Agelaius tricolor (tricolored blackbird): 139597012
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Entry
139597012 CDS
T10815
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04350
TGF-beta signaling pathway
atrc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139597012 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139597012 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139597012 (NEO1)
Cell adhesion molecules [BR:
atrc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
139597012 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Tissue_fac
C2-set_2
TMEM154
TM_ErbB1
EphA2_TM
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
139597012
NCBI-ProteinID:
XP_071298002
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MAARRARRLLGSLCIALLFAQLAPTGAAARSGSRSLLTESLVRTFTPFYFLVEPLDVLAV
RGMSVIMNCSAQCETPPRIEWRKDGSFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEG
YYQCVATVDSLGTIVSRTAKLTVAGLPRFTSQPEPTWVRRGGSAVLGCEVTAELAPLLRW
ERERQALPPEPRLLQLPGGALLLSNASDSDAGLYRCLLDTPGTPKYSDEAELRVLPDAEE
PQKLALLKPPSSLSRLAGQSALFPCVAAAFPPPLVRWTRNGEELPSDGSGRFQLLPGGVL
EIRDVTEADAGTFTCIAESGNDTLEAQAELAVQVAPTFLKRPANIYAHESMDIVFECEVT
GKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQL
IILDLDVAIPTLPPTSLTSATNDHLAAAPAGPLPSAPRDVVATLVSTRFIRLTWRPPASD
PHGDNLTYSIFYTKEGINRERVENTSRPGETQVMIQSLMPETVYVFRVVAQSRHGPGESS
APLKVATQPEVQLPGPAPNIRAFSSSPTSVTVTWETPLSGNGDIQNYKLYYMEKGQHTEQ
DVDVAGLSHTVAGLKKFTEYSFRVVAYNKHGPGVSTHDVVVRTLSDVPSAPPQNLTLEVR
NSKSILLQWQPPPAGTQSGQITGYKIRYRRVARKSDVTESVAGTQLSQLIEGLERGTEYS
FRVAAMTVNGTGPATDWVSAETFESDLDESRVPEVPSSLHVRPLVTSIVVSWTPPENQDV
VVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAV
TRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKIT
DARFYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAH
GTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV
IEPVVGNRLTHQIQELTLDTPYFFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQAS
GSAGKGSRPMDLGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVF
CTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMT
DTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPP
QPVISAHPIHSLDPPHHHFHSGSLASPTRSFLQHQLSPWPLGSAMSHSDRADSTESVRNT
PSTDTMPAGSAVPSAELPEPEGPFLPAEEEPQGPPTAHVRPSHPLKSFAVPAVPSAAGPF
DPALPSTPLLTQQAPGHPLHAVKTASIGTLGRTRPPMPVVVPSAPEVQETTRMLEDSESS
YEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggagagcccggcggctcctcggctccctgtgcatcgcccttctcttcgcg
cagctcgcaccgaccggcgccgcggcgcggagcggctcccggagcctcctgacggaatcg
cttgtgagaaccttcactcctttctacttcctggtggagcccctggacgtgctggcagtg
cgagggatgtcggtgatcatgaactgctcggcgcagtgcgagaccccgccccggatcgag
tggaggaaggacggctccttcctcaacctcgtgtccgacgaccgccgccagctgctgccc
gatggatctttactgatcaacagcgtggtgcattccaagcacaataaacctgatgaggga
tattatcagtgtgtggcaactgtggacagcctggggaccatcgtgagcaggacagcaaag
ctcaccgtggcaggtctgcccaggttcacgagccagccggagcccacctgggtgcgccgc
gggggcagcgccgtgctgggctgcgaggtgacggccgagctggcgccgctgctgcgctgg
gagcgcgagcggcaggcgctgcccccggagccgcgcctgctgcagctgcccgggggggcc
ctgctgctcagcaacgcctcggacagcgacgcggggctctaccgctgcctgctcgacacc
cccggcacccccaagtacagcgacgaggccgagctcagagtcctgccagatgcggaggag
ccccagaagctggcgctgctgaagccgccctcatccctgagccgcctggccgggcagagc
gccctgttcccctgcgtggccgccgccttccctcctcccctggtcaggtggacacggaac
ggggaggagctccccagcgatgggtctggccggttccagctgctgccagggggggtgctg
gagatccgggatgtgaccgaggcggacgccgggaccttcacctgcatcgctgagagcggc
aatgacaccctggaggctcaggcagagctggcagtgcaagttgcccccacgttcctgaag
cgccccgccaacatctacgcccacgagtccatggacatcgtgtttgagtgcgaggtgacc
gggaagccaacgccgaccgtcaagtgggtcaagaacggggacgtggtgatccccagtgac
tacttcaaaatcgtgaaagaacataacctgcaagttttggggctggtgaagtctgatgaa
ggattctatcagtgcattgcagaaaacgatgttggaaatgcacaggctggagcccagctg
ataatacttgaccttgatgttgccatcccaacattacctcccacttcactgaccagtgcc
actaatgaccatctagcagcagccccagcgggacccctgccctcggccccgcgcgacgtc
gtggccaccctggtgtccacccgcttcatccggctcacctggcgcccgcccgcctccgac
ccgcacggcgacaacctcacctactccatcttctacaccaaggagggcatcaacagggaa
cgtgtggaaaacacgagtcgtcctggagagacacaggtgatgatccagagcctgatgcca
gagacagtttacgtgttccgcgtggtggcccagagccggcacggccccggcgagagctcg
gcaccgctcaaggtggcaacgcagcccgaggtccagctgcctggccctgctcccaacatc
cgtgccttctccagctcccccaccagtgtcaccgtcacctgggagacgccgctctcgggc
aacggcgacatccagaactacaaactctactacatggagaagggacagcacacagagcag
gatgtggacgtggcagggctgtcccacacggtggcagggctgaagaagttcaccgagtac
agcttccgcgtggtcgcctacaacaagcacggccccggcgtctccacccacgacgtcgtg
gtgcgcaccctgtcagacgtccccagtgctccaccccagaatctgacgctggaggtccgg
aattccaagagcatcctgctgcagtggcagccccctcctgccgggacccagagcgggcag
atcacaggctacaaaatccgctaccgccgagtggcccgcaagagcgacgtcaccgagagc
gtggcgggcacccagctctcccagctcatcgagggtttggagcggggcactgagtacagc
ttccgcgtggccgccatgaccgtcaacggcaccggccccgccaccgactgggtgtcagct
gagaccttcgagagcgacctggacgagagccgtgtgcccgaggtgcccagctccctgcac
gtgcgcccgctggtcaccagcatcgtggtgagctggaccccgcccgagaaccaggacgtg
gtggtcaggggctacgccatcggctacggcatcggcagcccccacgcccagaccatcaag
gtggactacaagcagagatactacaccattgagaacctggatcccagctcacactacgtg
ataaccctgaaagccttcaacaacgtgggagaggggatccccctgtacgagagcgccgtg
acccggccccactccgacacttccgaggttgatttgtttgttattaatgctccatacact
ccagtgccagatccgtctcccatgatgcccccggtgggagttcaggcttccatcctgagc
catgacaccatcaggatcacttgggcagacaactccctgcccaagaaccagaagatcacg
gacgcgcgcttctacaccgtccgctggaaaaccaacatccctgccaacaccaagtacaag
actgcaaatgccaccaccctgagctacctggtgacggggctgaagccaaacaccctctac
gagttctcagtgatggtgaccaagggcaggagatccagcacctggagcatgacagcacat
gggacaacctttgaattagtgccaacctccccgcccaaggacgtgactgtggtgagcaag
gagggcaagccccgcaccatcatcgtcaactggcagccgccctccgaggccaacggcaaa
atcacaggctacatcatctactacagcacggacgtcaacgccgagatccacgactgggtg
atcgagcccgtggtgggcaacaggctcacccaccagatccaggagctcaccctggacacc
ccctacttcttcaagatccaggcccgcaactccaagggcatggggcccatgtccgaggcc
gtgcagttccgcacccccaaagctgagtcctcagataaaatgcccaatgaccaagcctca
ggatctgctgggaaggggagccgccccatggacctgggccccgactacaaacccccgctg
ggaggcagtaacagtccccatggcagccccacatcccccctggacagcaacatgctgctg
gtgatcatcgtgtccgtgggcgtcatcaccatcgtcatcgtcgtcatcgtcgccgtcttc
tgcacgcgccgcaccacgtcccaccagaaaaagaaacgagccgcctgcaaatccgtgaac
ggctcccacaagtacaaggggaactccaaagatgtcaaacccccagacctttggatccat
catgagaggctggagctcaaacccattgataaatccccagatcccaaccccatcatgaca
gacacccccatccctcgcaactcccaggacatcaccccggtggacaactccatggacagc
aacatccatcaaaggaggaattcctacagaggacacgagtcagaggacagcatgtccacg
ctggcaggaaggaggggcatgaggcccaagatgatgatgccttttgattctcagccgcct
cagcctgtgattagtgctcatcccatccattccctcgacccccctcaccaccatttccac
tccggcagcctcgcctctccaacccgcagcttcctgcagcaccagctcagcccgtggccc
ctgggctctgccatgtcccattcggacagggccgactccacagagtccgtccggaacacg
cccagcacggacacgatgcccgcgggctcggccgtgcccagcgcggagctgccggagccc
gaggggccgttcctgcccgccgaggaggagccgcagggcccccccacggcccacgtgcgc
ccctcgcaccccctcaagagcttcgccgtgcccgccgtgcccagcgccgcgggccccttc
gaccctgccctgcccagcacccccctgctgacccagcaagcccctgggcaccccctgcac
gcggtgaagacggcgtccattggcaccctgggcaggacccggccgcccatgcccgtggtg
gtgcccagcgcccccgaggtgcaggagaccacacggatgctggaggactcggagagcagc
tacgagcccgacgagctgaccaaagaaatggcgcacctggaaggactcatgaaggacctg
aacgccatcaccacggcgtga
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