Agelaius tricolor (tricolored blackbird): 139597412
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Entry
139597412 CDS
T10815
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139597412 (RLIM)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139597412 (RLIM)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139597412 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
139597412
NCBI-ProteinID:
XP_071298842
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTLDHSSAGEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFSPPETRPAPQA
AGSSESTGASESTASGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADSSGSTPSHNVETAEPQSGGGGAAGNENADVSSGEVYEGGHEASSTSGARR
EGRNMRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagactccagtgataaaggaagtattgatcaatcagaagcccaacgtcag
agccagctggatcgcttggaccgagaagaagctttctatcagtttgtgaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacgacacgaagcgggcagcgaggaaaccag
tcctggagagcagtgagccggactaacccaaatagcggcgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacgaatccagaaactgagaatgagccatctgta
gagccttccaatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcagtgcagaggagctgacggct
gaggaggcttcccctcctagagggcagaggagagccaggagtaggagtccagagcagcgg
cggacgcgggctaggactgatagaagtaggtcacctattaatgcagtgagcgaggcccct
cgcaggtctcatcacaacacatcatctcaaacacttgaccactcctcagcgggcgaggct
gagggcagctctagaaccagacagcacgtgacgttaaggcagcacacagtggggactgag
gtgccaagtgaaaatgcagttctgttttccccccctgagacgaggcctgctcctcaagca
gcaggttcttcagaaagcaccggtgccagcgagtccacggcctctgggcagaggcctccc
accatagtgctggacctgcaggtgagaagagttcgcccgggcgagtaccggcagagggac
agcatcgccaacaggacccgctcgcgctcccagacccccaacaacacggtcacctacgag
agcgagcgcggaggcttccggcgcaccttctcccgctcggagcgggccggggtgagaact
tacgtcagcaccatcaggatccccatccgcaggatcctgaacacgggcctgagcgaaacc
acctcggtcgccatccaaaccatgctgaggcagatcatgacgggcttcggggagctcagc
tacttcatgtacagcgatagcgacgcggattccagtgggtccactcccagtcacaacgtg
gagactgctgagccgcagagcggaggcgggggcgccgcgggcaatgagaatgcagatgtt
agctcaggggaggtgtacgagggtgggcacgaggctagctcaacatctggtgccaggcgg
gaaggccgcaatatgaggggatcggtcacttttgaggaaagcggttctctaccattcctt
agccttgcacagtttttcttactcaacgaagatgacgatgaccaacccagaggactcacc
aaagaacaaattgacaacctagccatgaggaattttggtgagagcgacgctctgaaaacc
tgcagcgtgtgcatcaccgagtacacggagggcaacaagctccgcaagctgccgtgctcg
cacgagtaccacgtgcactgcatcgaccgctggctgtcggagaactccacctgccccatc
tgccgcagggcagtcctggcctctgggaacagggagagcgtggtctaa
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