Agelaius tricolor (tricolored blackbird): 139597614
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Entry
139597614 CDS
T10815
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
atrc00536
]
139597614 (SLIT3)
Glycosaminoglycan binding proteins [BR:
atrc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
139597614 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
EGF
Laminin_G_2
Laminin_G_1
LRR_9
LRRNT
hEGF
EGF_TEN
LRRCT
JAG1-like_EGF2
EGF_Teneurin
EGF_DL_JAG
LRR_EndoS
EGF_2
Laminin_G_3
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
139597614
NCBI-ProteinID:
XP_071299202
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MLSGGRSAFLCLGTILSFWSSVSWMPVGGCPHKCTCIASNVDCHGLGLKTVPRDIPRNAE
RLDLEKNNITRITKTDFTGLKNLRVLHLEENQISVIERGAFQDLKQLERLRLNKNKLQVL
PELLFQNTQKLTRLDLSENQIKGIPRKAFRGIIDVKNLQLDNNQISCIEDGAFRALRDLE
ILTLNNNNITHIPVTSFNHMPKIRTLRLHSNFLHCDCHLAWLSDWLRQRRTIGQFTFCLA
PVGLRGFLVAEVQKKDFVCSGPQSEPPSCSASSVSCPSACTCSNNVVDCRGRGLTEIPAN
LPEDIWEIRLEQNLIKIIPPGAFTQYKKLKRIDISKNQITDIAPDAFKGLKSLISLVLYG
NKITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFA
PLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPRRLANKRISQIKSKKFR
CSGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLTRLPTHLPEYTTDLRLNDNDI
SVLEAVGLFKKLPNLRKINLSNNKIKEIREGAFDGAAGVQELILTENQLEAVHGRMFRGL
TGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANS
FNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDVQDFTCDGNDESSCLLSPP
CPSQCTCVDSVVRCSNKGLRMLPKGIPKDVTELYLEGNHLPAVPKGLSAFRHLTLIDLSN
NSISVLANHTFSNMTQLSTLILSYNRLRCIPVHAFTGLRSLRVLTLHGNDISSVPEGSFN
DLVSLSHLALGTNPLHCDCHLRWLSEWVKAGYKEPGIARCRGPEAMVDRLLLTTPTHHFQ
CKEPVDLSVVSKCNPCLSSPCKNNGTCSSDPVELYQCTCPFGFKGRDCSVPINSCIQNPC
QNGGTCHLTEANKDGFSCSCPLGYEGERCEINPDDCEDNDCENNSTCVDGINNYVCLCPP
NYTGELCDEVINHCVPDLNPCQHESKCVPLDKGTRCECLPGYSGKHCEVDDDDCVGHKCR
HGAACVDAVNGYTCVCPQGFSGLFCETPPPMVLLQTSPCDNYECQHGAQCVVAQHEPVCR
CLAGFAGQRCEKLITVNFVGKDSYVELPPAKIRPQANISLQVATDKDNGILLYKGDNDPL
ALELYQGHVRLIYDTLSSPPTTVYSVETINDGQFHSVELVMLNQTLNLVVDKGAPKSLGK
LQKQSSVSLNTPLYIGGIPTSTGLSSLRQGADKTPNGFHGCIHDVRINNELQDFKDLPQQ
SLGVLPGCKSCNICKHGICRSLEKTSVICECHPGWTGPLCDQEIGDPCLNHKCLHGKCTA
AGAAYTCKCMEGYTGLYCDKKNNSSNPCRTLKCSHGQCKVSEHGEPYCECDPGYSGELCD
RAESLCQGDVIREVVRKQQGYTSCATASKVPRLECRGGCGGSGHCCVPLRSKRRKYFFQC
LDGSTFTEELERHVECGCSKCS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctggtgggagaagtgcgtttctgtgccttggaacgatcctgagcttttggagc
tccgtgagttggatgcctgttggaggatgcccgcataagtgtacgtgtattgcttccaac
gtggattgtcatggactgggactcaaaactgtgccgagggatattcccaggaacgcggag
agactggatctagaaaaaaataacatcacaagaatcacaaagacagacttcacggggctg
aagaatcttcgtgtcttacacttggaagaaaatcagatcagtgtgatagaacgtggagct
tttcaggacctgaaacaacttgaaaggctgcgtctgaacaagaataaattgcaagttctt
ccagagctgcttttccagaacacacagaagctaactaggctagacctgagtgaaaaccag
ataaaaggaatccctagaaaggcctttcgaggaatcattgatgtgaagaacttgcaactg
gacaacaaccagatcagctgcatcgaagatggagccttccgagcgctgcgcgacctggag
atccttaccctcaataacaacaacatcacccacattcctgttaccagcttcaaccacatg
ccaaagatcaggactctgcgcctgcactccaacttcctgcactgtgactgccacctggcc
tggctgtcggactggctgcgccagcgccgcaccattggccagttcaccttctgcctggcg
cccgtcggcctgcgcggcttcctcgtggcagaggtgcagaagaaggactttgtctgttct
ggcccccagtccgagccgccgtcgtgcagcgccagctccgtctcctgcccctctgcctgc
acctgcagcaacaacgtggtggactgcaggggcaggggcctgacagagatcccagccaac
ctccccgaggacatctgggaaatacgtttggaacaaaacctcatcaaaatcattccccct
ggagctttcacccagtacaagaagctgaagagaatagacatcagcaagaaccaaataact
gacattgcacctgatgcattcaaaggcttgaaatctctcatttcattagtgctctatgga
aacaagatcacggagattccccagggcctttttgatgatcttgtgtctctgcagctgctg
cttctcaatgccaacaagatcaactgcctgagggtaaacacgttccaaggtctgcataat
ctcaaactgttatctctttatgacaacaaactgcagaccatcagcaaggggctctttgca
cctctgcgatcgatccagactctccatttagctcagaacccatttgtgtgcgactgccat
ctgaagtggctggctgattacctgcaggacaatcccatcgagacgagcggcgcgcgctgc
agcaatccccgtcgccttgccaacaaacgcatcagccagatcaagagcaagaagttccgc
tgctcaggctcagaggattacagaagtaaattcactgggaagtgcttcatggacctcgtg
tgtcccgagaagtgtcgctgtgaggggacagtggtggactgctccaaccagaaactcacc
cggctgcccacccacctccccgagtacaccactgacctgcgtctcaatgacaatgatatt
tctgttttggaagctgttggactcttcaagaaattgcccaacctcaggaaaataaacctg
agcaacaacaagatcaaggagatccgggagggcgcgttcgacggcgccgcgggcgtgcag
gagctgatcctgacggagaaccagctggaggccgtgcatggcaggatgttcaggggcctc
acggggctgaagacgctgatgctgaggagcaactccatcagctgtatcaacaacgacacc
tttgctggcctgagctcagtgaggctcctgtctctgtatgacaatcacatcagcaccatc
acccctggagccttcagcactctggtctctctgtccacaattaatttgctggctaattcc
tttaattgtaactgccatttggcctggctggggaaatggctgaggaagaagagaattgtc
agtggaaatccacgctgcttgaagccctttttcttgaaggatattccaatccaagatgta
gatgtccaggacttcacctgtgatggtaatgatgagagcagctgcctgctttcccctcct
tgtccttcccagtgcacctgcgtggactccgtggttcgctgcagcaacaaagggctgcgg
atgctgcccaaggggattcccaaggatgtgactgagctatacttggaaggaaaccatctg
cctgctgtgccgaaggggctctctgccttcagacacctgacactgattgatttgagcaac
aacagcatcagtgtcttggccaatcacaccttcagcaacatgactcagttatcgacactc
atcctgagttacaacaggctccggtgcatccccgtccacgccttcaccgggctccgctcg
ctgcgagtgctgacactccatggaaatgacatttccagtgttcctgagggatctttcaat
gacctggtgtccctgtcccatctggctctgggcaccaaccccctgcactgcgactgccac
ctgcgctggctctccgagtgggtcaaggcgggctacaaggagccgggcatcgcgcgctgc
cgcggccccgaggccatggtggacaggctgctgctcaccacgcccacgcaccacttccag
tgcaaagagcccgtggatctcagtgtggtgtccaagtgcaacccctgcctctccagcccc
tgcaagaacaatgggacatgcagcagtgaccccgtggagctctaccagtgcacctgccct
tttgggttcaagggtcgagactgcagtgtgcccattaattcctgcattcagaatccatgt
cagaatggagggacctgccacctcacagaagcaaataaagatggattcagctgctcttgt
cctcttgggtatgagggggagaggtgtgaaataaacccagatgactgtgaagataatgac
tgtgagaataactctacatgtgtggatgggatcaacaactatgtgtgtctctgccctcct
aattacacaggtgaactgtgtgatgaggtgattaaccactgtgttcctgatctaaatccc
tgccagcatgagtccaaatgtgttcccctggacaaaggaaccagatgcgagtgcctgccg
ggctacagcggcaagcactgtgaagtggatgatgatgactgcgtgggccacaagtgccgc
catggagccgcctgcgtggacgcggtcaatggctacacctgcgtgtgcccgcagggcttc
agtggcctgttctgcgagacgccgccgcccatggtgctgctgcagacgagtccgtgtgac
aattacgagtgccagcacggcgcgcagtgcgtggtggcgcagcacgagcccgtgtgccgc
tgcctggccggcttcgcggggcagcgctgcgagaagctcatcaccgtcaacttcgtgggc
aaggactcctacgtggagctgccccccgccaaaatccgcccccaggccaacatctccctg
caggtagccacagacaaggacaatggcatcttactgtacaaaggagacaatgatcctttg
gctctggagctgtaccaaggacatgtgaggctcatctatgacaccctgagctccccaccc
accacagtatacagtgtggaaacaataaatgatgggcagtttcatagtgtggaactcgtg
atgctgaatcaaactctgaacctggtggtggacaagggggctcccaagagtctgggaaag
ctccagaagcagtcttctgtcagcctcaacacacccctctacattggagggatcccaacc
tccactggattatcatccctgcgccagggtgcagacaagacaccaaatggttttcatggc
tgcattcacgatgtcaggatcaacaacgagctgcaggatttcaaggatttaccccagcag
tccctgggagtccttcctggctgcaaatcctgtaacatctgcaagcacgggatctgccgc
tccctggagaaaaccagtgtgatttgtgaatgtcaccccggctggacgggccctctgtgt
gaccaggaaattggagatccttgtcttaaccacaagtgtctgcatggcaagtgcacagct
gctggtgctgcttacacctgtaagtgcatggagggctacacgggcctctactgtgacaag
aagaacaattcctcaaacccctgcaggactttgaaatgcagccacgggcagtgcaaggtc
tcggagcacggggagccctactgtgaatgtgacccgggctacagcggagagctctgtgac
agagcagagagcctgtgccaaggagacgtcatccgggaggtggtgcgcaagcagcagggc
tacacctcgtgcgccacagcctccaaggtgccgcggctggagtgccgcgggggctgcggc
ggcagcgggcactgctgcgtgcccctgcgcagcaagaggaggaaatacttcttccagtgc
ctggatggctccaccttcacggaggaactggagagacacgtggagtgcggctgctcaaag
tgctcgtaa
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integrated database retrieval system
