Agelaius tricolor (tricolored blackbird): 139597394
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Entry
139597394 CDS
T10815
Name
(RefSeq) transcription factor SOX-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139597394
Transcription factors [BR:
atrc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139597394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139597394
NCBI-ProteinID:
XP_071298803
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MYSMLETEIKAPQPTPGSTGGNPAPGSTGKGGGGGGAGNGAGAGSDQDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYR
PRRKTKTLLKKDKYSLPGNLLAPGGGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQL
GYSQHPGMNSPQLQQMHRYDMTGLQYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSL
GSMGSVVKSEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDATDPSALQGSRLHSVHQ
HYQSAGTAVNGTVPLTHI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggagacggagatcaaggcgccgcagcccacgccgggcagcaccggg
ggcaaccccgctccggggagcaccggcaaaggcggcggaggcggcggggccggcaacgga
gcgggagcgggctcggaccaggaccgggtgaagcgccccatgaacgccttcatggtgtgg
tcccgcgggcagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatc
agcaaacgcctcggcgccgactggaagctgctgagcgacgccgagaagcggcccttcatc
gacgaggccaagcggctgcgggccgtgcacatgaaggagtatccggattacaaataccgg
ccccggaggaagaccaagaccttgctgaagaaggacaaatactcgctgcccggtaacctg
ctggccccgggggggggcaacgcggtgagcagccccgtcggggtggggcagaggattgac
acttatgcccacatgaacggctggaccaacggggcttactcgctgatgcaagaccagctg
ggctacagccagcacccgggcatgaacagcccgcagctgcagcagatgcaccgctacgac
atgacgggcctgcagtacagccccatgatgtccacggcccagacctacatgaacgccgcc
tccacctacagcatgtcccccgccgcctacggccagcagccctccacggccatgagcctg
ggctccatgggctccgtggtgaaatccgagcccagctcgccgcctccggccatcacttcc
cactcgcagagggcctgcctgggagacctgcgggatatgatcagcatgtacctgcccccc
ggcggggatgccacagacccttccgccctgcagggcagcaggttacacagcgtgcaccag
cactaccagagtgccgggactgccgtgaatggtaccgtaccactaactcacatataa
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