Agelaius tricolor (tricolored blackbird): 139596922
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Entry
139596922 CDS
T10815
Symbol
LRRC49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
atrc03037
]
139596922 (LRRC49)
04812 Cytoskeleton proteins [BR:
atrc04812
]
139596922 (LRRC49)
Cilium and associated proteins [BR:
atrc03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
139596922 (LRRC49)
Cytoskeleton proteins [BR:
atrc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
139596922 (LRRC49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
139596922
NCBI-ProteinID:
XP_071297763
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MVPSKGRPGRGPRAAPSAVNNCGLQLVIQTSSIPEKTKPFEFRINKEQSSFHNRLLQHDL
EKNYSGRQDNTNFGSSSSITFPVLQRTAEEKILNSDRLTLERQKLTVCPIIDGEDHLRLL
NFQHNFITRIQNISNLHHLVFLDLYDNQIEEISGVSTLRSLRVLLLGKNRIKKISNLENL
KNLDVLDLHGNQIAKIENIGHLSELRVLNLARNLLTVVENLNGLDSLTELNLRHNQVSAI
KDVDTLPCLQRLFLSFNNISSFEDILCLADSSSLSDITLDGNPIAQETWYKHTVLHHMMQ
LRQLDMKRITEEERRMASIAARKEEERKRESHRQTLLKEKKRLTIGNIARQWEIQQNQLA
LEASLNKDKENEPCQINGSAAYVFPEESRSLDTILSSAVQGLSVLESHLVEVEGDTLGLY
GSGALECLDRNWSVQTAGIIATVSFMFIEFDEIVQVLAKLKTKFPNCVHLKFKETNLVAL
QQFNALAEMHRMEQLTVDPQGNPVVNFTLWKYYVLFRLNHFNLQKINGEKVTENDIVKAE
RLFGILAYVASSELPHYRMLSLFGESRRKQFHYLLEGKGKKSGVGSEESGDNRRSGGEST
ARATLNYMTKDFHMEKLEEIKERKTFCQTYVENLVKEAADINMKNESLQKLWPQLFIELV
RDAVLEIRNKNSYMKLCLQRITEQKQYYKEVLCAKKRLNAA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcaagggccggcccggccggggcccgcgggccgcgccctcagcggttaat
aattgtggtctccagctggtcatccagacctcatcaataccagaaaaaaccaaaccattt
gaattcagaataaataaagagcagtcatctttccacaataggcttctgcagcatgatctg
gaaaaaaactactcgggaagacaagataacacgaattttgggagcagttcatcaataaca
tttcctgtattgcaacgtactgctgaagaaaaaatcctgaactcagacagacttaccctg
gaaaggcaaaaactgacagtgtgcccaattatcgatggggaagatcatcttcgtcttttg
aatttccagcataactttataactcgtatccaaaatatttctaatcttcaccatcttgtt
ttcttagatttatatgataatcagattgaagagataagtggggtttcaactttgagatcc
ctgagagtccttctgttgggaaagaacagaataaagaagatctcaaatctggagaaccta
aaaaaccttgatgttttagatcttcatggaaatcagattgctaaaatagaaaacattggt
catttaagtgaactgagggtgttaaaccttgccagaaacctcctcactgttgtagaaaac
ctgaatgggctggattcactcacagagctcaacctccgtcacaatcaagtctctgctata
aaagatgtggatactttgccctgtctccagcgtctcttcctcagcttcaacaatatatct
agttttgaggatattctgtgccttgctgattcctcatccttgtcagatatcacccttgat
ggcaatccaatagctcaggagacatggtacaaacacactgttctccatcatatgatgcag
ctccgacagctagatatgaagagaatcacagaagaagaaagacgtatggcatctattgca
gccaggaaagaggaagagaggaagcgtgaaagccacagacagaccttgcttaaggaaaag
aagcggttaacgatcggtaacatcgctcggcaatgggagatccagcagaaccaactcgct
cttgaggcttctttaaacaaagataaagaaaatgagccctgccagatcaatggcagtgct
gcatatgtgtttcctgaagaaagcagatctcttgataccatcctgagcagtgcagtacaa
ggcttgtctgttctggagtctcatttagtggaggtggaaggagacactcttggcttgtat
ggctctggggcactggagtgcctggatcgaaactggagtgttcaaacagctggcattatt
gccacagtctccttcatgttcatagaatttgatgaaattgttcaagtgctagcaaaactg
aagacaaaattccctaactgtgtgcacctgaagtttaaggagacaaatcttgtggcgctg
cagcagtttaatgccttggctgagatgcatcgcatggaacagctgacagttgatcctcag
ggaaatccagttgtcaacttcactttgtggaaatactatgttctcttcagactgaaccat
tttaatctgcagaagataaatggagagaaggttactgaaaatgacattgtaaaggcagaa
aggctctttggcatcctggcatatgtggcatcttcagagctgcctcattaccgcatgctt
tcattatttggagaatccaggaggaagcaattccattatctgctggagggaaagggaaag
aaatctggggttgggagtgaggaaagtggtgataacagaagaagtggaggggaaagcaca
gctcgagcaacgctgaattacatgacaaaagattttcatatggaaaagcttgaggaaatc
aaagaaagaaaaacattttgccagacatacgttgagaacttagtgaaagaagcagctgac
atcaatatgaagaatgaatccttgcagaagctctggcctcagctgttcattgagcttgtc
cgagatgcagtgctggaaatccgcaataaaaactcctacatgaaactctgcctccagagg
atcactgagcagaaacaatactataaagaagtactgtgtgcaaagaaaagacttaatgct
gcatga
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