE
LLDLNCDKMARWLCHRKIVTTSETVVKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSISPF
SSTINIKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKTV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDRLRQACTLLQRRVRGWLQRRRFVALR
RAALTVQQYYRGQRTVRQAITARNLKETWAAIIIQKYCRGYLVRRLCQLILVAAVTIQAY
TRGFLARKKYRKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKRIEE
QSRENHGLLERLTNLASAHMNDVDTIQKLESELEKLTAQKRTYEEKGKKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKIQLQQQIQQEIIIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTIKLKEMSNRLHYELERDRTQRRTT
EAQNEVDIKEKENLKDTIQGIEGLSNGVMQDEVQGELQSKIKQVTTRLAVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKSEALVPTVPKEYIGMMEYRKEDEERIIQNLILGLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLSFWLS
NTYYFLNCLKQYSGEEEFMKHNTPRQNKNCLKHFDLSEYRQILSDLAIQIYHQFIIVMEN
NIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatacctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagacagttttctccattta
caattagaagatggaactgacctgagttaccctgttgatccagctgctttgccaccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgccctcagttacctgcatgaa
ccagctgttctacacaaccttaaaattcgttttgtggagtctaagcttatctacacatat
agtgggataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcctatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaagaatcagtccattatagtcagc
ggagaatcaggagctggaaagactgtgtctgcaaggtataccatgagatactttgccact
gtgagtaagtcaagcagcaatgctcacgtggaggataaagtactggcatccaatccaata
actgaggctgtgggcaatgcgaaaaccacacggaatgataacagcagtcgatttgggaaa
tacactgaaatcagttttgatcagagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatatgaacatcttaaattggggagtgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactcggtctgaagagggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaaatagcagct
gttggagatgaaagatcatccatcagtatggaagataaacacctcagtatattctgtgag
cttctggatttaaactgtgacaaaatggcccggtggctgtgccacaggaagattgtcacc
acctcggagaccgtggtgaagcccatgacaagggcccaggctgtcaacgccagggatgcc
ctggcaaagaaaatctactcccatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaaacagcacactttcattggtgttttggatatttatggatttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacagtccagtgtccatctcacctttc
agttcaactataaacatcaaatctgccagacctgttctgaaatcacccaacaaacagctc
cggaccactgtgggcagtaagttcaggaattctttgtctttacttatggtgacactcaat
gcaaccactcctcattatgtgagatgcataaagccaaatgatgagaagttgccttttgag
tttgattccaagagagttgctcagcagctgcgagcatgtggtgttttggaaacgattcga
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggagctctccataaatgacaagaaacagatttgcaagactgtt
ttgcagaggctgatccaggatcctaaccagtatcagtttgggagaacaaagatttttttc
agagcggggcaggtggcttacctggagaagctgcgctcggacaggctgcggcaggcgtgc
acgctgctgcagcggcgcgtgcggggctggctgcagcgccggcgcttcgtggccctgcgc
cgcgcggcgctcaccgtgcagcagtactaccgtgggcagcgcaccgtcaggcaagctata
actgcaagaaatctgaaggaaacatgggcagccataatcattcagaaatactgtcggggt
tacctcgtccgtagactttgccagctcatccttgtggctgctgtgacaatccaagcttac
acaagaggatttctagcaagaaaaaagtatcgcaagatgcgtgaggagcagaaggctgtg
gttctccagaaatatgcccgtgcatggctggccaggcgcaggttccagaacattcggcgc
ttcgtgttgaacatccagctctcatacagagttcagcagctgcagaaaaggatagaagaa
cagagtagagaaaatcatggcttgctggaacgattgaccaatctggcttcagctcatatg
aatgatgtggatacaattcagaaacttgaatcagaactcgaaaaattaactgctcaaaag
agaacatatgaagagaaagggaaaaaatataaagaggacagtgagcagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacaaaaggaaaccttagaaataaaactccaa
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcaatgat
gtacaaaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaactgctcaagggagaaataaagatcctgaaagaagaaaaa
attcagctacagcaacaaattcagcaagaaattatcattcaggatggcttaaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatacctgaattgcaaaaggaaattgaactt
cttcagacacagaaattggatgttgaaaagcaggcccactcacagaagagagaattgagg
gaaaagatgtcagaagttacaaagcagcttcttgaaagttacgattttgaagatgtaaga
agcagactctctacagaggatctggagcacttaaatgaggatggagagctgtggtttgct
tatgagggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgagggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacagaaattattccgagaggaaaatgacataaatgatggcattcggttggaa
gttagcaggctaacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtcttcaagagcagaccataaagttgaaa
gagatgtcaaatcggctgcattatgagctggaacgggataggacacagagacgaactact
gaggcccagaatgaagtagacataaaagaaaaagagaatctgaaggacacaatccaagga
attgagggactgagcaatggtgtgatgcaagatgaagtccagggtgaactacaaagcaag
ataaagcaagtgacaactcgacttgctgtggaaaacatggatcttgaagaaaagctagac
atgaaagacagaataataaaaaaattagaagatcagatcaaaactctgaccaagactatt
gaaaaatctgaagcccttgtgcccactgtgcccaaagagtacattggaatgatggagtac
agaaaagaggatgaagaaaggatcattcagaatctgatcctcggtttgaagccccgtgga
gttgtagttaatatgattcctggccttccagctcacatcctgttcatgtgtgtgaggtat
gcagattacctgaacgatgctgacatgctgaagtctttcatgaatgtaaccattgatggc
atcaagcaggttgttaaggaacattcagaagactttgagatgttgtccttttggctctcc
aacacatattattttcttaactgtttgaagcagtacagcggggaagaggaattcatgaag
cataacactccacgtcagaataagaactgtttgaagcattttgatctctcagaatacaga
caaattctcagtgatttggccattcaaatatatcaccaattcattattgtaatggagaac
aacattcagcacatgattgtaccaggcatgctggaatatgaaagtcttcaaggaatttct
ggcctgaaacctacgggattccgtaaacgttcttccagtatagatgacacggatacctac
actatgacctctatcttgcagcagctcagctatttttatagcactatgtgtcagaatggc
ttggactctgagctcctaaagcaggcagtgaagcagcttttctttctgattggagctgtc
accctcaatagtctctttctccgcaaggacatgtgctcctgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcccctgtctcaagcagcctggctccttcaggttaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagatcctgaactcgtacactccaatagatgactttgagaaaagagtgaccccatcg
tttgttcggaaggtccaggctatgctaaacaaccgtgaggatgtcccacagctgatgctt
gataccaagcatctcttccaagtgacgtttcctttcaccccctctccgcatgctttggaa
ctgatacaagtccccagcagcttcaaacttggctttctcacgagggtttaa
DBGET
integrated database retrieval system
