Agelaius tricolor (tricolored blackbird): 139596884
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Entry
139596884 CDS
T10815
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139596884 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139596884 (MYO5A)
04131 Membrane trafficking [BR:
atrc04131
]
139596884 (MYO5A)
03029 Mitochondrial biogenesis [BR:
atrc03029
]
139596884 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atrc04812
]
139596884 (MYO5A)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139596884 (MYO5A)
mRNA cycle factors
P-body specific factors
139596884 (MYO5A)
Membrane trafficking [BR:
atrc04131
]
Others
Actin-binding proteins
Myosins
139596884 (MYO5A)
Mitochondrial biogenesis [BR:
atrc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139596884 (MYO5A)
Cytoskeleton proteins [BR:
atrc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139596884 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Csm1_N
Myosin_N
AAA_16
AAA_22
NPHP3_N
MYO6_lever
Motif
Other DBs
NCBI-GeneID:
139596884
NCBI-ProteinID:
XP_071297652
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYSLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGVD
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCTVPPKHEPLTIF
CDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIRVLKSSKFKLLPELFQDEEKVLS
PTSAAPSGRVPLTRMPVKPAKTRPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDVL
GDRKQTCKNVLEKLIQDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW
LMRKKYMRMRKAAITIQRHVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYQCMRDA
TIALQALLRGYMVRNKYQMMLREHKSVVIQKHVRGWLARRRYGRTLRAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMTTLEVTYTTE
TEKLRGDVERLRLSEEEARSATSRVLSLQEEIAKLRTELHHTQAEKKSIEERADKYKHET
EQLVSELKEQNSLLKTEKEELNRRIHDQAREITESMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKDEMNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRM
EQEPSEKKAALDMSLFLKLQKRVSELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRGA
ELEYESLKRQELESENKKLKNELNELQKALTETRAPEVTAPGAPAYRVLLDQLTSVSEEL
EVRKEEVLILRSQLVSQKEAIQPKHTMTDATILLEDVQKMKDKGEIAQAYIGLKETNRLL
ESQLQSQRKSHENELESLRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLT
NENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRK
EKDFQGMLEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKV
RSLLTSTINGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHC
LTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKR
TSSIADEGTYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKD
MCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICS
MCNALTTAQIVKVLNLYTPVNEFEERVLVSFIRTIQVRLRDRKDSPQLLMDAKHIFPVTF
PFNPSSLALETIQIPASLGLGFISRV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccgagctctacacgaagtatgccagggtttggatccctgatccagaggag
gtgtggaagtcagcagagctcctcaaagattataaacctggagataaagtccttcagctt
cggctggaagagggcaaggacctagagtacagcctcgaccccaagaccaaggagctgccc
cccctgaggaaccctgacatcctggttggtgagaacgacctgacagccctcagctacctg
cacgagcctgcggtcctgcacaacctcaaagtgcgcttcatcgactccaaactcatctac
acctactgtggtattgttttagtggccataaatccttatgagcagctgcctatctatggc
gaagacatcatcaatgcctacagtggccagaacatgggggacatggacccacatatcttt
gcagtggctgaggaggcatacaagcagatggccagggatgagaggaatcagtcaatcatt
gtcagtggggagtctggagctggcaagactgtctctgccaagtatgccatgaggtacttt
gccacggtcagtggatctgccagtgaagccaacgttgaggagaaggtcttggcctccaac
cccatcatggagtctattggaaatgccaaaactaccaggaatgacaacagcagtcgcttt
ggtaaatacattgaaattggttttgataagaggtatcgaatcattggtgctaacatgaga
acttacctcttggaaaagtcaagagtggtgtttcaggcagaagaggagagaaattaccac
atcttttaccagctttgtgcctctgcagcattgcctgagtttaaaactctacgattaggg
aatgcaaattactttcactatacgaagcaaggtggaagccctgtgattgatggtgttgat
gatgctaaggaaatggtgaacaccagacaggcctgcactttgctagggattagtgattcc
taccagatgggaatttttcgaatccttgctggcatccttcacctgggcaacgtggagttt
gcatctcgggattctgacagctgcactgttcctcccaagcatgaacccctcaccatcttc
tgtgacctcatgggtgtggagtatgaggagatggcccactggctttgccataggaagctt
gccactgccactgaaacttacatcaagccaatttccaaacttcacgccatcaatgccaga
gatgcacttgccaaacatatctatgctaacctcttcaactggattgtagatcatgtgaac
aaagcccttcatgccactgtaaaacagcattctttcatcggggtgttggacatctatgga
tttgaaacatttgaaatcaacagctttgaacagttctgtatcaactatgccaatgaaaaa
ctgcagcagcagttcaatatgcatgtctttaagctggaacaagaagaatatatgaaggaa
caaataccatggaccttgattgatttctatgacaatcagccttgcatcaacctcatagag
gccaaaatgggagttctggatctgttggatgaggagtgcaagatgccaaaaggctcagat
gactcttgggcccaaaaactttacaatactcatttgaataaatgtgctctctttgaaaag
ccacgtatgtcaaataaggcctttatcatcaagcactttgctgacaaggtggaatatcag
tgtgaaggctttttggaaaagaataaagacacagtttatgaagaacaaattagggtccta
aaatcaagtaagttcaagctgctgccagagttattccaggatgaggagaaggtgctcagc
cccacatcagcagccccttcagggcgtgtgcctctgactcgaatgcctgtcaaacctgcc
aagaccaggccagggcaagccagcaaggagcacaagaaaactgtgggacatcagtttcga
aactctcttcatctgctgatggaaaccctgaatgccacaactccacactacgtgcgctgc
attaagccaaacgacttcaagttcccattcacgtttgatgagaagcgggcagtgcagcag
ctgagagcctgtggtgtgctggagaccatcaggatcagtgctgctggcttcccctccagg
tggacgtaccaggagttcttcagccgttaccgggttctgatgaagcagagggatgtcctt
ggtgaccgaaagcagacgtgtaaaaatgtcctggagaagctgattcaggacaaggataag
taccagtttggtaagacaaaaatatttttccgggctggtcaagtagcctacctggaaaaa
ataagggcagataagttgagagctgcctgtatccgcatccaaaagacgatccggggctgg
ctgatgaggaagaagtacatgcggatgaggaaggctgccatcaccatccagagacacgtc
agagggtaccaggcacgatgctatgccaagttcctgaggagaacacgagctgccatcacc
atccagaagttccagcgcatgtacgtggtccgcaagagataccagtgcatgcgagatgcc
actattgctctccaggccctcctgagaggctacatggtcagaaacaagtaccaaatgatg
ctgcgggagcacaagtccgtggtcatccagaagcacgtgcggggctggctggcgcggcgg
cgctacggccgcacgctgcgcgccatcgtctacctgcagtgctgctaccgccgcatgatg
gccaagagggagctcaagaagctcaagatagaggcccgctccgtggagcgctacaagaag
ctccacatcggcctggagaacaagatcatgcagctgcagagaaaaattgatgagcagaac
aaagagtacaaatccctgctggagaagatgaccaccctggaggtgacgtacacgacggag
acggagaagttgcgtggtgatgtggagaggctgcggctgagcgaggaggaggccaggagc
gccaccagccgcgtgctcagcctgcaggaggagatcgccaagctccgcacggagctgcac
cacacgcaggccgagaagaagagcattgaggagcgcgcagacaaatacaaacatgagact
gagcagctggtgtcagagctgaaagagcagaactcattactgaaaacagaaaaggaggag
ctgaaccgccgcatccatgaccaggccagggaaataacagagtcgatggagaagaagctg
gtggaggagacgaagcagctggagctggatctgaacgacgagcggctgcggtaccagaac
ctgctcaatgagttcagccgcctggaggagcgctacgacgacctcaaggatgagatgaac
ctgatggtgagcatccccaagcctgggcacaaaagaacggactcaactcacagtagcaat
gaatctgaatatactttcagctctgagatcacagaagcagaagatttaccactcaggatg
gagcaggagcctagtgagaaaaaagcagcgctggacatgtctctgttcctcaagctgcag
aaacgggtttcagaactggagcaggaaaagcagtccctgcaggatgaactggacagaaag
gaggagcaggctctccgtgctaaagctaaggaggaagaaaggcctcccataagaggtgca
gagttggagtatgagtccctcaagcgccaagagcttgaatctgagaataaaaaactgaag
aacgagttgaatgagctgcagaaggccctcacagagacacgagctccagaggtgactgct
cctggtgccccagcatacagagtcctactggaccagctgacctcggtcagcgaagagctg
gaagtacgcaaggaagaagttctcatcctgaggtctcagcttgtgagccagaaagaggca
attcagcccaagcatacaatgacagatgccacaatcctcttggaggatgtacagaagatg
aaagacaaaggagaaatagcacaggcatatattggactgaaggaaacaaacaggctgctg
gagtctcagcttcagtctcagaggaagagccacgagaacgagctggaatctctgcgaggc
gagatccagagcctgaaggaggagaacaacaggcagcagcagctgctggcccagaacctg
cagctgcctcccgaggcgcgcatcgaggccagcctgcagcacgagatcacccggctgacc
aacgagaacctggatttaatggagcagctggaaaagcaggacaaaactgttcgcaagtta
aagaagcagctgaaagtgtttgctaagaagatcggtgaactcgaagtgggccagatggag
aacatatcacctggacaaatcattgatgaacctattcgtccagttaacattccacggaaa
gaaaaggacttccaagggatgttggaatacaagaaggaggatgaacaaaaacttgtcaag
aatcttattttagagctgaaaccacgtggggtagctgtcaacctgattccaggactccca
gcatatattttgttcatgtgtgtgcgccatgcagattacctcaacgatgaccagaaagtg
cggtcgttgttgacttccactatcaatggcatcaaaaaagtcttaaagaaaagaggagat
gactttgaaacagtgtccttctggctgtcaaacacctgccgattcttgcactgtttgaag
cagtacagtggagaagaggggtttatgaagcataatacacctcgtcagaatgaacactgc
ctcactaattttgatttagctgaatacagacaagttctgagtgacttggctattcagatc
taccaacaacttgtccgagtgttggaaaatattctgcaaccaatgattgtttcaggaatg
ctggagcacgagaccatccagggtgtgtcaggggtgaagcccacggggctgcgcaagaga
acgtccagcattgctgacgagggcacctacaccttggactccatcatcaggcagctgaac
tccttccactcggtgatgtgccagcatggcatggacccagagctgatcaaacaggtggtc
aagcagatgttctacatcattggggctgtaacactcaacaacctcctcctgcgcaaggac
atgtgctcctggagcaaaggaatgcagataagatacaatgtgagtcaactggaagaatgg
ctacgtgataaaaatttgatgaatagtggggctaaggaaaccctggaacccctcatccag
gctgcacagttgttgcaagtaaaaaagaaaacagatgaagatgcagaagccatatgttca
atgtgcaatgcactgaccactgcccagattgtaaaagtcctgaatttgtatactccagtt
aatgaatttgaagagagagtcttggtgtcatttatacgtacaatacaggtgcgtctgcgg
gacaggaaggactctcctcagttgctcatggatgccaaacacatcttccctgttactttc
cccttcaatccatcctctctggctttagaaaccattcagatcccagccagtttgggcctg
ggcttcatatcacgcgtgtga
DBGET
integrated database retrieval system
