Agelaius tricolor (tricolored blackbird): 139597151
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Entry
139597151 CDS
T10815
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139597151 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atrc01009
]
139597151 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139597151 (PCDH11X)
Protein phosphatases and associated proteins [BR:
atrc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139597151 (PCDH11X)
Cell adhesion molecules [BR:
atrc04515
]
Cadherins
Protocadherins
139597151 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
139597151
NCBI-ProteinID:
XP_071298267
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGPDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPSSGA
SASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILG
HSDNCWMPSALTQFQQPNPSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQAGPRP
QFYNTCERHCAAEDPVKVIPLANFAASHPAPGAGSSTTFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcctggcagtcctgttggcctgcatcgtgttccaa
tctggcgcgcaggagaagaattacaccgtgcgggaagagctgcccgaaaatgtcctcatt
ggcaacctgctcaaggatctcaacctaacgctggaccccgacgtgcccctgtcctccccg
ctgcagttcaagctggtgtacaagaccggggacgtgcccctggtgagggtggaggagaac
acgggggagatcttcacggccgccaaccgcatcgaccgcgagaagctgtgcgccggcatc
ttcagcgagaaccgctgcttctacgaggtggaggtggccgtgctgcctgatgaggtgttc
aggctggtcaagatcaggttcctgatcgaggatataaatgacaacgccccccttttcccc
tcgacagtcattaacatctccatcccggagaacacggccattaattcccgctactccgtc
ccgtctgccatcgacccggacatcggggtgaacgggatccagcattatgagctgctcaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgaccagggtcaaaatgta
tttggtcttgacataactgagacacccgagggagacaagtggcctcaactgatagtccag
cagatcctggatagggagcagaaggacacctatgtgatgaagatcaaagttgaggacggc
gggagccccccaaggtccagcactgccatcctgcaggtgacggtgacggacgtcaacgac
aaccgcccggtgttcaaggagaacgacatcgaggtcagcgtgcccgagaacgcccccgtg
ggcacctccgtgtcccagctgcacgccaccgacgccgacctgggctccaatgcacagatc
cacttctacttcagcaaccagatctccagcctggccaagaggctctttgccatcgataac
accactgggctcatcaccatcagggagccgctggacagggaggagtcccccgtgcacaaa
ctgactgttctggcaagcgatggcagctccactccgtcaagagccacggtgactgttaat
gtcacagatattaatgacaatgtcccatcaatagacaccaggtacatcatcaacccggtg
aatgggacagtgctgttgtctgagaaggctccccttaatacaaaaattgctttgataaca
gtgatggacaaggacgctgaccagaatgggaaagttacctgttttacagaccatgatgtt
cctttcaggctaaaaccagtgtttgataatcagtttctcctggagacagccacgtttcta
gactatgaagctacacgggaatatgccatcaaaatagtggcttcagattcagggaagcct
cccttaaaccagtctgcaatgctcctgatcaaaattaaggatgaaaacgacaacgcccca
gtcttcacccagcccatcataggcctttccatccctgaaaacaacgctcctggtactcag
ctgaccaagatcagcgctacagatgctgacagcgggcggaatgccgagatcagctacatc
ctgggtcctgatgcacccccaattttcaacctggaccgccgcacaggcatcctgacagca
gtgagaaagctggacagagaaaagcaggacaggtactctttcactgtgctggctaaggat
aatgggatgccacctttgcagaccaatgctactgtgacggtgtcagtgctggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccagaaaacctgccc
atgtacggcacagtggggcttatcacagttacggatgctgacgcgggagacaacgctgca
gtcactctctctatcttaaatggtagagataatttcattatagatccactcactggtgta
ataaggcctaatattacctttgacagggagcagcaggggtcatacactttccaggtgaaa
gcggtggatggaggaagactgcagcgttcctcaactgccaaggtgaccatcaatgttgtt
gatgtaaatgataacaggcccgtttttgttatcccctcctctaattattcctatgagctg
gtcccaacgtcagccagcccggggtctgtagtcactaaagtctttgcagttgataatgac
acgggaatgaacgcagagctccgctatagcatcataggtgggaactccaggggcttgttt
accattgaccaattaacaggcaatatcactttgaaagagaaggtaattacatcagatcat
ggcctgcacagactggtgatcaaggtgaacgacctgggacagccggagtctctttacacc
attgctcttgtgcacttgtttgtgaacgagacggtcaccaacagctcctacgtgcaagag
ctggtgcgtaggaatatggaaacgccagttggccagaacattggggatggtgagataacc
ccgcagaccaatgattatgtcaagatcatcattgccattattgcaggcaccatgacagtt
attctggtaatttttgttaccgccttagtccggtgccgccagacgcccaggcacaaggtt
gtccaaaaaaataagcagagtggtgaatgggtttcccccaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccaaagagtctcctcctcaactttgtgact
attgaagaatccaagcctgatgatcctggccacgagcacataaatggcactttagacatt
cccgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaaacctgatagcccagacttagcaaagcactacaagtctgcttctccgcagcccacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaattg
cctctagataacacctttgtggtgggctgtgactcactttccaagtgctcatccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaagttggaaggccacaaactcctttgaaagaaaca
accctggagccctggactcagccacagccccagcgccgggtcaccttccacctgcccgac
ggctcccaggagagctgcagcgacagcgggctcggagaccacgagccctcgagcggggcc
agcgcctcccacccgctgcccctgggcttcccccaggacgagttctacgagcaggcgtcg
cccaacagccgcaccgagggagacggcaactccgaccccgagtccactatcgaagtgaac
ctgcagaaagctctggccgaagcctctgagaactgcacgcaggagtgcctcatcctcggc
cactccgacaactgctggatgccgtcggcgctgacgcagttccagcagcccaacccctcc
ttgccatcgtttggcttccagcaaggctggggccggggggccaggcccgagggacgccac
actctcgggaggcccctgccaaaggacgacagtgacaaaggccaggcagggcccaggccc
cagttctacaacacctgcgaaagacattgcgccgccgaggatcccgtcaaggtcatcccc
ctggcaaacttcgccgcctcccacccggcgccgggggctggcagcagcaccacgtttata
cacgagcaccagctgtga
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integrated database retrieval system
