Agelaius tricolor (tricolored blackbird): 139597377
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Entry
139597377 CDS
T10815
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139597377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139597377
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139597377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
139597377
NCBI-ProteinID:
XP_071298772
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MSQFSFGAPAPGGAFGLGAPRAAAATTTASSGFSFSAPAPASASTGFSFGSAAPAAGGSQ
PAGLFSFSRPGTAAQPSGFSFGSTSAAPAAPAAAAFPLGANTPKVTFGASTATPAPAVPG
GFSFGAPAATSTPSSQAAAPSGFAFGSAASSSSSSSTAPSGTPGGFTFSSGTTSQAGTAG
FSIGTAATPATSAGLSFGTAPAAAASTSTATLAAATPTAAPFSLGGQPTGLTFGAQPSTA
ATSTSTATLTTSTSQAPTLSFGAKLGVTSTAASTASTTSTTSVLGSTGPSLFASVATSSA
PASSSTTGLSLGATSTASTGTASLGTLGFGLKVPGTTAATTSTATGTTSASGFPLNLKPL
TTTGAIGAVTSTAATTTTTTASAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAW
DRMLIENGEKITSLHREVEKVKVDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTI
YLQHADEERERTYKLAENIDAQLKRMAQDLKDIIDHLNTSGGPADTSDPLQQICKILNAH
MDSLQWIDQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcagcttcggggcgcccgcgcccggcggcgccttcggcctgggcgcgccc
cgagccgccgccgccaccaccacggccagcagcggcttctccttctccgcgccggcgccc
gcctccgcctccaccggcttcagcttcggcagcgcggcgccggcggcgggcggcagccag
cccgccgggctcttctccttcagcaggccgggcacggccgcgcagccctccggcttcagc
ttcggctcgaccagcgcggcccccgccgccccggcagccgccgccttcccgctgggggca
aacaccccaaaagtgacctttggagccagcactgccactccagctcctgcagtcccgggg
ggcttttcctttggtgcccctgcggcaaccagcaccccctcgagtcaggcagcagccccg
tctggctttgcctttggctctgctgccagcagcagcagcagcagcagcacagctccctct
gggacaccaggaggcttcaccttctccagtggcaccacgagccaggcgggcacggccggg
ttcagcatcggcaccgcggccacgccggccacgtcggcagggctgagctttggcacggcc
cctgcggctgctgccagcaccagcacggccaccctggcagctgccaccccaacagcagcg
cccttcagcctcggggggcagcccacaggtctgacctttggggctcagccttcaacagca
gccaccagtacaagcacagcaacactgaccacaagcaccagccaggcccccaccctgagc
tttggagccaagctgggagtcacatccacagctgccagcacggcctccaccaccagcacc
acctcagtgctgggctccacggggccctccttgtttgcatctgtggcaacttcttcagcc
ccagcctcctccagcaccacgggcctctcactgggtgccacctccactgcttccactggg
acagccagtctgggaacacttggctttggattaaaggttcctggaaccacagctgccacc
acaagcactgccactgggacaacctctgcttctggctttcccttgaacctgaagccattg
actaccactggtgccattggagctgtgacctccacagctgccacaaccacaaccaccaca
gccagtgcccccccagtgatgacttatgcccagctggagagtttgatcaacaagtggagc
ctggagctggaggaccaagagaagcacttcctgcatcaggccacacaagtcaatgcctgg
gaccgcatgctgatcgagaatggggagaagattacttcactacacagagaagtagagaag
gtgaaggttgaccagaagagactggatcaggaactggacttcattctgtcccagcagaag
gagctggaggacttgctgacccctctggaggagtctgtgaaggagcagagcgggaccatc
tacctgcagcacgcggatgaggaacgggagaggacctacaaactggctgaaaacatcgat
gctcagctgaagcgcatggcacaggatctgaaggacatcattgatcacttgaacacatca
ggaggcccagcagacacgagtgaccctcttcagcagatctgtaaaattttgaatgcacac
atggattccttgcagtggattgaccagaattcagctgtgctgcagaggaaggtggaagag
gtgaccaaggtttgtgagagtcgccgcaaggagcaggagcgcagctttaggatcaccttt
gattga
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