Agelaius tricolor (tricolored blackbird): 139597126
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Entry
139597126 CDS
T10815
Symbol
RBMX
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139597126 (RBMX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139597126 (RBMX)
Spliceosome [BR:
atrc03041
]
Common components
Common spliceosomal components
hnRNP proteins
139597126 (RBMX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_5
RRM_occluded
PHM7_cyt
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
139597126
NCBI-ProteinID:
XP_071298216
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGAR
GPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGG
PPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSR
DEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYG
GSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSS
SSRGAPRGGGRGGSRSDRGGGRSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcagatcgtcctgggaagctgttcattgggggcctgaacacagagactaat
gaaaaagcccttgaggctgtatttggcaaatatggacgcattgtggaagtccttttgatg
aaagatcgggaaacaaacaagtccagaggatttgcattcgtcacgtttgagagtccagca
gatgcaaaagatgctgccagagatatgaatggaaagtcattagatgggaaggcaattaaa
gtggaacaagcaaccaagccatcctttgaaagtggtggtaggcgtgggccaccgccccct
ccccgaagcagaggtcctcccaggggccttagaggcgcaagaggcggaagtggcgcgaga
ggaccaccttcaagagggagtcacttggggtcttctcgagggccacttcccatgaagagg
ggtccacctccacgaagtggaggccctccacctaaaagatctgcaccttcaggaccagtg
cgtagcagtagcatgggaggaagagctcctgtgtcacgtggaagagatggttacggtggt
cctccgcgcagagagccaatgccatcacggagagatgtctacatgtctccaagagatgat
ggctacagcactaaagacggttactcaagcagagattatcccagttccagggatacccgg
gactacgcaccacctccacgagactacgcatatcgtgattatggtcattccagttcacgt
gatgaatacccctccaggggatatagtctttcctcctatagcgatcgtgatggatacggt
ggtggacgtgacagagactactcggatcatccaagtggaggctcctacagagattcatat
gagagttacggtaactcacgtagtgctccacctgctcgagggcccccgccatcttatggt
ggaagcagtcgctatgatgattacggcagcacacgagatggatatggaagccgagaaagt
tactcaagcagcagaagtgatgtctactcaagtggccgtgatcgtgttggaagacaggac
aggggtcttcccccatccatggaaaggggctatccacctcctcgggattcttacagtagt
tcaagccgcggggcgcccagaggtggtggccgtggtggaagcagatccgatagaggtgga
ggcagaagcagatactaa
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