Agelaius tricolor (tricolored blackbird): 139597059
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Entry
139597059 CDS
T10815
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139597059 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
atrc03310
]
139597059 (RORA)
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139597059 (RORA)
Nuclear receptors [BR:
atrc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
139597059 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139597059
NCBI-ProteinID:
XP_071298121
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All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MESAPAAPDPAASEPGSSVSEAAAGARDTPVNLEPARKSDAPAPVRRQSYSSSSSSRGIS
VTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLID
RTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGE
AEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDING
IKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQI
TWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKA
GSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTED
EIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLR
ALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggctccggcagcccccgatccagcagccagtgagccgggcagcagcgtctcc
gaggcggccgccggcgccagggacaccccggtgaacctggagcctgcccggaaaagcgat
gcgccggctcccgtccgcaggcagagctactccagcagcagcagcagcagaggtatttct
gtaacaaagaagactcatacatctcaaattgaaattattccatgcaagatctgtggagac
aaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttcagg
aggagtcagcagagcaatgccacgtactcgtgtccccggcagaagaactgtctgatcgac
cgcaccagccggaaccgctgccagcactgccgcttacagaaatgccttgctgtggggatg
tcccgggatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagcctgtacgcc
gaggtgcagaaacaccgactgcagcagcagcagcgggatcaccagcagcagcccggagag
gcagaaccactcacaccaacatacaatatcaccaccaatgggttaacagagctacatgac
gacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagactctgcagtt
agcagcttctacttagacatacagccttctccagatcagtcgggtcttgatattaatgga
atcaaaccagaaccaatatgtgactacacaccagcatcgggcttcttcccttattgttct
tttacaaatggggagacctctccaactgtgtccatggcagaattagaacatcttgcacag
aatatttccaagtcacacatggaaacttgccagtacttgagagaggagttacagcagata
acatggcaaacttttctgcaggaagaaattgagaactatcagaacaagcaaagggaggta
atgtggcagttatgcgcagtcaaaataacagaagctatacagtatgtagtggaatttgcc
aaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgcttttaaaagca
gggtctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccagaacaacaca
gtctactttgatggcaagtatgctagcccagaggttttcaagtccttaggttgtgaagac
ttcattagctttgtgtttgaatttggaaaaagtttatgttctatgcacctgacagaagat
gagatagctttgttttctgcgtttgttttaatgtcagcagatcgctcatggcttcaggag
aaagtaaaaattgaaaaactccagcagaagatccagctagcacttcagcacgtcctacag
aagaaccaccgagaagatggaattctaacaaagttaatatgcaaagtgtctactttaaga
gcactgtgtggacgacatacagaaaagcttatggcatttaaagcaatatacccagacatt
gtgcgacttcattttcctccactttacaaggagttgttcacttcagagtttgagccagca
atgcaaattgatgggtaa
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