Agelaius tricolor (tricolored blackbird): 139596895
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Entry
139596895 CDS
T10815
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04120
Ubiquitin mediated proteolysis
atrc04144
Endocytosis
atrc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139596895 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139596895 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
139596895 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139596895 (NEDD4)
04121 Ubiquitin system [BR:
atrc04121
]
139596895 (NEDD4)
03029 Mitochondrial biogenesis [BR:
atrc03029
]
139596895 (NEDD4)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139596895 (NEDD4)
Membrane trafficking [BR:
atrc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139596895 (NEDD4)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
HECT type E3
139596895 (NEDD4)
Mitochondrial biogenesis [BR:
atrc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
139596895 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
139596895
NCBI-ProteinID:
XP_071297685
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MARRLRLHFATQRSNTDPLSETSEDFLDRNNCMYFKKSQSSAPSFTQVKLIPRQAAYAPV
VQQVINPEKSTTISSLQIKKSSSLHISLQSRKQSGCSRFGDAVAAGEDTSFIGVGSEGSC
GAGAVSDHRSNDSLLSSAALGRGSLSSIAASDSGSFSSAGSDYGSCASTTSDGGSYSNSV
ISDSGSGTLWTSDSTFCGSVAHGDSSYRSTGNKCNPSRSTSSQETLYRSNTTFDQDALSV
RKKTKIPLRRCSSLVIFPRSPSSTPPASPVSSGQPPHRGTYQTSHKLIISPSELAQKEDQ
TISKGFLSTAVNGLRLSKTVCSSGEVRDIRPLYLNASLQDKSQILSGPQQATCEEVPDGF
PCVSVHLKQRAFASSSEMVNGSCSPELNLHSGTKYPHLKLERSTSACLPSKTDSEYQINI
NEPGRPNAQMSKAPHILQRSVSLEGSRQKVSCCLSSLKYKCHSARTSQLHIQFNAGNEGK
TTGVRKRYGTSKREMSSTLWRPQKTRDDFLGQVDIPLYQLPTENPSMERPYTFKDFVLHP
RSHKSRVKGHLRLKMTYLPKNNGSEEETTEQAEELEPGWIILDQPEAASQPQQQQQESPP
LPSGWEERQDILGRTYYVNHEFRRTQWKRPTAQDSVAAADLGSVQLEAQHVFTHRRQISE
DTESTDNRDSPESWEIITEDEATMYSSQNVQIPLSQSSCDIQSHLAEELSNRLTTSGSPA
TGQSTAYANHSSRRGSLQTYRLEEQPAHPVLLPTSSGLPPGWEERQDEKGRSYYIDHNSR
TTTWIKPVVQMAAETSQASPASSISVARQPQATSSDSSQESSQQQPEMEQGFLPKGWEVR
HAPNGRPFFIDHNTKTTTWEDPRLKISAHPRRKTSLDPVDLGPLPPGWEERTHTDGRIFF
INHNTKRTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMKIHRTT
ILEDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYS
ATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITL
HDMESVDSEYYNSLRWILENDPTELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKNKRD
YIHLVIQWRFVSRVQKQMTAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVADWKLH
TKYKNGYNINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFT
VEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacggttaagattgcattttgctacccaaagaagcaacacagacccattatca
gagacctctgaagattttttggataggaataattgtatgtacttcaaaaaatcgcagagt
tctgcacctagctttacacaagtgaaactaattcctagacaagctgcttatgcacctgta
gtgcaacaagtaattaatccagagaaaagcacaactatttcttcactgcaaataaaaaag
agcagttcactgcacatttccttgcagtctaggaagcagagtggatgttctaggtttggt
gatgccgtggctgctggtgaagacacttcattcattggtgttggtagcgaagggagctgc
ggtgctggagccgtgtctgaccatcgatctaatgacagccttctgagcagtgctgctctg
ggcagaggcagcctcagcagcattgcagcaagtgacagtggctcgttcagcagtgctggc
agtgactacggatcatgtgcaagtaccacaagtgatggaggttcatattctaacagtgtc
atcagtgacagtggcagtggcactctttggacaagtgacagtactttctgtggtagtgtt
gcacatggtgactcttcatatagaagcactggaaacaaatgtaacccctccaggagcacc
tcatctcaggaaacactgtacagaagtaatactacttttgaccaagatgctttgtcagtg
aggaagaaaactaaaattccattgcgacgttgttcatcactggttatttttcctaggagt
ccttccagtactcctccagcttctccagtaagctccggtcagccaccacacagaggcacc
tatcaaacatctcataaattaattatttctcctagtgagctggcacaaaaagaagatcag
accatttccaagggattcctttcaacagcagtcaatggacttagactgtctaaaacagtt
tgctcttctggcgaggtcagagacatccgcccactttatttgaatgcatcattacaggac
aaaagtcaaattttgagtggtcctcagcaggcaacttgtgaagaagtacctgatggcttc
ccatgtgtttcagttcatcttaaacaaagagcatttgcatcaagcagtgaaatggttaat
ggctcttgcagtccagagttaaatctgcactctggtacaaaataccctcatttaaaactg
gagcgtagcacatctgcatgtctgccctcaaaaacagattccgaatatcagattaatatc
aatgaaccaggaagaccgaatgcacagatgagcaaagctccccatattttacagagaagt
gtttccttggaaggatcacgccaaaaagtttcttgctgcttatccagccttaaatacaag
tgtcatagtgcgaggacgtctcagttgcacatacagttcaatgctgggaatgaaggaaaa
acaactggtgttaggaaaagatatggaacctctaaaagggaaatgtctagcactttgtgg
aggccccagaagactcgagatgattttcttggacaagtggatattcctctttatcagtta
ccgacagaaaatccaagtatggagagaccatatacatttaaggatttcgttcttcatcca
agaagccataaatcaagagtcaaaggccaccttagattaaaaatgacttacttacctaaa
aacaatgggtctgaagaagaaaccacagaacaggctgaagaattagagcctgggtggatt
atattggaccaaccagaggctgctagccagccacaacagcagcagcaggaatctcctcca
ctgccttcaggctgggaagagagacaagacatcctcggcaggacctactatgtcaatcat
gagttcagaagaacacagtggaaaagaccaactgcacaggacagcgtggctgctgcagac
ctgggcagtgtgcagctggaggcccagcacgtgttcactcaccggcgacagatatccgag
gatacggagagcaccgacaacagagattcccctgagagctgggaaattataactgaagat
gaggcaacaatgtacagcagtcagaatgttcaaatacctctctcgcagagtagctgtgat
atacagagtcatcttgcagaagaattgagtaacagacttactacctctggaagtccagct
actggccagtcaacagcctacgctaaccattccagcagaagaggtagtctgcagacatac
agacttgaagagcagcctgcacatccagtgttactgcctacttcatctggattaccccca
ggctgggaagaacgacaagatgaaaaaggaaggtcatattatatagatcacaattctaga
accactacctggataaaaccagttgtacagatggctgcagaaacaagtcaggcatcacct
gcatcaagtatttctgtagcaagacagccacaggcaacatcaagtgattcatcacaagag
tcttctcagcagcagcctgaaatggagcaaggatttctccctaaaggctgggaagtccga
catgcacccaatgggagaccattctttattgaccacaacaccaagactacaacatgggaa
gatccaagactgaaaatttctgctcatccaaggagaaagacttccctagatccagttgac
ctgggcccattaccaccagggtgggaagagagaactcacacagatggaagaatattcttc
ataaaccacaataccaagagaacccaatgggaggatcctcgactgcagaatgtggcaata
actggaccagctgtgccttactccagggactataagcggaagtatgaatttttcagaaag
aaattgaagaaacagagtgatattccaaataggtttgaaatgaaaattcatcgcacaaca
atccttgaagattcttacagaagaatcatagctgtaaagagagcagatttccttaaagca
agactttggattgaatttgatggtgaaaaaggtttagactatggaggagttgccagggaa
tggttcttccttctctctaaagaaatgtttaatccttattatggattgtttgaatattca
gctacagataactatactctgcagatcaatccgaactctgggctttgcaatgaagatcat
ctctcttatttcaagtttataggtcgtgtggctggaatggctgtttaccatggcaaactt
ttggatgccttttttattcgtcctttttacaagatgatgctccaaaaaccaataacacta
catgatatggagtctgtggatagtgaatattacaattctctgagatggattcttgaaaat
gatccaacagaactggacctcagattcatagttgatgaagaactttttggtcagacccat
caacatgaactgaaaagtggtggatcagaaatagttgtcaccaacaagaacaagagagac
tacattcatcttgtaattcagtggagatttgtgagccgagtacagaaacaaatgacagcc
tttaaagagggcttttttgagctaataccacaggatctgattaaaatttttgatgaaaat
gagctagagttattaatgtgtggattgggagatgtggacgtggctgattggaaactacac
acaaaatacaaaaatggttacaacataaaccatcaagtaatacagtggttctggaaggca
gtcttaatgatggactctgaaaagagaataagattacttcagtttgttactggcacatca
cgtgttcctatgaatgggtttgctgagctgtatggttcaaatggaccacagttgttcaca
gttgaacagtggggtacccctgaaaaactgccgagagctcatacctgctttaatcgcttg
gatttgcctccatatgactcgtttgaagatttatgggataaacttcttctagcgattgaa
aacactcagggttttgatggggttgattaa
DBGET
integrated database retrieval system
