Agelaius tricolor (tricolored blackbird): 139596951
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Entry
139596951 CDS
T10815
Symbol
CHRNA5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139596951 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139596951 (CHRNA5)
Ion channels [BR:
atrc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139596951 (CHRNA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
139596951
NCBI-ProteinID:
XP_071297860
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MAGRGAWPCCGRPPAVLLLTWLCAPLLGQPGASHAAVSEPSFIAKSEDRLFKHLFEDYQR
WVRPVERLNDTIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITS
IRVPSDSIWIPDIVLYDNADGRFEGTSTKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFD
LQNCSMKFGSWTYDGSQVDLILEDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPFV
TYSFIIRRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIE
EIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKL
PKLLCMRSHVDRYFAQKEETATVNGSESSRNTLEAALDSIRYITRHVMKENEVREVVEDW
KYIAQVLDRMFLWAFLLVSIIGSLVLFIPVIHKWASIIVPTHIGSTNA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcgcggagcgtggccgtgctgcggccgccctccggccgtgctcctcctcacc
tggctctgcgcgcccctgctcggccagcccggagcctcacacgcggctgtatctgaacct
tcttttattgctaaaagtgaagatcgtttgtttaagcatttatttgaagactatcaaaga
tgggttcgtccagtggaacgtttgaatgacacaataaaaatcaagtttggccttgcaatc
tctcagctagtagatgtggatgaaaaaaatcaattgatgacaacaaatgtatggttgaaa
caggaatggatagatgtgaaattgaggtggaatcctgaagactatgcaggaataacatca
atccgtgtgccatcagattctatttggattccagatattgtgctgtatgacaatgcagat
ggacgttttgagggaacatctacaaaaaccgtggtaaaatatgatggcaccattgcttgg
actccaccagcaaactacaaaagttcttgtaccattgatgtaacattcttcccctttgac
cttcaaaattgctcaatgaaatttggttcctggacttatgatggctcacaggttgatcta
attcttgaagattatgatgttgacaaaagagatttttttgataacggagaatgggaaata
gtgactgcaacagggagcaaaggaaacaggactgatggatgctgctggtatccttttgtt
acctattcatttataattagacgtttgccacttttttacactttgtttctcattattcct
tgtattgggctttcatttctaactgtccttgtcttctatcttccttcaaatgaaggtgaa
aaaatttcactctgcacttcagtactggtatctttgactgtttttcttcttgttattgaa
gaaattattccatcatcttctaaagttatccctctcataggagagtacctggtgttcaca
atgatatttgtgaccttgtccattgtgatcactgtctttgccatcaacatccaccaccgc
tcctcgtccacacacaacgccatggcgccctgggttcgcaagatcttcctgcacaagctg
cccaagctgctctgcatgagaagccatgtggataggtactttgctcagaaggaggaaaca
gccactgtgaatggatcagaatcatccaggaacaccttggaagcagctctggattccatc
cgttatatcacgaggcacgtgatgaaggagaatgaggtccgtgaggttgttgaagactgg
aaatacattgctcaggtgcttgatcgaatgttcttatgggcttttcttctggtttcaata
attggatcacttgtgttatttattcctgttattcataaatgggcaagtataatagtccct
acccatataggcagtacaaatgcataa
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